mRNA_Ecto-sp6_S_contig93.18475.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: D7G9I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I2_ECTSI) HSP 1 Score: 1293 bits (3346), Expect = 0.000e+0 Identity = 728/781 (93.21%), Postives = 735/781 (94.11%), Query Frame = 1
Query: 1 QATTTADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQFREEAVSESSSTAASGGAWGGEGHPARASASGGSSRKXXXXXXXXXXSRKPGGDVDLAAEREAERFVRRCRPELEDFPHLVTALGAHVAPALREAREEVVRRANQRSSADSFHERADTFETAFETSYFDFQLRCRGVQALRNSLRQQXXXXXXXXRSVPRHPDGGDGPPVSGKDGCGSEGLAEEYLLRTLGAQLAELVTARECEKLGIPFASQDGGACRRPEERMPFISKAASSALAEVLSGDVARSLVRLWQAATAGRQLSDFCETLEEQVFPVCNLVGRRLDKRQERLMVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPTPGPXXXXXXXXXXXXXXXXXXXQPWAGVLLDAVRGHVSSEAEECLSGLQREIQASEAVASSADAGESGRGAEEDSSVGNNDGVVRVKAGKAGGKDAAAVVRLMESV 2343
QATTTADGGEIVTT RLRADIVSAINTAGGRASS ELEVATGVCQTTIGAAVREFWTEQLHGRW QCEEG QVFTSAYLSSLALEAGTA AERGRVSLKELAPILKLPVEFTGTLVSEWM+DPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSIC AATEPRSVEELMEDCDLLH EEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGV GVSATFVQGIIAQFREEA SESSSTA SGG+WGGEGHPARASASGGSSRKXXXXXXXXXXSRKPGGDVDLAAEREAERFVRRCRPELEDF LVTALGAHVAPALREAREEVVRRANQRSSADSFHERAD FETAFETSYFDFQLRCRGVQALRNSLRQQ XXX RSVPRHPDGGDGPPVSGKDGC SEGLAEEYLLRTLGAQLAELVTARECEKLGIPFASQDGGACRRPEERMPFISKAA SALAEVLSGDVA SLVRLWQAATAG QLSDFCETLE+QVFPVCNLVGRRLDKRQERLMVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPTPG XXXXXXQPWAGVLLDAVRGHVSSE EECLSGLQRE+QASEAVA+ ADAGESGRGA EDSSVGNNDGVVRVKA KA KDA A + L+ SV
Sbjct: 6 QATTTADGGEIVTTGRLRADIVSAINTAGGRASSHELEVATGVCQTTIGAAVREFWTEQLHGRWFQCEEGLQVFTSAYLSSLALEAGTAAAERGRVSLKELAPILKLPVEFTGTLVSEWMHDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICGAATEPRSVEELMEDCDLLHPEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVYGVSATFVQGIIAQFREEAASESSSTAPSGGSWGGEGHPARASASGGSSRKXXXXXXXXXXSRKPGGDVDLAAEREAERFVRRCRPELEDFARLVTALGAHVAPALREAREEVVRRANQRSSADSFHERADAFETAFETSYFDFQLRCRGVQALRNSLRQQQXXXQ---RSVPRHPDGGDGPPVSGKDGCESEGLAEEYLLRTLGAQLAELVTARECEKLGIPFASQDGGACRRPEERMPFISKAACSALAEVLSGDVAGSLVRLWQAATAGCQLSDFCETLEDQVFPVCNLVGRRLDKRQERLMVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPTPG-LPQPTQEGGHDSSXXXXXXQPWAGVLLDAVRGHVSSETEECLSGLQRELQASEAVATWADAGESGRGAAEDSSVGNNDGVVRVKAEKARDKDATAGLFLVASV 782
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A6H5JY60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY60_9PHAE) HSP 1 Score: 1155 bits (2987), Expect = 0.000e+0 Identity = 679/796 (85.30%), Postives = 696/796 (87.44%), Query Frame = 1
Query: 1 QATTTADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQFREEAVSESSSTAASGGAWGGEGHPARASASGGSSRKXXXXXXXXXXSRKPGGDV--DLAAEREAERFVRRCRPELEDFPHLVTALGAHVAPALREAREEVVRRANQRSSADSFHERADTFETAFETSYFDFQLRCRGVQALRNSLRQQXXXXXXXX-RSVPRHPDGGDGPPVSGKDGCGSEGLAEEYLLRTLGAQLAELVTARECEKLGIPFASQDGGACRRPEERMPFISKAASSALAEVLSGDVARSLVRLWQAATAGRQLSDFCETLEEQVFPVCNLVGRRLDKRQERLMVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPTPGPXXXXXXXXXXXXXXXXXXXQPWAGVLLDAVRGHVSSEAEECLSGLQREIQASEAVASSADAGESGRGAEEDSSVGNNDGVVRVKAGKAGGKDAAAVVRLMESVEAARVLGMACGD 2379
