mRNA_Ecto-sp6_S_contig96.18637.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig96.18637.1
Unique NamemRNA_Ecto-sp6_S_contig96.18637.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: D7FJP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP5_ECTSI)

HSP 1 Score: 551 bits (1421), Expect = 4.720e-197
Identity = 287/294 (97.62%), Postives = 289/294 (98.30%), Query Frame = 1 
Query:  139 MASSAGDDATLRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGDLSDSIMPKLASYTKSALAGRQTVAKFRQDAPPDAVRLYLVNVRLPNVGTDLLITVNVPCPDQDTAVRTMAGAECFCSGPSRHTAGANEEISTGAPLVDAYKTSETASGAHAAADGTAAGTDKPFKSAADVSPEATVDGVGGVDKPEDSGEIEAGVGEGKGEKHSPPGGEDDVDLGVAALRTLLQSFAILDWSLFG 1020
            MASSAGDDATLRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASK+DGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGDLSDSIMPKLASYTKSALAGRQTVAKFRQDAPPDAVRLYLVNVRLPNVGTDLLITVNVPCPDQDTAVRTMAGAECFCSGPSRHTAGANEEISTGAPL+DA KTSETASGAHAAADGTAAGTDKPFKSAAD SPEATVDGVGGVDKPE SGEIEAGVGEGKGEKHS PGG DDVDLGVAALRTLLQSFAILDWSLFG
Sbjct:    1 MASSAGDDATLRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKEDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGDLSDSIMPKLASYTKSALAGRQTVAKFRQDAPPDAVRLYLVNVRLPNVGTDLLITVNVPCPDQDTAVRTMAGAECFCSGPSRHTAGANEEISTGAPLIDANKTSETASGAHAAADGTAAGTDKPFKSAADFSPEATVDGVGGVDKPEGSGEIEAGVGEGKGEKHSSPGGGDDVDLGVAALRTLLQSFAILDWSLFG 294
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: K3WBQ5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBQ5_GLOUD)

HSP 1 Score: 112 bits (280), Expect = 3.440e-26
Identity = 68/164 (41.46%), Postives = 105/164 (64.02%), Query Frame = 1 
Query:  172 RKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGD--LSDSIMPKLAS-YTKSALAGRQTVAKFRQD-APPDAVRLYLVNVRLPNVGTDLLITVNVPCPDQDTAVRTMAGA 651
            R LFGGA+ C +P  + DVS  RQVPD+QEVFA+ +    +++E+L +E+D+  DE       SAR FF+++AA+NG +           L+ +  P +A+ +T S L G Q VAKF++D +  + VR+YL N+RLP+V TD++I+V+VP   Q +A  + AG+
Sbjct:    3 RALFGGALSCAIPEGFADVSSFRQVPDNQEVFANAQTDQCVIVELLQYESDVCDDE-------SARFFFNEIAASNGCSPDDVSILHSELLAANDGPAIAAAHTNSILVGDQRVAKFKEDESAKNVVRVYLGNIRLPSVTTDVVISVSVPL--QISAASSSAGS 157
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: W7TBW4_9STRA (Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBW4_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.060e-25
Identity = 72/171 (42.11%), Postives = 99/171 (57.89%), Query Frame = 1 
Query:  148 SAGDDATLRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGA-SARHFFDDLAAANGATSSACDFCGDLSD-SIMPKLASYTKSALAGRQTVAKFRQ-DAPPDAVRLYLVNVRLPNVGTDLLITVNVPCPDQDTAVRTMAGA 651
            S  +      LFGGA+   LPA++   SD+RQVPD+QEVF       S+++E+L  E D        K+G  +A +FF+DLA  N A ++   +  DLS  S++P LA+Y   AL G QTV+KF   DA    VR+YLVNVRL   GTD+L+T+N+P   Q  A  +   A
Sbjct:    7 SISEKVRSHALFGGAITISLPASFSSASDIRQVPDNQEVFIDDASDASLILELLDLERD--------KEGLEAATYFFNDLAEHNDAQNATIQYKEDLSGTSLVPNLAAYPTYALVGTQTVSKFHAADAALLPVRIYLVNVRLQQTGTDVLLTLNLPALAQAPAAASFNAA 169
