mRNA_Ecto-sp6_S_contig93.18475.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig93.18475.1
Unique NamemRNA_Ecto-sp6_S_contig93.18475.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: D7G9I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I2_ECTSI)

HSP 1 Score: 1293 bits (3346), Expect = 0.000e+0
Identity = 728/781 (93.21%), Postives = 735/781 (94.11%), Query Frame = 1
Query:    1 QATTTADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQFREEAVSESSSTAASGGAWGGEGHPARASASGGSSRKXXXXXXXXXXSRKPGGDVDLAAEREAERFVRRCRPELEDFPHLVTALGAHVAPALREAREEVVRRANQRSSADSFHERADTFETAFETSYFDFQLRCRGVQALRNSLRQQXXXXXXXXRSVPRHPDGGDGPPVSGKDGCGSEGLAEEYLLRTLGAQLAELVTARECEKLGIPFASQDGGACRRPEERMPFISKAASSALAEVLSGDVARSLVRLWQAATAGRQLSDFCETLEEQVFPVCNLVGRRLDKRQERLMVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPTPGPXXXXXXXXXXXXXXXXXXXQPWAGVLLDAVRGHVSSEAEECLSGLQREIQASEAVASSADAGESGRGAEEDSSVGNNDGVVRVKAGKAGGKDAAAVVRLMESV 2343
            QATTTADGGEIVTT RLRADIVSAINTAGGRASS ELEVATGVCQTTIGAAVREFWTEQLHGRW QCEEG QVFTSAYLSSLALEAGTA AERGRVSLKELAPILKLPVEFTGTLVSEWM+DPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSIC AATEPRSVEELMEDCDLLH EEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGV GVSATFVQGIIAQFREEA SESSSTA SGG+WGGEGHPARASASGGSSRKXXXXXXXXXXSRKPGGDVDLAAEREAERFVRRCRPELEDF  LVTALGAHVAPALREAREEVVRRANQRSSADSFHERAD FETAFETSYFDFQLRCRGVQALRNSLRQQ XXX    RSVPRHPDGGDGPPVSGKDGC SEGLAEEYLLRTLGAQLAELVTARECEKLGIPFASQDGGACRRPEERMPFISKAA SALAEVLSGDVA SLVRLWQAATAG QLSDFCETLE+QVFPVCNLVGRRLDKRQERLMVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPTPG              XXXXXXQPWAGVLLDAVRGHVSSE EECLSGLQRE+QASEAVA+ ADAGESGRGA EDSSVGNNDGVVRVKA KA  KDA A + L+ SV
Sbjct:    6 QATTTADGGEIVTTGRLRADIVSAINTAGGRASSHELEVATGVCQTTIGAAVREFWTEQLHGRWFQCEEGLQVFTSAYLSSLALEAGTAAAERGRVSLKELAPILKLPVEFTGTLVSEWMHDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICGAATEPRSVEELMEDCDLLHPEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVYGVSATFVQGIIAQFREEAASESSSTAPSGGSWGGEGHPARASASGGSSRKXXXXXXXXXXSRKPGGDVDLAAEREAERFVRRCRPELEDFARLVTALGAHVAPALREAREEVVRRANQRSSADSFHERADAFETAFETSYFDFQLRCRGVQALRNSLRQQQXXXQ---RSVPRHPDGGDGPPVSGKDGCESEGLAEEYLLRTLGAQLAELVTARECEKLGIPFASQDGGACRRPEERMPFISKAACSALAEVLSGDVAGSLVRLWQAATAGCQLSDFCETLEDQVFPVCNLVGRRLDKRQERLMVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPTPG-LPQPTQEGGHDSSXXXXXXQPWAGVLLDAVRGHVSSETEECLSGLQRELQASEAVATWADAGESGRGAAEDSSVGNNDGVVRVKAEKARDKDATAGLFLVASV 782          
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A6H5JY60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY60_9PHAE)

HSP 1 Score: 1155 bits (2987), Expect = 0.000e+0
Identity = 679/796 (85.30%), Postives = 696/796 (87.44%), Query Frame = 1
Query:    1 QATTTADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQFREEAVSESSSTAASGGAWGGEGHPARASASGGSSRKXXXXXXXXXXSRKPGGDV--DLAAEREAERFVRRCRPELEDFPHLVTALGAHVAPALREAREEVVRRANQRSSADSFHERADTFETAFETSYFDFQLRCRGVQALRNSLRQQXXXXXXXX-RSVPRHPDGGDGPPVSGKDGCGSEGLAEEYLLRTLGAQLAELVTARECEKLGIPFASQDGGACRRPEERMPFISKAASSALAEVLSGDVARSLVRLWQAATAGRQLSDFCETLEEQVFPVCNLVGRRLDKRQERLMVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPTPGPXXXXXXXXXXXXXXXXXXXQPWAGVLLDAVRGHVSSEAEECLSGLQREIQASEAVASSADAGESGRGAEEDSSVGNNDGVVRVKAGKAGGKDAAAVVRLMESVEAARVLGMACGD 2379