+ATTTADGGEIVTT RLRADIVS +NTAGGRASS ELE LHGRW QCEEG +VF+SAYLSSLALEAGTAVAERGR+S++ELAPILKLPVEFT TLVSEWM+DPGSHLMTARKLKLVSGALVTEAYE TKRAELCSICCAATEPRSVEELM+DC LLH EEEEMALELLT LT+SG+LEGSLAGGARGAQ YVP SFVAAQHEAAHAFFSAN YLDHATAS LQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGV GVSATFVQGIIAQFREEA EGHPAR XXX SRK GGDV DLAAEREAERFVRRCRPEL+DFPHLV ALGAHVAPALREARE+VVRRANQRSSADSFHERAD FETAFETSYFDFQLRCRGVQALRNSLRQ XXXXXXXX R+VP HP DGPPVSGKDGC S AE+YLLRTLGAQLAELVT RECEKLGIPFASQDGGACRRPEERMPFIS+AASSALAEVLS DVA SLVRLWQAATAG QLSDFCETLEEQVFPVCNLVGRRLDKRQER +VEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLP PGP XXXXXXXXXXXXXXXX PWA VLLDAVRGHVSSEAEECLS LQREIQASEAVA SADAGESGRGAEEDSSVGNNDGVV VKAGKAGGKDAAA VRLMESVEAARVLGMA GD
Sbjct: 24 EATTTADGGEIVTTGRLRADIVSVVNTAGGRASSHELE---------------------LHGRWFQCEEGLEVFSSAYLSSLALEAGTAVAERGRISVQELAPILKLPVEFTRTLVSEWMHDPGSHLMTARKLKLVSGALVTEAYETTKRAELCSICCAATEPRSVEELMQDCALLHPEEEEMALELLTELTKSGQLEGSLAGGARGAQVYVPGSFVAAQHEAAHAFFSANGYLDHATASALQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVYGVSATFVQGIIAQFREEAAXXXXXXXXXXXXXXXEGHPARXXXXXXXXXXXXXKNHKRGASRKAGGDVSVDLAAEREAERFVRRCRPELKDFPHLVAALGAHVAPALREAREDVVRRANQRSSADSFHERADAFETAFETSYFDFQLRCRGVQALRNSLRQXXXXXXXXXKRNVPSHPGDEDGPPVSGKDGCRSGERAEKYLLRTLGAQLAELVTTRECEKLGIPFASQDGGACRRPEERMPFISEAASSALAEVLSRDVAESLVRLWQAATAGCQLSDFCETLEEQVFPVCNLVGRRLDKRQERRLVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPPPGPRXXXXXXXXXXXXXXXX---PWAAVLLDAVRGHVSSEAEECLSDLQREIQASEAVAISADAGESGRGAEEDSSVGNNDGVVCVKAGKAGGKDAAAGVRLMESVEAARVLGMAYGD 795
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A5D6Y6P3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6P3_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.760e-20 Identity = 99/350 (28.29%), Postives = 166/350 (47.43%), Query Frame = 1
Query: 1 QATTTADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHG---RWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQFREEA 1041
Q T G + +T +++ ++ + GGRAS EL+ + + + V + + G + G +V TS YL ++ + T + E G ++ ELA V++ +V + GS L + L T ++ +++A++ + CAAT P V +++ H EE + E L L + L G+L G + YVP FV AQ E+ ++FF N +LDHA A LQV + + F++ R PDAV LE+ VVS A+ ++ + AV +AS + V+P+ L +D A L+ S L++ V VS FV A+ +++A
Sbjct: 42 QVVHTLTGKQFLTPAQIERELRDFVALGGGRASISELQQLLNIDRVYVERHVAQLTRSRRGGGGTSYYVVNSGEEVVTSGYLDAIMEDTNTLLQETGTTTIGELAQQYGFAVDYMKDVV---LARLGSILRAQER----HNVLYTHSFVASQKAQIRGVFCAATRPTFVPDVVR----AHRFEERVVDECLLELLQRRVLMGTLRG-----REYVPYVFVEAQRESMYSFFQQNGFLDHARALQLQVARPYDFLKRRFPDAVPLERCVVSHALRLQVDGAVEAAVNDASCVDVLTVLPSALPTSDVALLLAKSPLVAASAAPALQIRD--VFAVSRAFVDAATARLQQDA 373
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A7J7PHE1_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PHE1_9CHLO) HSP 1 Score: 97.8 bits (242), Expect = 4.590e-17 Identity = 94/337 (27.89%), Postives = 150/337 (44.51%), Query Frame = 1
Query: 13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGV----CQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDL-LHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFV 1008