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: A0A5D6XW54_9STRA (FERM domain-containing protein n=2 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW54_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.320e-23
Identity = 63/159 (39.62%), Postives = 97/159 (61.01%), Query Frame = 1 
Query:  163 ATLRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACD--FCGDLSDSIMPKL-------ASYTKSALAGRQTVAKFRQ-DAPPDAVRLYLVNVRLPNVGTDLLITVNVP 609
            +T R+LFGGA+ C +P ++ DVSD RQVPD+QEVFA  +    +++E+L  EA +       +D  SAR FF+++A+ANG   +  +      LS ++   L       A+   S + G Q VAKFR+ D   + VR++L N+RLP+  TD+++TV+VP
Sbjct:    2 STTRELFGGAISCSIPESFADVSDFRQVPDNQEVFADAQSDQCVIVELLQREAGV-------RDEDSARFFFNEVASANGCAPADVEERHAELLSAAVAAPLLGADNRAAAAVVSVVVGDQRVAKFREGDGAKNVVRVFLANIRLPSAATDVVLTVSVP 153
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: M4B727_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B727_HYAAE)

HSP 1 Score: 103 bits (257), Expect = 7.710e-23
Identity = 62/153 (40.52%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  169 LRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGDLSDSIMPKL-----ASYTKSALAGRQTVAKFRQD-APPDAVRLYLVNVRLPNVGTDLLITVNVP 609
            LR LFGGA+ C +P  + DVS  RQVPD+QEVFA+     S++IE+L +E +++       D  S R+FF++LA +NG            +D +         A +T   + G Q VAKF++D A  + VR+YL NVRLP V TD+++TV+ P
Sbjct:    2 LRPLFGGALSCDIPEGFADVSSFRQVPDNQEVFANAATDQSVIIELLQYEENVS-------DAESGRYFFNELAQSNGCGPDEVTVLLRETDEMQHMSHVSIDAPHTTQLIVGDQHVAKFKEDDAAKNVVRVYLGNVRLPGVTTDVILTVSTP 147
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: A0A2R5GLU9_9STRA (Ran guanine nucleotide release factor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLU9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.880e-22
Identity = 65/177 (36.72%), Postives = 103/177 (58.19%), Query Frame = 1 
Query:  172 RKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFC--GDLSDSI--MPKLA--SYTKSALAGRQTVAKFRQDAPPDAVRLYLVNVRLPNVGTDLLITVNVPCP---DQDTAVRTMAGAECFCSGPS 675
            R+LFGGA+   LPAA+ DVS +R+VPDHQEVFA +    SI++EVL   A       +  +  + ++FF+DLA ANG+ ++  ++   G  + S+  + K+A  +   + + G Q VAKFR+ A  + +R++L N+RLP   TD+LI++N P     +  +A    A      + PS
Sbjct:   32 RELFGGAITASLPAAFADVSTVREVPDHQEVFADQNTDRSIIVEVLELTA-------SESNETAGKYFFEDLAGANGSEATVIEYSEVGVPATSVPCLDKVADPAAASNVVIGTQVVAKFRESAK-NTIRVFLCNIRLPKYTTDILISLNAPVKVSAESSSAASLQAAGAALDADPS 200
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: A0A662WTL8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTL8_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.050e-22
Identity = 61/159 (38.36%), Postives = 94/159 (59.12%), Query Frame = 1 
Query:  169 LRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGD------LSDSIMPKLA-----SYTKSALAGRQTVAKFRQ-DAPPDAVRLYLVNVRLPNVGTDLLITVNVP 609
            L  LFGGA+ C +P  + DVS  RQVPD+QEVFA+      +++E+L FE+ ++       D ASA++FF+++A ANG        CG       LS+ +  K A      ++ + + G Q VAKF++ D   + VR+YL N+RLP V TD++++V+ P
Sbjct:   27 LHPLFGGALSCEIPEGFADVSSFRQVPDNQEVFANAATDQCVIVELLQFESSVS-------DAASAQYFFNEIAQANG--------CGPDEVTVLLSEQVDAKNAPVISGEHSTTVIVGDQRVAKFKEGDDAKNVVRVYLGNIRLPGVTTDVVLSVSAP 170
