mRNA_Ecto-sp6_S_contig94.18521.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: D7G2V4_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V4_ECTSI) HSP 1 Score: 850 bits (2196), Expect = 2.980e-300 Identity = 484/522 (92.72%), Postives = 487/522 (93.30%), Query Frame = 1
Query: 382 MDSLKRVWSDVTSGLLSRREERSPERSDELLPSAESALRLARTARGGSGXXXXRGWWFPGQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPNGLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGDGETVSALGTVFRQLEQGGSRPASTLPVTRAMGVDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGLSAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGGGGGVYRGPGAELQGFFGQVAGSGGGGTASAYMLQYVREERVGREANDMASALEGRIHEDQAS 1947
MDSLKRVWSDVTSGLLSRREERSPERSDELLPSAESALRLARTARGGSGXXXXRGWWFPGQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPNGLANQGNTCYLNSLLQ LYHAPGLREAVFEAL+GGGD ETV ALGTVFRQLEQGG RPASTLPVTRAMGVDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGLSAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVT PPLSPKDGS+SH EDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPS SGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKV E EVLRDA GGGGGVYRGPGAELQGFFGQVAGSGGGGTASAYMLQYVREERVGREA +MASALEGRIHEDQAS
Sbjct: 1 MDSLKRVWSDVTSGLLSRREERSPERSDELLPSAESALRLARTARGGSGXXXXRGWWFPGQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPNGLANQGNTCYLNSLLQALYHAPGLREAVFEALTGGGDSETVLALGTVFRQLEQGG-RPASTLPVTRAMGVDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGLSAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTPPPLSPKDGSNSHSDSHTDA--------EDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSPHQPSEDNAGGSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVFEGEVLRDALGGGGGVYRGPGAELQGFFGQVAGSGGGGTASAYMLQYVREERVGREATEMASALEGRIHEDQAS 513
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: A0A835YMK6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK6_9STRA) HSP 1 Score: 276 bits (706), Expect = 3.870e-78 Identity = 172/405 (42.47%), Postives = 224/405 (55.31%), Query Frame = 1
Query: 670 PNGLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGDGETVSALGTVFRQLEQGGSRPASTLPVTRAMGVDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGLSAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGGGGGVYRGPGAELQGFFGQVAGSGGGGTASAYMLQYVREERV 1884
P GL NQGNTCY+NSLLQT ++ P LR AV A GG + L VF L + G ST P+T AMG+DP QQDAQEFGRFLFM+L AG+ EV ++ A++ F+G L +Y++C++V F++ + E FYDL ++++G L++SLD+F E L+GDNR R HGLQDARKG+RF+ PP +QFHLKRF YD GD+ K++ RFEFP LD+SPWV+ P G ++ Y LSAV+MHVGG ++GHYYAY+R P + W +DD RVT V+ VL+DA+GGG RG G L G G+ G G G ASAYMLQYVR++ V
Sbjct: 227 PVGLENQGNTCYMNSLLQTAFNVPRLRGAVLSAPKAGG---ALGGLQRVFEDL-RAGYGAGSTRPLTAAMGIDPRYQQDAQEFGRFLFMSL------------LEAGD-----EV--VTEAVETTFSGYLENYMDCINVPFSRNRPEPFYDLSVEVEGLRNLKESLDQFTTPEELTGDNRWRTEPHGLQDARKGVRFISFPPFIQFHLKRFRYDMNTGDMGKVNSRFEFPETLDVSPWVSEP------GGEACSNPAAAPL------------NYSLSAVLMHVGGVSSGHYYAYIR-------------------------------------PPHKSQWYLVDDDRVTPVTAKAVLQDAYGGG--QRRGVGGLLGGLLGRKRGGQGTG-ASAYMLQYVRDDSV 550
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: A0A446U041_TRITD (USP domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446U041_TRITD) HSP 1 Score: 191 bits (486), Expect = 1.150e-50 Identity = 129/369 (34.96%), Postives = 178/369 (48.24%), Query Frame = 1
Query: 676 GLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGD---GETVSALGTVFRQLEQGGSRPASTLPVTRAMG---VDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGL-SAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGG 1761
GL NQG TCY+NSLLQTLYH P R+AV+ + D G AL ++F +L+ + A T +T++ G D +Q D QE R L LE DK G + I+ LF G ++Y+EC++V + ++E+FYDL +D+KG + S D+++E E L GDN+ +A +HGLQDARKG+ FL PPVLQ LKRFEYD + +VKI+DR+EFP +LD L DG + Y L +V++H GG GHYYA++R P+ S W K DD RVTK + L + +GG