T +G E +TT RL+ DI +A+ AGGR EL GV C+ V E G V +G ++ T+ Y SLA E + + G +S+ +LA L E + +S M +T KL SG L T AY + +A+L P ++ L +D L M +L+ L G + GS GG ++VP AAQ A F++ N ++ + + A+++ P+ + LE V VS +VV + +A + A+ +W + ++P L+ D A L+G C + + +VL C VSA+ +
Sbjct: 49 TINGKEYITTDRLKVDIQTALQQAGGRLELTELPALVGVDLAHCEKQAALIVSE------SGGKVMEAQG-ELITTRYFDSLAAEINDLLQDSGVLSMADLAVTYSLNTELLRSTISSRMGST----ITG---KLDSGLLYTPAYVRNIKAQLRGALRGTAAPVALTNLAKDLGLDSFGGSNSMVSQLVDELLSEGAVRGSTKGGGG---SWVPSVHTAAQQGAVSGFYTQNGWVGYELVRKAGISNERAYLKQAFPEGLALESVYVSPSVVSQAEAAVEEALRNGAWLDVATMLPPSLAVQDVAQLLGKCGLSQEEEAKRGQVLA-STCVVSASII 367
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A8J4GI72_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GI72_9CHLO) HSP 1 Score: 90.9 bits (224), Expect = 6.890e-15 Identity = 99/380 (26.05%), Postives = 166/380 (43.68%), Query Frame = 1
Query: 13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGV----CQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMAL-------------------ELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVAD-----------GAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQFREEAVSE 1050
T +G E +T LR++I +A+ AGGR S EL GV C+ V E + L E ++ T+ Y ++A E + E G++S+ ELA L E +VS S L +A +L G L T++Y + +A+L AA+ P V L+ D L + + A L+ L + L G+L GG ++ P + Q EA F+S N ++ + T L + A++R PD + LE V+ +++ L+A D G+ A W + ++P++LS+AD A L+G + + P+K ++ V G + ++A +E+A +E
Sbjct: 54 TLNGKEYLTVDCLRSEIQNALRQAGGRLSLVELPTIVGVDLVHCERQAAVIVAESGSTVL-------EIQGELITAQYFDTIAAEINDQLQETGQISIGELAAQYGLATELVLNVVS-------SKLGSAIDGRLEGGLLYTQSYLRAIKAQLRGALRAASSPALVLALLRDAGLGTTGDAPAAAMGGGLAAAXXXXXXXXVIATLIEELVQERALRGALKGGGT---SWAPAVYGEVQQEAVANFYSQNGWVAYDTVRRLGISNERAYLRSTFPDGLPLESAFVAPSLLATLEAAVDEVATAATAAAGGSAAGCGWVDLGPLLPSILSEADVAALLGRVPLLREQERRPIKERKVHVIGGAWVLSGALLAALQEKADAE 416
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: UPI001885CF1A (E3 UFM1-protein ligase 1 n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885CF1A) HSP 1 Score: 81.6 bits (200), Expect = 4.660e-12 Identity = 94/341 (27.57%), Postives = 150/341 (43.99%), Query Frame = 1
Query: 13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLL--EKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQF 1029
T DG E VT +++ +I ++ GGR + EL+ V + + + R VQ G Q+ YL+ +A E + E G + + EL LP +F L E G ++ + G + T AY A++ + A T P V L+ L +E + +L L SG L GS+ GG + Y+P+ + Q+ AF N YL+ + + L + + ++ R D LL VS A+VE+ +A A+ AV A+W + V+P+ LSD DAA + A + +D VL G VS ++ +A F
Sbjct: 50 TIDGKEYVTPAQISREIREELDRHGGRVNILELQQMINVNWVDVESRASDIAKSD---RSVQLVLG-QLVDDTYLNRVAEEVNDRLQEAGLIGISELCKSYDLPGDF---LHDELAKRIGK-VIQGELDQYSRGVIFTPAYVARHTAKIRGLFSAITRPTPVSGLLGAFGL----QEHLLNGVLEELLTSGRLRGSVVGGRQDNAVYIPEIYSKTQNHWVDAFLQQNGYLEFDSLTRLGIPEPVGHIKKRFKDRKLLFLGAACVSQALVEQAEAEAEEAVNSATWSDMRGVLPSCLSDEDAAAAIEQ--AMRNADVQTAAVLLAGTVVVSQKWIGECLALF 376
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: D8U326_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U326_VOLCA) HSP 1 Score: 72.8 bits (177), Expect = 2.510e-9 Identity = 95/373 (25.47%), Postives = 153/373 (41.02%), Query Frame = 1