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: A0A7S3MHE7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHE7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.130e-21
Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 1 
Query:  157 DDATLRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSAC--DFCGDLSDSIMPKLAS-YTKSALAGRQTVAKF--RQDAPPDAVRLYLVNVRLPNVGTDLLITVNVP 609
            + A+ R LFGGA+E  L A Y+DVSD+RQVPDHQEVF  K + +SI++E+L +E D+     A       RH+++DL   N A  +    +      +S +P L     K A+ G+QTV K+  R     D + +  V VRL NVGT+L I++N+P
Sbjct:   13 NTASKRDLFGGAIEANLGADYLDVSDVRQVPDHQEVFIHKDNEVSIIVELLQYENDLEDSIGA------VRHYYNDLVEVNEAAENKILSEAVLTAEESFLPNLGKDVVKMAIVGKQTVGKYSTRPGMQIDHIYVVFVLVRLVNVGTELFISMNIP 162
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: A0A0P1AXJ4_PLAHL (RAN guanine nucleotide release factor n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXJ4_PLAHL)

HSP 1 Score: 99.4 bits (246), Expect = 2.720e-21
Identity = 60/158 (37.97%), Postives = 93/158 (58.86%), Query Frame = 1 
Query:  169 LRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGDLSDSIMPKLASYTKSA----------LAGRQTVAKFRQ-DAPPDAVRLYLVNVRLPNVGTDLLITVNVP 609
            LR LFGGA+ C +P  +VDVS  RQVPD+QEVFA+      +++E+L FE  ++       D  SAR+FF+++A +NG        CG    +++ +  + TK            + G Q VAKF++ D   + VR+YL N+RLP+V TD++++V+ P
Sbjct:    2 LRLLFGGALSCEIPEDFVDVSSFRQVPDNQEVFANATTDQCVIVELLQFEESVD-------DNQSARYFFNEIAQSNG--------CGPDEVAVLLEEKTDTKLTGVDVPHIMRIIVGDQCVAKFKEGDHAKNVVRVYLGNIRLPSVTTDVVLSVSAP 144
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BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Match: A0A329SMJ2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SMJ2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 3.980e-21
Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 1 
Query:  169 LRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGD------LSDSIMPKLAS------YTKSALAGRQTVAKFRQ-DAPPDAVRLYLVNVRLPNVGTDLLITVNVP 609
            LR LFGGA+ C +P  + DVS  RQVPD+QEVFA+      +++E+L +E  +        D  SA +FF+++A +NG        CG       L + +  +LA       YT   + G Q VAKF++ D   + VR+YL N+RLP V TD++++V+ P
Sbjct:    2 LRPLFGGALSCEIPEGFADVSSFRQVPDNQEVFANATTDQCVIVELLQYEESV-------ADAQSAHYFFNEIAQSNG--------CGPDEVTVLLEEKVDGELAPTDIDAPYTTQLIVGDQRVAKFKEGDHAKNVVRIYLGNIRLPGVTTDVVLSVSAP 146
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJP5_ECTSI4.720e-19797.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3WBQ5_GLOUD3.440e-2641.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W7TBW4_9STRA1.060e-2542.11Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich n=1 T... [more]
A0A5D6XW54_9STRA3.320e-2339.62FERM domain-containing protein n=2 Tax=Pythium bra... [more]
M4B727_HYAAE7.710e-2340.52Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A2R5GLU9_9STRA1.880e-2236.72Ran guanine nucleotide release factor n=1 Tax=Hond... [more]