Sbjct: 17 GLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVA-TKELTKSFGWDTYDSFMQHDVQELNRVLCEKLE-------------------DKMKGTVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYQAEQHGLQDARKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLD---------LDKDDGK-----------YLTPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIR----PTL---------------------------------SDQWYKFDDERVTKEDTKKALEEQYGG 308
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: K3WE28_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WE28_GLOUD) HSP 1 Score: 194 bits (493), Expect = 1.490e-50 Identity = 132/380 (34.74%), Postives = 193/380 (50.79%), Query Frame = 1
Query: 676 GLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGD-GETVS-ALGTVFRQLEQGGSRPASTLPVTRAMG---VDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGLSAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGGGG-GVYRGPGAEL 1797
GL NQG TCY+NSLLQTL+H R+ V++ S D ++VS AL VF +L Q S+ ST +TR+ G +D +Q D QE R L LE ++ + D+A IK LF G++ S+V+CV+V F ++E+FYDL +D+KG + +S +++E E+L GDN+ A +G QDA+KGIRFLQ PPVL LKRFEYDP + +VKIHDRFEFP L + +++S + + +S+ + Y L +V++H G GHYY ++R G + + S+ W K DD +++ V E + +G G G+ GP L
Sbjct: 57 GLKNQGATCYMNSLLQTLFHLRAFRQVVYDTPSEKEDTNDSVSLALQRVFYRL-QTQSKAVSTKELTRSFGWSQIDSFMQHDVQELYRILCDRLE--EKMKNTKVDSA----------------IKRLFEGKVRSFVQCVNVEFQSFRDESFYDLQLDVKGCKDIYESFRKYVEIEMLQGDNQYEAEGYGKQDAKKGIRFLQFPPVLNIQLKRFEYDPLRDGMVKIHDRFEFPKTLVLDDFISSSSDAQEKKENSNSEGKKQPSG---------SHVYHLHSVLVHSGDVHGGHYYVFIR-----------------PGKDIAQ----------------SSNWFKFDDDQISCVDEQTAIEGNYGSGSPGIESGPSTPL 375
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: A0A7S2BF77_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BF77_9STRA) HSP 1 Score: 195 bits (496), Expect = 2.480e-50 Identity = 140/374 (37.43%), Postives = 183/374 (48.93%), Query Frame = 1
Query: 670 PNGLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGDGETVSALGTVFRQLEQG-GSRPASTLPVTRAMGVDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGLSAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGS-GTLQKSLDRFIEAELLSGDNRLRAGEH----GLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGGGGGV 1773
PNGL N GNTCY+N+LLQ LYH +REAV +A + G G AL +FR L+ RPA T + RA+GVD QQD+QEF LF L +S GEA + F GRL++ ++C V F K +E F +L +D+ GS G ++ +L RF ELL+GDN+ RA GLQDA K R + P VLQ HLKRF YDP + +VK+ D+ F ELD+ P++ G++ XXXXX E YKL AV++H+G GHYYAYVR + G+P W+ DD V +V +V DAFGG G
Sbjct: 123 PNGLTNHGNTCYMNALLQGLYHVDAVREAVIDAAADSGAGGVPGALAAIFRALKLNENGRPAPTKALCRALGVDVREQQDSQEFRAALFAEL--------TSHPAMPGEA------------LYAPFEGRLLNRIKCTGVDFEKTWKEPFVELALDVAGSRGHVKHALARFTADELLTGDNKYRAKNKETDLGLQDATKSCRIQKAPEVLQLHLKRFAYDPRRDRMVKVADKLSFDEELDLKPYMVD------QGAEGEXXXXX----------EVAESVYKLHAVLIHLGDADHGHYYAYVR---------------------------------PQLGSPGGGPWLCFDDSNVAEVPARQVYADAFGGRAGA 427
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: D8LL31_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL31_ECTSI) HSP 1 Score: 205 bits (522), Expect = 2.550e-50 Identity = 148/435 (34.02%), Postives = 210/435 (48.28%), Query Frame = 1
Query: 676 GLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGDGETVSALGT--VFRQLEQGGSRPASTLPVTRAMG---VDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGLSAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGE-HGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGGGGGVYRGPGAELQGFF--------GQVAGSG---GGGTASAYMLQYVREERVGREANDMASALEGRI 1929
GL NQG TCY+NSLLQTLYH LR AV++ + + T AL VF +L Q S+ T +T++ G D QQD QE R L LE D +P + I+ LF G + SY++CVDV FT + E +YD+ +D+KG + +S +++E E+L GDN+ AGE HG Q A+KG+RFL+ PPVL HLKRFEY+ G +VK++DRF FP E+D+ ++ G ++ + ++Y L +V++H G GHY+AY+R P+ G W K +D VT+V E+E + ++GGG V + FF G V G G GG SAYML YVRE + + D+ S+ + I