            +ATTTADGGEIVTT RLRADIVS +NTAGGRASS ELE                     LHGRW QCEEG +VF+SAYLSSLALEAGTAVAERGR+S++ELAPILKLPVEFT TLVSEWM+DPGSHLMTARKLKLVSGALVTEAYE TKRAELCSICCAATEPRSVEELM+DC LLH EEEEMALELLT LT+SG+LEGSLAGGARGAQ YVP SFVAAQHEAAHAFFSAN YLDHATAS LQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGV GVSATFVQGIIAQFREEA                EGHPAR          XXX       SRK GGDV  DLAAEREAERFVRRCRPEL+DFPHLV ALGAHVAPALREARE+VVRRANQRSSADSFHERAD FETAFETSYFDFQLRCRGVQALRNSLRQ XXXXXXXX R+VP HP   DGPPVSGKDGC S   AE+YLLRTLGAQLAELVT RECEKLGIPFASQDGGACRRPEERMPFIS+AASSALAEVLS DVA SLVRLWQAATAG QLSDFCETLEEQVFPVCNLVGRRLDKRQER +VEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLP PGP XXXXXXXXXXXXXXXX   PWA VLLDAVRGHVSSEAEECLS LQREIQASEAVA SADAGESGRGAEEDSSVGNNDGVV VKAGKAGGKDAAA VRLMESVEAARVLGMA GD
Sbjct:   24 EATTTADGGEIVTTGRLRADIVSVVNTAGGRASSHELE---------------------LHGRWFQCEEGLEVFSSAYLSSLALEAGTAVAERGRISVQELAPILKLPVEFTRTLVSEWMHDPGSHLMTARKLKLVSGALVTEAYETTKRAELCSICCAATEPRSVEELMQDCALLHPEEEEMALELLTELTKSGQLEGSLAGGARGAQVYVPGSFVAAQHEAAHAFFSANGYLDHATASALQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVYGVSATFVQGIIAQFREEAAXXXXXXXXXXXXXXXEGHPARXXXXXXXXXXXXXKNHKRGASRKAGGDVSVDLAAEREAERFVRRCRPELKDFPHLVAALGAHVAPALREAREDVVRRANQRSSADSFHERADAFETAFETSYFDFQLRCRGVQALRNSLRQXXXXXXXXXKRNVPSHPGDEDGPPVSGKDGCRSGERAEKYLLRTLGAQLAELVTTRECEKLGIPFASQDGGACRRPEERMPFISEAASSALAEVLSRDVAESLVRLWQAATAGCQLSDFCETLEEQVFPVCNLVGRRLDKRQERRLVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGATPLLPPPGPRXXXXXXXXXXXXXXXX---PWAAVLLDAVRGHVSSEAEECLSDLQREIQASEAVAISADAGESGRGAEEDSSVGNNDGVVCVKAGKAGGKDAAAGVRLMESVEAARVLGMAYGD 795          
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A5D6Y6P3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6P3_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.760e-20
Identity = 99/350 (28.29%), Postives = 166/350 (47.43%), Query Frame = 1
Query:    1 QATTTADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHG---RWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQFREEA 1041
            Q   T  G + +T +++  ++   +   GGRAS  EL+    + +  +   V +    +  G    +     G +V TS YL ++  +  T + E G  ++ ELA      V++   +V   +   GS L    +       L T ++  +++A++  + CAAT P  V +++      H  EE +  E L  L +   L G+L G     + YVP  FV AQ E+ ++FF  N +LDHA A  LQV + + F++ R PDAV LE+ VVS A+  ++    + AV +AS  +   V+P+ L  +D A L+        S    L++    V  VS  FV    A+ +++A
Sbjct:   42 QVVHTLTGKQFLTPAQIERELRDFVALGGGRASISELQQLLNIDRVYVERHVAQLTRSRRGGGGTSYYVVNSGEEVVTSGYLDAIMEDTNTLLQETGTTTIGELAQQYGFAVDYMKDVV---LARLGSILRAQER----HNVLYTHSFVASQKAQIRGVFCAATRPTFVPDVVR----AHRFEERVVDECLLELLQRRVLMGTLRG-----REYVPYVFVEAQRESMYSFFQQNGFLDHARALQLQVARPYDFLKRRFPDAVPLERCVVSHALRLQVDGAVEAAVNDASCVDVLTVLPSALPTSDVALLLAKSPLVAASAAPALQIRD--VFAVSRAFVDAATARLQQDA 373          
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A7J7PHE1_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PHE1_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 4.590e-17
Identity = 94/337 (27.89%), Postives = 150/337 (44.51%), Query Frame = 1
Query:   13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGV----CQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDL-LHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFV 1008
            T +G E +TT RL+ DI +A+  AGGR    EL    GV    C+      V E       G  V   +G ++ T+ Y  SLA E    + + G +S+ +LA    L  E   + +S  M       +T    KL SG L T AY +  +A+L         P ++  L +D  L        M  +L+  L   G + GS  GG     ++VP    AAQ  A   F++ N ++ +       +    A+++   P+ + LE V VS +VV + +A  + A+   +W +   ++P  L+  D A L+G C   +  +    +VL    C VSA+ +