A0A662WTL8_9STRA7.050e-2238.36Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A7S3MHE7_9STRA2.130e-2140.38Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A0P1AXJ4_PLAHL2.720e-2137.97RAN guanine nucleotide release factor n=1 Tax=Plas... [more]
A0A329SMJ2_9STRA3.980e-2137.50Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig96contigEcto-sp6_S_contig96:358422..360983 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score553.9
Seed ortholog evalue4.5e-155
Seed eggNOG ortholog2880.D7FJP5
Preferred nameRANGRF
Model size1023
KEGG koko:K17495
Hectar predicted targeting categoryother localisation
GOsGO:0001947,GO:0002009,GO:0002027,GO:0002028,GO:0003007,GO:0003008,GO:0003013,GO:0003015,GO:0003143,GO:0003254,GO:0003674,GO:0005085,GO:0005087,GO:0005088,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005791,GO:0005829,GO:0005886,GO:0005901,GO:0005911,GO:0006403,GO:0006405,GO:0006406,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006888,GO:0006913,GO:0006937,GO:0006942,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007368,GO:0007389,GO:0007507,GO:0008015,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008536,GO:0008565,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009987,GO:0010467,GO:0010646,GO:0010959,GO:0010968,GO:0012505,GO:0014704,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016192,GO:0016247,GO:0016973,GO:0017016,GO:0017038,GO:0017080,GO:0019899,GO:0022898,GO:0023051,GO:0023052,GO:0030054,GO:0031110,GO:0031113,GO:0031267,GO:0031291,GO:0031503,GO:0031974,GO:0031981,GO:0032271,GO:0032409,GO:0032412,GO:0032501,GO:0032502,GO:0032527,GO:0032879,GO:0032880,GO:0032886,GO:0032970,GO:0033036,GO:0033043,GO:0033365,GO:0034504,GO:0034613,GO:0034762,GO:0034765,GO:0035050,GO:0035239,GO:0035295,GO:0035556,GO:0042391,GO:0042592,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043269,GO:0044057,GO:0044087,GO:0044291,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044853,GO:0045121,GO:0045184,GO:0046907,GO:0048193,GO:0048513,GO:0048518,GO:0048562,GO:0048568,GO:0048598,GO:0048729,GO:0048731,GO:0048856,GO:0048878,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051020,GO:0051028,GO:0051049,GO:0051128,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051270,GO:0051493,GO:0051641,GO:0051649,GO:0051716,GO:0055117,GO:0060047,GO:0060341,GO:0060429,GO:0060562,GO:0061371,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070507,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072359,GO:0072594,GO:0086004,GO:0090226,GO:0090257,GO:0098589,GO:0098590,GO:0098772,GO:0098805,GO:0098857,GO:0098900,GO:0098901,GO:0098902,GO:0098905,GO:0098909,GO:1900825,GO:1902305,GO:1902903,GO:1903076,GO:1903078,GO:1903115,GO:1903522,GO:1903779,GO:1903827,GO:1903829,GO:1904062,GO:1904375,GO:1904377,GO:1905475,GO:1905477,GO:2000008,GO:2000010,GO:2000649
Exons4
EggNOG free text desc.regulation of microtubule nucleation by Ran protein signal transduction
EggNOG OGsKOG3329@1,KOG3329@2759
Ec32 ortholog descriptionMog1/PsbP, alpha/beta/alpha sandwich
Ec32 orthologEc-06_010710.1
Cds size885
