mRNA_Ecto-sp6_S_contig94.18518.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: D7FWX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX5_ECTSI) HSP 1 Score: 535 bits (1377), Expect = 1.920e-184 Identity = 285/293 (97.27%), Postives = 285/293 (97.27%), Query Frame = 2
Query: 92 MKATCLMFLGLAGRAAGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRVDSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
MKATCLMFLGLAGRAAGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRVDSGEAC ALGEKADSICNQALEQFSTDAADTENDP KESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQA MVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI
Sbjct: 1 MKATCLMFLGLAGRAAGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRVDSGEACPALGEKADSICNQALEQFSTDAADTENDPTKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQA------MVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 287
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: A0A835YIM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM6_9STRA) HSP 1 Score: 339 bits (870), Expect = 3.920e-108 Identity = 183/289 (63.32%), Postives = 222/289 (76.82%), Query Frame = 2
Query: 116 LGLAGRA----AGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRVDSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
LGLA A A AAS + Y ++CH V+ K+ AM DI L+++V+ GE C LG KAD+ICNQALEQFS++A D END A ESIFDEKVEELE +LD+PLQ+VY++QL L+REKALQRYK AKGSETSDYQA M+AADQ++ KEAE+STR GS W+++ R+SLQ+ MNE+AQR KKA DAA++AAQQ STAMQ+ QLYGG SPWNFG AYRIPD++INLSG YQQG+AN+QM+CVPDEY+ +LGA GFTHGVGPGNLGLSVNL+I
Sbjct: 8 LGLAAAALAGTAAAASANPDMYSLTCHKVFCKVTASAMKDIDALKSKVEGGELCPGLGAKADAICNQALEQFSSEAPDAENDDALESIFDEKVEELEKTLDMPLQMVYLRQLALIREKALQRYKAAAKGSETSDYQA------MIAADQFYAKEAESSTRQGSGWDYARERSSLQSTMNELAQRSKKAADAAIKAAQQQSTAMQFXXXXXXXXXXXXQQLYGGS-SPWNFGVAYRIPDTHINLSGNYQQGRANVQMSCVPDEYAPLLGASGFTHGVGPGNLGLSVNLNI 289
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: A0A6V2EIW0_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EIW0_9STRA) HSP 1 Score: 263 bits (671), Expect = 1.780e-78 Identity = 142/278 (51.08%), Postives = 193/278 (69.42%), Query Frame = 2
Query: 140 GAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRV-DSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
G A+D Y C V +I +A I++++ + D G+ G KAD+ICNQALE+F+ +A D +D + +D K+EELE +LD PLQ++Y++QL ++REKALQ Y+ ++ SE+SDY+A M+ AD F +EAE +TR GS W+++ R+ LQ+ MN+MAQ KK D +++A Q STAMQYLQ QQQ + LQ QLYG Q SPWN G AYRIPD+N NL G+YQQG+ N Q++CVPDEY+ +LG GFT+GVGPGNLGLS+NLSI
Sbjct: 37 GGATD----YASLCESVKCQIVEKASQSIEDMRRMIMDEGQTAPEFGAKADAICNQALEEFAQNAPDAGDDALAAATYDRKLEELEAALDAPLQVLYLRQLAIVREKALQSYRASSRSSESSDYEA------MLQADSMFQREAEEATREGSDWDYATERSYLQSVMNDMAQTSKKLIDVQMKSANQQSTAMQYLQQQQQMIQQLQMQLYG-QSSPWNVGLAYRIPDTNFNLQGSYQQGRGNFQLSCVPDEYAPLLGPNGFTNGVGPGNLGLSLNLSI 303
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: B7G8P6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8P6_PHATC) HSP 1 Score: 259 bits (662), Expect = 4.340e-77 Identity = 140/275 (50.91%), Postives = 190/275 (69.09%), Query Frame = 2
Query: 149 SDSVSAYHMSCHGVYNKIARQAMGDIKELQTR-VDSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
+D++ AY + V K+ + A I++L++ VD G+ A G ++ICNQALE F++ A + +D K + FD K++ELE +LD PLQ++Y+KQL LRE ALQRY+ K S SDY+A M+ AD FV+EA+ S R GS W+++A R LQ+ MN +A+ +KA D + +AQQ TAMQ+LQ QQQ + LQ QLYG Q SPWN G AYRIPD+N NL G+YQQG+AN+Q++CVPDEY+ LG GFT+GVGPGNLGLS+NLS+