Sbjct:   49 TINGKEYITTDRLKVDIQTALQQAGGRLELTELPALVGVDLAHCEKQAALIVSE------SGGKVMEAQG-ELITTRYFDSLAAEINDLLQDSGVLSMADLAVTYSLNTELLRSTISSRMGST----ITG---KLDSGLLYTPAYVRNIKAQLRGALRGTAAPVALTNLAKDLGLDSFGGSNSMVSQLVDELLSEGAVRGSTKGGGG---SWVPSVHTAAQQGAVSGFYTQNGWVGYELVRKAGISNERAYLKQAFPEGLALESVYVSPSVVSQAEAAVEEALRNGAWLDVATMLPPSLAVQDVAQLLGKCGLSQEEEAKRGQVLA-STCVVSASII 367          
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A8J4GI72_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GI72_9CHLO)

HSP 1 Score: 90.9 bits (224), Expect = 6.890e-15
Identity = 99/380 (26.05%), Postives = 166/380 (43.68%), Query Frame = 1
Query:   13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGV----CQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMAL-------------------ELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVAD-----------GAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQFREEAVSE 1050
            T +G E +T   LR++I +A+  AGGR S  EL    GV    C+      V E  +  L       E   ++ T+ Y  ++A E    + E G++S+ ELA    L  E    +VS       S L +A   +L  G L T++Y +  +A+L     AA+ P  V  L+ D  L  + +   A                     L+  L +   L G+L GG     ++ P  +   Q EA   F+S N ++ + T   L +    A++R   PD + LE   V+ +++  L+A  D           G+ A   W +   ++P++LS+AD A L+G     +  +  P+K  ++ V G +      ++A  +E+A +E
Sbjct:   54 TLNGKEYLTVDCLRSEIQNALRQAGGRLSLVELPTIVGVDLVHCERQAAVIVAESGSTVL-------EIQGELITAQYFDTIAAEINDQLQETGQISIGELAAQYGLATELVLNVVS-------SKLGSAIDGRLEGGLLYTQSYLRAIKAQLRGALRAASSPALVLALLRDAGLGTTGDAPAAAMGGGLAAAXXXXXXXXVIATLIEELVQERALRGALKGGGT---SWAPAVYGEVQQEAVANFYSQNGWVAYDTVRRLGISNERAYLRSTFPDGLPLESAFVAPSLLATLEAAVDEVATAATAAAGGSAAGCGWVDLGPLLPSILSEADVAALLGRVPLLREQERRPIKERKVHVIGGAWVLSGALLAALQEKADAE 416          
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: UPI001885CF1A (E3 UFM1-protein ligase 1 n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885CF1A)

HSP 1 Score: 81.6 bits (200), Expect = 4.660e-12
Identity = 94/341 (27.57%), Postives = 150/341 (43.99%), Query Frame = 1
Query:   13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLL--EKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLKVLQLGVCGVSATFVQGIIAQF 1029
            T DG E VT +++  +I   ++  GGR +  EL+    V    + +   +        R VQ   G Q+    YL+ +A E    + E G + + EL     LP +F   L  E     G  ++     +   G + T AY     A++  +  A T P  V  L+    L    +E +   +L  L  SG L GS+ GG +    Y+P+ +   Q+    AF   N YL+  + + L + +    ++ R  D  LL      VS A+VE+ +A A+ AV  A+W +   V+P+ LSD DAA  +    A + +D     VL  G   VS  ++   +A F
Sbjct:   50 TIDGKEYVTPAQISREIREELDRHGGRVNILELQQMINVNWVDVESRASDIAKSD---RSVQLVLG-QLVDDTYLNRVAEEVNDRLQEAGLIGISELCKSYDLPGDF---LHDELAKRIGK-VIQGELDQYSRGVIFTPAYVARHTAKIRGLFSAITRPTPVSGLLGAFGL----QEHLLNGVLEELLTSGRLRGSVVGGRQDNAVYIPEIYSKTQNHWVDAFLQQNGYLEFDSLTRLGIPEPVGHIKKRFKDRKLLFLGAACVSQALVEQAEAEAEEAVNSATWSDMRGVLPSCLSDEDAAAAIEQ--AMRNADVQTAAVLLAGTVVVSQKWIGECLALF 376          
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: D8U326_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U326_VOLCA)

HSP 1 Score: 72.8 bits (177), Expect = 2.510e-9
Identity = 95/373 (25.47%), Postives = 153/373 (41.02%), Query Frame = 1
