mRNA_Ecto-sp6_S_contig98.18751.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: A0A6H5KFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP0_9PHAE) HSP 1 Score: 192 bits (489), Expect = 2.920e-56 Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = -2
Query: 42 NQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAPGCAA 314
QGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAPGCAA
Sbjct: 411 TQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAPGCAA 501
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: A0A7S3Y620_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y620_HETAK) HSP 1 Score: 114 bits (284), Expect = 2.630e-28 Identity = 49/81 (60.49%), Postives = 65/81 (80.25%), Query Frame = -2
Query: 72 NQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKS 314
+QGW+ FFFEFEA+W+ +AAG + SSCL+G+ G LYDIT+F+ HPGSPETL+ENAG D ++FF +VGHS AR LM++
Sbjct: 106 SQGWKRFFFEFEASWINMVAAGHDTLSSCLIGIEGGLYDITNFIDLHPGSPETLLENAGRDVTQFFNEVGHSATARRLMRN 186
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: A0A7S3Y614_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y614_HETAK) HSP 1 Score: 114 bits (284), Expect = 6.320e-28 Identity = 49/81 (60.49%), Postives = 65/81 (80.25%), Query Frame = -2
Query: 72 NQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKS 314
+QGW+ FFFEFEA+W+ +AAG + SSCL+G+ G LYDIT+F+ HPGSPETL+ENAG D ++FF +VGHS AR LM++
Sbjct: 165 SQGWKRFFFEFEASWINMVAAGHDTLSSCLIGIEGGLYDITNFIDLHPGSPETLLENAGRDVTQFFNEVGHSATARRLMRN 245
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: A0A7S2FKK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKK9_9STRA) HSP 1 Score: 112 bits (281), Expect = 4.050e-27 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = -2
Query: 69 WREFFFEFEATWLEWLAAGQNFES---SCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSL 305
WR FFFE+E +WLEW AGQN E+ CL+GV+G +YD++ F+ HPG+PET+++NAG D +EFFEDVGHS AR MKSL
Sbjct: 291 WRRFFFEYEESWLEWSCAGQNVENVNQGCLIGVYGTVYDVSFFLDEHPGTPETILDNAGGDTTEFFEDVGHSTSARRRMKSL 372
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: A0A7S1ZBN1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBN1_TRICV) HSP 1 Score: 99.8 bits (247), Expect = 2.900e-23 Identity = 47/88 (53.41%), Postives = 61/88 (69.32%), Query Frame = -2
Query: 42 REFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGL-MKSLDSLAPGCAA 302
++F+F F TWL +L AGQN CLVG+HG ++DITDF+ HPGSPETL +G A+ FFED+GHS+ AR + MK + GCAA
Sbjct: 77 KDFYFSFGETWLNYLLAGQNTRDRCLVGLHGHVFDITDFVESHPGSPETLYIQSGRSATSFFEDLGHSVGARKMAMKLCLVIDQGCAA 164
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: W7TKW6_9STRA (Cytochrome b5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKW6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.000e-22 Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = -2
Query: 54 GWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAP 308
GWR F+ FE W WL AG+N E SC VG+ G +YD+T F+ HPGS ET++ NAG DA+ FF+DVGHS AR +M + P
Sbjct: 386 GWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCIVPP 470
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: A0A7S2SV73_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV73_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.020e-21 Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = -2
Query: 54 WREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAP 305
WR FF+EF+ W++W G N + CLV +HG +YD+T F HPGS ETL++NAG DA+ FE VGHS AR M L + P
Sbjct: 317 WRRFFYEFDEAWMDWALVGMNTPARCLVALHGTIYDLTQFKQEHPGSVETLLDNAGGDATPMFEGVGHSRVARRQMAQLVRIEP 400
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: K8YSQ2_NANGC (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSQ2_NANGC) HSP 1 Score: 90.1 bits (222), Expect = 4.270e-21 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = -2
Query: 102 WREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGH 305
WR F+ FE W WL AG+N E SC VG+ G +YD+T F+ HPGS ET++ NAG DA+ FF+DVGH
Sbjct: 40 WRHFYSVFELEWAAWLCAGRNREESCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGH 107
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: A0A7S2K3U1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3U1_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.610e-20 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = -2
Query: 87 REFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDAR 302
+E +F F WL+W AG+N E CL G+HG ++++T F+ HPG+PETLM AG DA+++FED+GHS+ AR
Sbjct: 339 KELYFRFGEAWLDWAIAGKNSEEQCLAGLHGSVFNLTSFLESHPGTPETLMMQAGRDATKYFEDIGHSMAAR 410
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Match: A0A7S0C0K9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0K9_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 5.690e-20 Identity = 39/77 (50.65%), Postives = 56/77 (72.73%), Query Frame = -2
Query: 87 QNQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDAR 317
Q+ ++ +F F W+++ AGQN C VG+HG +YDI+DF+ HPGSPETL+ +AG DAS++FE++GHSL AR
Sbjct: 345 QSLSMKDVYFMFSDCWVDYCIAGQNTMERCFVGLHGNVYDISDFIEHHPGSPETLLMHAGRDASKYFEELGHSLTAR 421 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig98.18751.1 >prot_Ecto-sp6_S_contig98.18751.1 ID=prot_Ecto-sp6_S_contig98.18751.1|Name=mRNA_Ecto-sp6_S_contig98.18751.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=106bp RQFDPPPPAPAAAAAAQPGARLSSDFMRPRASRECPTSSKNSEASAPAFSback to top mRNA from alignment at Ecto-sp6_S_contig98:171625..171942+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig98.18751.1 ID=mRNA_Ecto-sp6_S_contig98.18751.1|Name=mRNA_Ecto-sp6_S_contig98.18751.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=318bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:171625..171942+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig98:171625..171942+ >mRNA_Ecto-sp6_S_contig98.18751.1 ID=mRNA_Ecto-sp6_S_contig98.18751.1|Name=mRNA_Ecto-sp6_S_contig98.18751.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=318bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:171625..171942+ (Ectocarpus species6 EcLAC_371)back to top |