Sbjct: 373 GLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEENSVTSMALALQRVFYRL-QTSSKSVGTKELTKSFGWDAYDSFTQQDVQELNRVLCDHLE---DKMKGTP---------------VEGTIQRLFEGTIRSYIQCVDVDFTSARVETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEQHGRQVAKKGVRFLRFPPVLNVHLKRFEYEMTTGTMVKVNDRFSFPREMDIDQYL---------GEEAERDP-------------QRPNRYILHSVLVHSGDVHGGHYFAYIR----------------------PDGRVKGG------------QWCKFNDEVVTQVDESEAIEGSYGGGPDVLEERFRDTHTFFPRDVDSDGGGVVGRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTSSEDNGI 732
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: A0A6H5KU31_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU31_9PHAE) HSP 1 Score: 204 bits (520), Expect = 5.950e-50 Identity = 147/435 (33.79%), Postives = 210/435 (48.28%), Query Frame = 1
Query: 676 GLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGDGETVSALGT--VFRQLEQGGSRPASTLPVTRAMG---VDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGLSAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGE-HGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGGGGGVYRGPGAELQGFF--------GQVAGSG---GGGTASAYMLQYVREERVGREANDMASALEGRI 1929
GL NQG TCY+NSLLQTLYH LR AV++ + + T AL VF +L Q ++ T +T++ G D QQD QE R L LE D +P + I+ LF G + SY++CVDV FT + E +YD+ +D+KG + +S +++E E+L GDN+ AGE HG Q A+KG+RFL+ PPVL HLKRFEYD G +VK++DRF FP E+D+ ++ G ++ + ++Y L +V++H G GHY+AY+R P+ G W K +D VT+V E+E + ++GGG V + FF G V G G GG SAYML YVRE + + D+ ++ + I
Sbjct: 417 GLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEENSVTSMALALQRVFYRL-QTSNKSVGTKELTKSFGWDAYDSFTQQDVQELNRVLCDHLE---DKMKGTP---------------VEGTIQRLFEGTIRSYIQCVDVDFTSARVETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEQHGRQVAKKGVRFLRFPPVLNVHLKRFEYDMTTGTMVKVNDRFSFPREMDIDQYL---------GEEAERDP-------------QRPNRYILHSVLVHSGDVHGGHYFAYIR----------------------PDGRVKGG------------QWCKFNDEVVTQVDESEAIEGSYGGGPDVLEERFRDTHTFFPRDVESDGGGVVGRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNSEDNGI 776
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: A0A453BLL9_AEGTS (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Poaceae TaxID=4479 RepID=A0A453BLL9_AEGTS) HSP 1 Score: 194 bits (492), Expect = 2.910e-49 Identity = 146/436 (33.49%), Postives = 205/436 (47.02%), Query Frame = 1
Query: 676 GLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGD---GETVSALGTVFRQLEQGGSRPASTLPVTRAMGVD---PTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGL-SAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGGGGGVYR-GPGAELQGF-FGQVAGSGGGGTASAYMLQYVREERVGR-----EANDMASALEGRIHEDQ 1941
GL NQG TCY+NSLLQTLYH P R+AV+ + D G AL ++F +L+ S ST +T++ G D +Q D QE R L LE DK G + I+ LF G M+Y+EC++V F ++E+FYDL +D+KG + S D+++E E L GDN+ A +HGLQDA+KG+ F+ PPVLQ LKRFEYD + +VKI+DR+EFP +LD L DG + + Y L +V++H GG GHYYA++R P+ S W K DD RVTK L + +GG + + PG F F + + +AYML Y+RE + + D+A L R+ +D+
Sbjct: 76 GLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYNDSS-VSTKELTKSFGWDMHDSFMQHDVQELNRVLSEKLE-------------------DKMKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCQDVYASFDKYVEVERLEGDNKYHAEQHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLD---------LDRDDGK-----------YLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIR----PTL---------------------------------SDQWFKFDDERVTKEDAKRALEEQYGGEEELPQTNPGLNNTPFKFTKYS--------NAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLEKDR 426
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: A0A6A3B717_HIBSY (Ubiquitinyl hydrolase 1 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B717_HIBSY) HSP 1 Score: 201 bits (510), Expect = 4.330e-49 Identity = 147/433 (33.95%), Postives = 209/433 (48.27%), Query Frame = 1