Sbjct: 41 NDTIEAYEQALESVKAKVLQTAASSIEDLRSEIVDGGKVVEAFGTATETICNQALEGFASAAPEAGDDANKAATFDRKLQELEAALDAPLQVLYLKQLGFLREAALQRYRAATKTSGASDYEA------MLQADSQFVREADGSIREGSDWDYTAERAFLQSVMNNIAESSRKAMDVQMNSAQQQQTAMQFLQSQQQMIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCVPDEYAPFLGPNGFTNGVGPGNLGLSLNLSV 308
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: B8CCD1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCD1_THAPS) HSP 1 Score: 255 bits (651), Expect = 4.320e-76 Identity = 146/276 (52.90%), Postives = 193/276 (69.93%), Query Frame = 2
Query: 146 ASDSVSAYHMSCHGVYNKIARQAMGDIKELQTR-VDSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
AS SVS H+ I+ A I+E + + VD G A G KAD IC+QA+E+F+ A +D S + K+EELE+SLD PLQ++Y++QL+LLRE+AL Y++ +K S+ SDY+A M+AAD F++ AE+STR S+W + A R+ LQT M+E AQ KK T+ V+++QQ STAMQ+LQ QQQ + LQ QLYG Q SPWN G AYRIPD+N NL G+YQQG+AN+Q++CVPDEY+ MLG GFT+GVGPGNLGLS+NLSI
Sbjct: 4 ASLSVSIIHL--------ISYAAHVQIEEARRKIVDEGTAIPDFGAKADEICSQAIEEFARSAPSPSDDNTASSAYARKLEELESSLDAPLQVLYLRQLSLLREQALSSYRSASKASDASDYEA------MLAADAQFLRAAESSTRKASTWTYDAERSHLQTVMSEFAQTTKKLTETQVKSSQQQSTAMQFLQHQQQMIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCVPDEYAPMLGPNGFTNGVGPGNLGLSLNLSI 264
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: W7TWU4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWU4_9STRA) HSP 1 Score: 253 bits (647), Expect = 3.060e-74 Identity = 142/293 (48.46%), Postives = 189/293 (64.51%), Query Frame = 2
Query: 92 MKATCLMFLGLAGRAAGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRVDSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
M+ TCL+ + + DS Y + C + K + A +I+ L+ V G+ + G +AD ICN AL F+ +A D + DP K I D++VEELE SLD PL +++++QL LR+KALQRYKT AKG+ETSDY+A M AAD +F EAEA RAGS W+++A R SLQ MN +AQ+ KK D +AAQ M LQ Q Q+ LQN L GG SP NFG +YRIPD+NIN+ T+QQGK N+Q TC+PD+ + LG QGFTHG+GPGNLG++VNL++
Sbjct: 73 MRGTCLVVMVVVMGMTVVRGDSADLYAVQCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEA------MQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQXQSQMMQLQNALGGG--SPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: A0A7R9WU24_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WU24_9STRA) HSP 1 Score: 250 bits (639), Expect = 9.100e-74 Identity = 137/275 (49.82%), Postives = 187/275 (68.00%), Query Frame = 2
Query: 149 SDSVSAYHMSCHGVYNKIARQAMGDIKELQTR-VDSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
+++ S Y GV ++ A G I+ L+++ V+ G G +AD+ICN+ALE F+ A D +DP + +D+K+E+LE +LD PLQ++Y++QL LLRE ALQRY+ +K S S+Y+A M+ AD F ++AE STR GS W+F+A R+ LQ MN +A+ GKKA D V++AQQ T M +L + LQ QLYG Q SPWN G AYRIPD+N NL G+YQQG+AN+Q++CVPDEY+ LG GFT+GVGPGNLGLSVNLS+
Sbjct: 38 ANAASGYATELEGVKLQVLDAATGSIESLRSKIVNEGTIIDGFGGQADTICNKALEDFAKSAPDAGDDPTAAAEYDKKLEQLEAALDAPLQVLYLRQLALLRENALQRYRAASKTSGASEYEA------MLQADGLFTRQAEDSTREGSDWDFTAERSYLQAVMNNIAESGKKAVDVQVKSAQQQQTTMAFLXXXXXTIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCVPDEYAPFLGPNGFTNGVGPGNLGLSVNLSV 305
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: A0A7S4J3B5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3B5_9STRA) HSP 1 Score: 249 bits (636), Expect = 2.200e-73 Identity = 138/272 (50.74%), Postives = 184/272 (67.65%), Query Frame = 2
Query: 158 VSAYHMSCHGVYNKIARQAMGDIKELQTRV-DSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