Query:   13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGV----CQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALE----------------------LLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHAT------------------ASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEAS-----------WFEAWAVVPTVLSDADAAHLVGMCAACKRSDGDPLK 966
            T +G E +T   LR++I +A+  AGGR S  EL    GV    C+      V E       G  V   +G ++ T+ Y  ++A E    + E G++++ ELA    L  E    +VS  +       +T R   L  G L T++Y +  +A+L     AA  P  V  LM D  L  + +   A                        L+  L + G L G+L GG     ++ P  +   Q +A  +F+S N ++ + T                  A  L +    +++R   PD + LE   VS +++  L+A  +   A AS           W +   ++P+VLS+AD A L+G     +  +  P K
Sbjct:   54 TLNGKEYLTVECLRSEIQNALRQAGGRLSLVELPTIVGVDYVHCERQASVIVSE------SGGTVMEVQG-ELITTQYFDAIAAEINDQLHEAGQLNIGELAAQYGLATEMVLNMVSMRLGST----ITGR---LEGGLLYTQSYLRAIKAQLRGALRAAASPALVLNLMRDAGLGATGDAASAXXXXXXXXXXXXXXXXXXXXVIATLIEELVQEGALRGALKGGGT---SWAPAVYGEVQQDAVASFYSQNGWVAYDTVRRKFTPILIRDVPEPSYAPSLGISNERSYLRGTFPDGLPLESAFVSPSLLAALEAAVEDVAAAASTGXXXXXXGGGWVDVAPLLPSVLSEADVAALLGRIPLLRDQERRPAK 409          
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Match: A0A1X1BLY8_9APIC (E3 UFM1-protein ligase 1-like protein n=1 Tax=Babesia sp. Xinjiang TaxID=462227 RepID=A0A1X1BLY8_9APIC)

HSP 1 Score: 72.4 bits (176), Expect = 2.950e-9
Identity = 74/303 (24.42%), Postives = 138/303 (45.54%), Query Frame = 1
Query:   13 TADGGEIVTTSRLRADIVSAINTAGGRASSDELEVATGVCQTTIGAAVREFWTEQLHGRWVQCEEGTQVFTSAYLSSLALEAGTAVAERGRVSLKELAPILKLPVEFTGTLVSEWMNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEELMEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAAQHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSAVVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLV 921
            T +G E++T  +L  ++V+AI + GGR +  +L  + G+ Q  +   V +   E    ++ + ++   + T  Y   L   A   + E G + + + A   +LP +    L+S+      SHL+  R   +    L +  YE  K   + +   A T P S   L     L    +  +  + +T L + G++ G L  G      Y P  F   +H +   F+SAN Y++ +  + + ++          PDA++LE V ++   +E +  + + AVA  SW +   ++P+ L+ AD A L+
Sbjct:   46 TLNGEELLTLKQLELEVVTAIESRGGRVAVSQLSSSLGIQQNYVECTVEKLLKEH-PDQYTRLQD--TLITKGYTVWLMEIASRRLQECGVLDICDFASEFELPFDLLKMLISQ------SHLIDGR---MNGNLLESRGYEACKERCVMAALAATTVPTSTLHLATVTRL----DVNLVKDTITRLVKIGKVSGELKSGV-----YTPKVFADHRHASLTTFYSANGYIEKSKVTDV-LKSAKDLPAKLFPDAIVLETVYLNRKSLEPISVLVNEAVANGSWRDVGIMLPSDLTSADVAALM 326          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G9I2_ECTSI0.000e+093.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JY60_9PHAE0.000e+085.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5D6Y6P3_9STRA2.760e-2028.29Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7J7PHE1_9CHLO4.590e-1727.89Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A8J4GI72_9CHLO6.890e-1526.05Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
UPI001885CF1A4.660e-1227.57E3 UFM1-protein ligase 1 n=1 Tax=Syngnathus acus T... [more]
D8U326_VOLCA2.510e-925.47Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A1X1BLY8_9APIC2.950e-924.42E3 UFM1-protein ligase 1-like protein n=1 Tax=Babe... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig93contigEcto-sp6_S_contig93:328757..338160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1088.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G9I2
Preferred nameUFL1
Model size2890
KEGG koko:K14772