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350590.0790365-CDS-Ecto-sp6_S_contig96:358421..3588811682350590.0790365-CDS-Ecto-sp6_S_contig96:358421..358881Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 358422..358881 -
1682350590.088398-CDS-Ecto-sp6_S_contig96:359551..3596681682350590.088398-CDS-Ecto-sp6_S_contig96:359551..359668Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 359552..359668 -
1682350590.0960298-CDS-Ecto-sp6_S_contig96:360133..3603491682350590.0960298-CDS-Ecto-sp6_S_contig96:360133..360349Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 360134..360349 -
1682350590.10348-CDS-Ecto-sp6_S_contig96:360753..3608451682350590.10348-CDS-Ecto-sp6_S_contig96:360753..360845Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 360754..360845 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350590.111114-UTR-Ecto-sp6_S_contig96:360845..3609831682350590.111114-UTR-Ecto-sp6_S_contig96:360845..360983Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig96 360846..360983 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig96.18637.1prot_Ecto-sp6_S_contig96.18637.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig96 358422..360845 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig96.18637.1

>prot_Ecto-sp6_S_contig96.18637.1 ID=prot_Ecto-sp6_S_contig96.18637.1|Name=mRNA_Ecto-sp6_S_contig96.18637.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=295bp
MASSAGDDATLRKLFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKKDGI
SIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGDL
SDSIMPKLASYTKSALAGRQTVAKFRQDAPPDAVRLYLVNVRLPNVGTDL
LITVNVPCPDQDTAVRTMAGAECFCSGPSRHTAGANEEISTGAPLVDAYK
TSETASGAHAAADGTAAGTDKPFKSAADVSPEATVDGVGGVDKPEDSGEI
EAGVGEGKGEKHSPPGGEDDVDLGVAALRTLLQSFAILDWSLFG*
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mRNA from alignment at Ecto-sp6_S_contig96:358422..360983-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig96.18637.1 ID=mRNA_Ecto-sp6_S_contig96.18637.1|Name=mRNA_Ecto-sp6_S_contig96.18637.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2562bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:358422..360983- (Ectocarpus species6 EcLAC_371)
CCAATTCCCAACCAACCAGCGTCCTCTTGATGCAGCTACAGGAGTACTCC
GTCAGGTGATCTGATCGAACAGCCGTGGACAGGACACTTGAGGCGTGAGG
CGCCACTACATTATATTTGGAGTTGAAGACAAAAAACAATGGCGAGCAGC
GCCGGCGATGATGCCACCCTCCGGAAGCTGTTCGGAGGCGCGATGGAGTG
CCTGCTGCCGGCAGCGTACGTGGACGTCAGGTTGGTGGGCGTGCCGTTGA
CTGACAGAGGGCTGCGGGGGTGGAGGTCTAATGCTACTACGTACGTTGCA
TATACAATTATGTTTAGCGTCACTCCTTTCACACGCTGTGGGCATGGTGC
GGGGTGATGGGAATGGGGCGGCAGTAGACGACAGGAGTACATCGTAGTTT
CGAGAGAACGATGTTCGCTAGGTGATGGATGTGACATGTCCTACGTGCAT
CAAGGGCAGTGGTGGATTTAGAGCCATCGTGATAACCCGCGGCTTTAGCT
TTTCAAGTCCTTTGGTGTACACGATGCCGCTCGTATGCACTGCTTTTCCT
GGCTAACATACATGCGCCTCTTACCCTTCAACCTTCTCTTCTCCTCGACC
CCGCTCTCCCACCACCCTCCCCTCTCCACCCCAGTGACCTTCGACAAGTA
CCCGACCACCAGGAGGTATTTGCCAGCAAGAAGGACGGAATCAGCATTGT
CATTGAAGTTCTATCCTTTGAGGCCGACATCAACATGGACGAACAAGCCA
GGAAAGACGGTGCAAGTGCGCGACATTTTTTCGACGATCTTGCGGCGGCT
AACGGGGCGACGAGCTCTGCCTGCGATTTTTGCGGCGATCTGAGCGACAG