+S Y C V + + +A I L+ V D G + GEKAD ICN+ALE+F+ A D + D + S ++ K+EELE LD LQ++Y++QL LLREKALQ Y+ + +E SDY+A M+ AD FV+ AE STR GS W+FS+ R+ LQ+ MN++AQ KK D ++A ++ + MQ LQ QQQ + LQ QLYG Q SPWN G AYRIPD+N N+ G+YQQG+ NLQ++CVPDEY+ MLG GFT+GVGPGNLGLS+NLS+
Sbjct: 37 ISEYSNLCDTVKSSVVEKASQSIDGLRRSVVDEGAIVSEYGEKADEICNKALEEFAKSALDAQGDSSAASTYERKLEELEAVLDASLQVIYLRQLALLREKALQTYRANTRVTEASDYEA------MLQADSQFVRGAEESTRKGSDWDFSSERSYLQSVMNDVAQTRKKLIDVQMKATEKQNVIMQVLQQQQQIIQQLQMQLYG-QTSPWNVGMAYRIPDTNFNVQGSYQQGRTNLQLSCVPDEYAPMLGPNGFTNGVGPGNLGLSLNLSV 301
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: A0A7S2XTT6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTT6_9STRA) HSP 1 Score: 246 bits (628), Expect = 3.440e-72 Identity = 140/278 (50.36%), Postives = 186/278 (66.91%), Query Frame = 2
Query: 140 GAASDSVSAYHMSCHGVYNKIARQAMGDIKELQ-TRVDSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
GAAS+ Y + C V ++I +A I EL+ T VD A A G KADSICNQALE+F+ +A D +D + +D K+EELE +LD PLQ+++++QL L+R+KALQ Y+ A+ +ETSDY+A M+ AD F +EAE + R+ ++W+FS+ R LQ M E AQ KK D ++++QQ STAMQY LQ QLYG Q SPWN G AYRIPD+N NL G YQQG+ + ++CVPDEY+ MLG GFT+GVGPGNLGLS+NLS+
Sbjct: 37 GAASE----YGLQCEAVKSRIIEKANEAIDELRRTIVDQSTAAAEFGAKADSICNQALEEFALNAPDAGDDALAAAEYDRKLEELEAALDSPLQILFLRQLALIRDKALQNYRAAARTTETSDYEA------MLQADTLFTREAEEAVRSEAAWDFSSERAHLQAVMFENAQTSKKLIDVQMKSSQQQSTAMQYXXXXXXXXXXLQQQLYG-QTSPWNVGLAYRIPDTNFNLQGNYQQGRGTVSLSCVPDEYAPMLGPNGFTNGVGPGNLGLSLNLSV 303
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Match: A0A7R9W768_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W768_9STRA) HSP 1 Score: 241 bits (615), Expect = 2.100e-70 Identity = 138/280 (49.29%), Postives = 187/280 (66.79%), Query Frame = 2
Query: 131 RAAGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRVDSGEACAALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQASENIHAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 970
R ASD S + V K A Q++ D + ++ VD G ++ GEK+D IC +ALE+F+ +A D +D S +D K+EELE LD LQ++Y++QL LLRE+ALQ Y+ + +E SDY+A M+ AD FV+ AE +TR GS W+FS+ R+ LQ+ MN++AQ KK D ++A ++ + +Q LQ QQQ + LQ QLYG Q SPWN G AYRIPD+N NL G YQQG+ NLQ++CVPDEY+ MLG GFT+GVGPGNLGLS+NLS+
Sbjct: 26 RGGSVASDYASLCEATKSSVIEK-ASQSIDDFR--RSVVDEGTILSSFGEKSDDICQKALEEFAKNAPDAGDDSLAASTYDRKLEELEAVLDASLQVIYLRQLALLREEALQTYRANTRVTEASDYEA------MLQADSQFVRGAEEATRKGSDWDFSSERSYLQSVMNDVAQTRKKLIDVQMKATEKQNVILQVLQQQQQIIQQLQMQLYG-QTSPWNVGMAYRIPDTNFNLQGQYQQGRTNLQLSCVPDEYAPMLGPNGFTNGVGPGNLGLSLNLSL 295 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig94.18518.1 >prot_Ecto-sp6_S_contig94.18518.1 ID=prot_Ecto-sp6_S_contig94.18518.1|Name=mRNA_Ecto-sp6_S_contig94.18518.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=294bp MKATCLMFLGLAGRAAGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTback to top mRNA from alignment at Ecto-sp6_S_contig94:262122..270427- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig94.18518.1 ID=mRNA_Ecto-sp6_S_contig94.18518.1|Name=mRNA_Ecto-sp6_S_contig94.18518.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8306bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:262122..270427- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig94:262122..270427- >mRNA_Ecto-sp6_S_contig94.18518.1 ID=mRNA_Ecto-sp6_S_contig94.18518.1|Name=mRNA_Ecto-sp6_S_contig94.18518.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=882bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:262122..270427- (Ectocarpus species6 EcLAC_371)back to top |