Query: 13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGV----CQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALE----------------------LLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHAT------------------ASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEAS-----------WFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLK 966
T +G E +T LR++I +A+ AGGR S EL GV C+ V E G V +G ++ T+ Y ++A E + E G++++ ELA L E +VS + +T R L G L T++Y + +A+L AA P V LM D L + + A L+ L + G L G+L GG ++ P + Q +A +F+S N ++ + T A L + +++R PD + LE VS +++ L+A + A AS W + ++P+VLS+AD A L+G + + P K
Sbjct: 54 TLNGKEYLTVECLRSEIQNALRQAGGRLSLVELPTIVGVDYVHCERQASVIVSE------SGGTVMEVQG-ELITTQYFDAIAAEINDQLHEAGQLNIGELAAQYGLATEMVLNMVSMRLGST----ITGR---LEGGLLYTQSYLRAIKAQLRGALRAAASPALVLNLMRDAGLGATGDAASAXXXXXXXXXXXXXXXXXXXXVIATLIEELVQEGALRGALKGGGT---SWAPAVYGEVQQDAVASFYSQNGWVAYDTVRRKFTPILIRDVPEPSYAPSLGISNERSYLRGTFPDGLPLESAFVSPSLLAALEAAVEDVAAAASTGXXXXXXGGGWVDVAPLLPSVLSEADVAALLGRIPLLRDQERRPAK 409
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A1X1BLY8_9APIC (E3 UFM1-protein ligase 1-like protein n=1 Tax=Babesia sp. Xinjiang TaxID=462227 RepID=A0A1X1BLY8_9APIC) HSP 1 Score: 72.4 bits (176), Expect = 2.950e-9 Identity = 74/303 (24.42%), Postives = 138/303 (45.54%), Query Frame = 1
Query: 13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLV 921
T +G E++T +L ++V+AI + GGR + +L + G+ Q + V + E ++ + ++ + T Y L A + E G + + + A +LP + L+S+ SHL+ R + L + YE K + + A T P S L L + + + +T L + G++ G L G Y P F +H + F+SAN Y++ + + + ++ PDA++LE V ++ +E + + + AVA SW + ++P+ L+ AD A L+
Sbjct: 46 TLNGEELLTLKQLELEVVTAIESRGGRVAVSQLSSSLGIQQNYVECTVEKLLKEH-PDQYTRLQD--TLITKGYTVWLMEIASRRLQECGVLDICDFASEFELPFDLLKMLISQ------SHLIDGR---MNGNLLESRGYEACKERCVMAALAATTVPTSTLHLATVTRL----DVNLVKDTITRLVKIGKVSGELKSGV-----YTPKVFADHRHASLTTFYSANGYIEKSKVTDV-LKSAKDLPAKLFPDAIVLETVYLNRKSLEPISVLVNEAVANGSWRDVGIMLPSDLTSADVAALM 326 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18475.1 >prot_Ecto-sp6_S_contig93.18475.1 ID=prot_Ecto-sp6_S_contig93.18475.1|Name=mRNA_Ecto-sp6_S_contig93.18475.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=675bp MNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELback to top mRNA from alignment at Ecto-sp6_S_contig93:328757..338160+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18475.1 ID=mRNA_Ecto-sp6_S_contig93.18475.1|Name=mRNA_Ecto-sp6_S_contig93.18475.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9404bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:328757..338160+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:328757..338160+ >mRNA_Ecto-sp6_S_contig93.18475.1 ID=mRNA_Ecto-sp6_S_contig93.18475.1|Name=mRNA_Ecto-sp6_S_contig93.18475.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2025bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:328757..338160+ (Ectocarpus species6 EcLAC_371)back to top |