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006355,GO:0006464,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007584,GO:0008150,GO:0008152,GO:0008284,GO:0009605,GO:0009889,GO:0009892,GO:0009894,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010605,GO:0010646,GO:0010720,GO:0010941,GO:0012505,GO:0014013,GO:0014015,GO:0016020,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022008,GO:0023051,GO:0030154,GO:0030162,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031667,GO:0031984,GO:0032088,GO:0032092,GO:0032268,GO:0032269,GO:0032434,GO:0032446,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0033143,GO:0033146,GO:0033554,GO:0034976,GO:0036211,GO:0042127,GO:0042175,GO:0042176,GO:0042221,GO:0042493,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043393,GO:0043412,GO:0043433,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051094,GO:0051098,GO:0051099,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051716,GO:0051960,GO:0051962,GO:0060251,GO:0060252,GO:0060255,GO:0060284,GO:0060548,GO:0061136,GO:0065007,GO:0065009,GO:0070647,GO:0071568,GO:0071569,GO:0071704,GO:0080090,GO:0097458,GO:0098827,GO:0120025,GO:0140096,GO:1901564,GO:1901698,GO:1901700,GO:1902065,GO:1903050,GO:1903320,GO:1903321,GO:1903362,GO:1903506,GO:1990564,GO:1990592,GO:2000026,GO:2000058,GO:2000112,GO:2001141
Exons15
EggNOG free text desc.UFM1 transferase activity
EggNOG OGsKOG2235@1,KOG2235@2759
Ec32 ortholog descriptionE3 UFM1-protein ligase 1
Ec32 orthologEc-28_001030.2
Cds size2025
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig93.18475.1prot_Ecto-sp6_S_contig93.18475.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig93 330093..337652 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350568.9335752-UTR-Ecto-sp6_S_contig93:328756..3288701682350568.9335752-UTR-Ecto-sp6_S_contig93:328756..328870Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 328757..328870 +
1682350568.9437315-UTR-Ecto-sp6_S_contig93:329556..3297721682350568.9437315-UTR-Ecto-sp6_S_contig93:329556..329772Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 329557..329772 +
1682350568.95181-UTR-Ecto-sp6_S_contig93:330065..3300921682350568.95181-UTR-Ecto-sp6_S_contig93:330065..330092Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 330066..330092 +
1682350569.0674496-UTR-Ecto-sp6_S_contig93:337652..3381601682350569.0674496-UTR-Ecto-sp6_S_contig93:337652..338160Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 337653..338160 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350568.959705-CDS-Ecto-sp6_S_contig93:330092..3301911682350568.959705-CDS-Ecto-sp6_S_contig93:330092..330191Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 330093..330191 +
1682350568.96756-CDS-Ecto-sp6_S_contig93:330678..3308011682350568.96756-CDS-Ecto-sp6_S_contig93:330678..330801Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 330679..330801 +
1682350568.975883-CDS-Ecto-sp6_S_contig93:331448..3315981682350568.975883-CDS-Ecto-sp6_S_contig93:331448..331598Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 331449..331598 +
1682350568.9839523-CDS-Ecto-sp6_S_contig93:332064..3322021682350568.9839523-CDS-Ecto-sp6_S_contig93:332064..332202Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 332065..332202 +