GCAAGACTAGAGCCGGCGGTGAACGGCGGGAGTTGTGTACATTTTGCGCA
TGTTATGCAAGTACTTGCTTCTGGGCTACTCGCGACAAACCTAAGCGCCT
CTGAATGTGTAGGGATATAGCATAGTGGCAATGACGCAGGTGGTGTAGGC
TGTCCACAAGTTTATGGAGGGGGACCCTCGGCGCTGAGTTCATGGTGTCA
ATGGAAGCGCTAGCACGTCAACATCAACCAATTCATATTGGGCAGTTTCA
TTTGTCCCCTCTCACGCGCTTGTCTAAGTCAACCCCACACAAATCCCAGT
CCTGTTCCATGTGCATCCACCCGAAGGCATCCAACACATTGTATTGAAGT
CAAATTCCTCGGCCTAGATTTTTCTGCGGAAGACGGTGTGAACGAAAGAA
CACTGGGCGAATCAACTATTAATACATATTTCCTGTTACTCTGATCTCGT
TGTTTCGGCCAACAGCATCATGCCGAAGCTCGCATCGTACACCAAGTCAG
CCCTGGCAGGCCGTCAGACGGTAGCGAAGTTTCGTCAAGACGCTCCTCCC
GACGCTGTTCGGCTGTACCTCGTCAACGTCCGGTGAGCGCAGCAGCCTTA
TCGTTTGAGTCGTGTGCTTGTGTATGTGTCGTGTTATTTGTGTTATTCTT
CTTCAGTCCACTACTACATGGTAACAGTTACAACACGTTGGCGTTTAGTG
CAAGAACAGCGTCCAGGCACAGCAGTGCCGCTTGTTTGCTTGTTTGTGTT
GCGCCATCCTTGGTCATAACATGCACGGACTCGGAATACCGGTATTCTGT
GGTGAGGGTATAGATCCCCCGTTTTTCGGCGTTGGTTTATCTGTTGGCCA
AGGTTTATGCGAGAACAGCGAGGGCAGCCATGAGCGGAAGTTAACAAGTG
GATGGGCAAAGGTCGTAGATTTTTGCGTCGAAACATTATTGCATGCGAAT
GGTTCAATCTGCCCCAAATATCAACAAGCTCAAGTGTGTACGCCTAGAAC
CTCACAGGTGGACTCCTAGCTTCCATCACGTACGATATCCACCCAACACG
CTCGAAAGCCCGTTTGATTTGTTCTGCTTTTGTGCACGTTGGTGTTCTCC
ATCACCAAGGGTTGACCGGGGCTCCCTTGATTCCACCAACTGTTTCAAAA
GAGCTTCAGAATCTCGATTGGCCCTTGCCCTTCCTCCTTACAATAGTGAG
CTTTACATTTGAACAACACTGCACGTCGATTCTTCTCTTGGTTTGTCCGC
AGGCTACCGAATGTCGGAACCGATCTCCTCATCACGGTGAACGTTCCTTG
TCCCGACCAAGACACCGCCGTGAGGACGATGGCAGGCGCGGAATGCTTTT
GCTCGGGACCGTCGAGACACACAGCTGGCGCCAACGAGGAGATTTCAACG
GGAGCACCCTTGGTTGACGCGTACAAAACATCAGAAACAGCCTCCGGTGC
ACATGCTGCTGCCGACGGCACAGCGGCGGGGACAGATAAACCGTTCAAGA
GCGCTGCGGATGTCTCCCCGGAGGCAACTGTAGATGGGGTTGGTGGTGTG
GACAAGCCAGAGGATTCCGGAGAGATTGAGGCGGGAGTTGGGGAGGGGAA
GGGGGAGAAACATTCACCTCCTGGAGGAGAGGACGATGTTGACTTGGGTG
TAGCGGCCCTTCGGACCCTCTTGCAGTCTTTTGCCATATTGGATTGGTCG
CTGTTTGGCTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig96:358422..360983-

>mRNA_Ecto-sp6_S_contig96.18637.1 ID=mRNA_Ecto-sp6_S_contig96.18637.1|Name=mRNA_Ecto-sp6_S_contig96.18637.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:358422..360983- (Ectocarpus species6 EcLAC_371)
ATGGCGAGCAGCGCCGGCGATGATGCCACCCTCCGGAAGCTGTTCGGAGG
CGCGATGGAGTGCCTGCTGCCGGCAGCGTACGTGGACGTCAGTGACCTTC
GACAAGTACCCGACCACCAGGAGGTATTTGCCAGCAAGAAGGACGGAATC
AGCATTGTCATTGAAGTTCTATCCTTTGAGGCCGACATCAACATGGACGA
ACAAGCCAGGAAAGACGGTGCAAGTGCGCGACATTTTTTCGACGATCTTG
CGGCGGCTAACGGGGCGACGAGCTCTGCCTGCGATTTTTGCGGCGATCTG
AGCGACAGCATCATGCCGAAGCTCGCATCGTACACCAAGTCAGCCCTGGC
AGGCCGTCAGACGGTAGCGAAGTTTCGTCAAGACGCTCCTCCCGACGCTG
TTCGGCTGTACCTCGTCAACGTCCGGCTACCGAATGTCGGAACCGATCTC
CTCATCACGGTGAACGTTCCTTGTCCCGACCAAGACACCGCCGTGAGGAC
GATGGCAGGCGCGGAATGCTTTTGCTCGGGACCGTCGAGACACACAGCTG
GCGCCAACGAGGAGATTTCAACGGGAGCACCCTTGGTTGACGCGTACAAA
ACATCAGAAACAGCCTCCGGTGCACATGCTGCTGCCGACGGCACAGCGGC
GGGGACAGATAAACCGTTCAAGAGCGCTGCGGATGTCTCCCCGGAGGCAA
CTGTAGATGGGGTTGGTGGTGTGGACAAGCCAGAGGATTCCGGAGAGATT
GAGGCGGGAGTTGGGGAGGGGAAGGGGGAGAAACATTCACCTCCTGGAGG
AGAGGACGATGTTGACTTGGGTGTAGCGGCCCTTCGGACCCTCTTGCAGT
CTTTTGCCATATTGGATTGGTCGCTGTTTGGCTAG
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