Query: 676 GLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGD---GETVSALGTVFRQLEQGGSRPASTLPVTRAMG---VDPTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGL-SAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGGGGGVYRGPGAE-LQGFFGQVAGSGGGGTASAYMLQYVREERVGR-----EANDMASALEGRIHE 1935
GL NQG TCY+NSLLQTLYH P R+AV+ + D G AL ++F +L+ S A+T +T++ G D +Q D QEF R L LE DK G + I+ LFAG ++S++EC++V +T ++E+FYDL +D+KG + S D+++E E L GDN+ RA ++GLQDA+KG+ F+ PPVLQ LKRFEYD + LVKI+DR+EFP +LD+ LSP+ + Y L +V++H GG GHYYAY+R P+ S W K +D +VTK + L + +GG PG F + + +AYML Y+RE + E ND+A L R+ +
Sbjct: 179 GLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDTPSGSIPLALQSLFYKLQYRDSS-ATTKKLTKSFGWDAFDSFMQHDVQEFNRILCEKLE-------------------DKMKGTVVEGTIQKLFAGNIVSFIECINVDYTSARKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYRAEQYGLQDAKKGLLFIDFPPVLQLQLKRFEYDFLRNTLVKINDRYEFPLQLDLDR-DDGKYLSPE-------------------ANRGVRNLYTLHSVLVHSGGEQGGHYYAYIR----PTL---------------------------------SDQWYKFNDEKVTKEDTEKALEEQYGGEEFPETNPGFNNTPPRFNKYS--------NAYMLVYIRESDKDKIICNVEENDIAEHLRERLEK 526
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Match: A0A1D6HSU3_MAIZE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6HSU3_MAIZE) HSP 1 Score: 194 bits (492), Expect = 8.230e-49 Identity = 146/436 (33.49%), Postives = 205/436 (47.02%), Query Frame = 1
Query: 676 GLANQGNTCYLNSLLQTLYHAPGLREAVFEALSGGGD---GETVSALGTVFRQLEQGGSRPASTLPVTRAMGVD---PTVQQDAQEFGRFLFMALEGESDIQGSSPDTAAGEAGGDKEVGGL-SAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWVTSPPLSPKDGSDSHXXXXXXXXXXXXXXXEDKADKYKLSAVVMHVGGPAAGHYYAYVRYREPPSXXXXXXXXXXXSGSGVPEAAATAGVVADKRGAPPSTTWVKLDDHRVTKVSEAEVLRDAFGGGGGVYR-GPGAELQGF-FGQVAGSGGGGTASAYMLQYVREERVGR-----EANDMASALEGRIHEDQ 1941
GL NQG TCY+NSLLQTLYH P R+AV+ + D G AL ++F +L+ S ST +T++ G D +Q D QE R L LE DK G + I+ LF G M+Y+EC++V F ++E+FYDL +D+KG + S D+++E E L GDN+ A +HGLQDA+KG+ F+ PPVLQ LKRFEYD + +VKI+DR+EFP +LD L DG + + Y L +V++H GG GHYYA++R P+ S W K DD RVTK L + +GG + + PG F F + + +AYML Y+RE + + D+A L R+ +D+
Sbjct: 101 GLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYNDSS-VSTKELTKSFGWDMHDSFMQHDVQELNRVLSEKLE-------------------DKMKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCQDVYASFDKYVEVEQLEGDNKYHADKHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLD---------LDRDDGK-----------YLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIR----PTL---------------------------------SDQWFKFDDERVTKEDAKRALEEQYGGEEELPQTNPGLNNTPFKFTKYS--------NAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLEKDR 451 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig94.18521.1 >prot_Ecto-sp6_S_contig94.18521.1 ID=prot_Ecto-sp6_S_contig94.18521.1|Name=mRNA_Ecto-sp6_S_contig94.18521.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=660bp MAASKSKSPSPGSRCRRQCCQTWLAATAAVGMLVLLLVPVAWVGAFVKHPback to top mRNA from alignment at Ecto-sp6_S_contig94:307900..314955+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig94.18521.1 ID=mRNA_Ecto-sp6_S_contig94.18521.1|Name=mRNA_Ecto-sp6_S_contig94.18521.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7056bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:307900..314955+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig94:307900..314955+ >mRNA_Ecto-sp6_S_contig94.18521.1 ID=mRNA_Ecto-sp6_S_contig94.18521.1|Name=mRNA_Ecto-sp6_S_contig94.18521.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1980bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:307900..314955+ (Ectocarpus species6 EcLAC_371)back to top |