1682350568.9950585-CDS-Ecto-sp6_S_contig93:332806..3329201682350568.9950585-CDS-Ecto-sp6_S_contig93:332806..332920Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 332807..332920 +
1682350569.0036082-CDS-Ecto-sp6_S_contig93:333114..3333211682350569.0036082-CDS-Ecto-sp6_S_contig93:333114..333321Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 333115..333321 +
1682350569.011596-CDS-Ecto-sp6_S_contig93:333642..3337951682350569.011596-CDS-Ecto-sp6_S_contig93:333642..333795Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 333643..333795 +
1682350569.019483-CDS-Ecto-sp6_S_contig93:334287..3345901682350569.019483-CDS-Ecto-sp6_S_contig93:334287..334590Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 334288..334590 +
1682350569.0273151-CDS-Ecto-sp6_S_contig93:334910..3349821682350569.0273151-CDS-Ecto-sp6_S_contig93:334910..334982Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 334911..334982 +
1682350569.0351954-CDS-Ecto-sp6_S_contig93:335337..3354601682350569.0351954-CDS-Ecto-sp6_S_contig93:335337..335460Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 335338..335460 +
1682350569.0433705-CDS-Ecto-sp6_S_contig93:336184..3362961682350569.0433705-CDS-Ecto-sp6_S_contig93:336184..336296Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 336185..336296 +
1682350569.0514312-CDS-Ecto-sp6_S_contig93:336724..3369571682350569.0514312-CDS-Ecto-sp6_S_contig93:336724..336957Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 336725..336957 +
1682350569.0594227-CDS-Ecto-sp6_S_contig93:337454..3376521682350569.0594227-CDS-Ecto-sp6_S_contig93:337454..337652Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 337455..337652 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig93.18475.1

>prot_Ecto-sp6_S_contig93.18475.1 ID=prot_Ecto-sp6_S_contig93.18475.1|Name=mRNA_Ecto-sp6_S_contig93.18475.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=675bp
MNDPGSHLMTARKLKLVSGALVTEAYEKTKRAELCSICCAATEPRSVEEL
MEDCDLLHSEEEEMALELLTGLTESGELEGSLAGGARGAQAYVPDSFVAA
QHEAAHAFFSANDYLDHATASGLQVRKLHAFVRDRHPDAVLLEKVVVSSA
VVERLQAVADGAVAEASWFEAWAVVPTVLSDADAAHLVGMCAACKRSDGD
PLKVLQLGVCGVSATFVQGIIAQFREEAVSESSSTAASGGAWGGEGHPAR
ASASGGSSRKGGGKNRKRGGSRKPGGDVDLAAEREAERFVRRCRPELEDF
PHLVTALGAHVAPALREAREEVVRRANQRSSADSFHERADTFETAFETSY
FDFQLRCRGVQALRNSLRQQQQQQQQQQRSVPRHPDGGDGPPVSGKDGCG
SEGLAEEYLLRTLGAQLAELVTARECEKLGIPFASQDGGACRRPEERMPF
ISKAASSALAEVLSGDVARSLVRLWQAATAGRQLSDFCETLEEQVFPVCN
LVGRRLDKRQERLMVEDRQRETKASLFRSVSERDVFHFAALVVFQSVTGA
TPLLPTPGPPPPAQEDGHDSSKQQQQQQQPWAGVLLDAVRGHVSSEAEEC
LSGLQREIQASEAVASSADAGESGRGAEEDSSVGNNDGVVRVKAGKAGGK
DAAAVVRLMESVEAARVLGMACGD*
back to top

mRNA from alignment at Ecto-sp6_S_contig93:328757..338160+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig93.18475.1 ID=mRNA_Ecto-sp6_S_contig93.18475.1|Name=mRNA_Ecto-sp6_S_contig93.18475.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9404bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:328757..338160+ (Ectocarpus species6 EcLAC_371)
CAGGCTACCACAACAGCAGATGGCGGAGAGATCGTGACTACGAGTCGACT GAGAGCCGACATTGTGAGTGCCATCAACACTGCCGGAGGACGCGCCTCGT CTGATGAGTTAGAGGTGTGTGGTTCAGCTGTCGGATTAGTTGTAACTCGA TCTTCTTGCGTGTGAGCCTTTTCATGTCAGTGTAAATTGTCTCTTTCTTC AGACCACGCATGTAAGCATGTGATATCCTTTCAATGTTCCTGGATCGTAC AATATTTTTTTGAAGCAAATTCTGCTGTGCAATAAAACAAGAAGACCCGT AGGGGCAAAGACTCAAACCCATCAAAATGATTTGTCTTGGTGGCCAATCA CACCTACCTGTCCGTGTCGCGTATGGTGTGGATCGAGCTGGCTCTACTTC ATACCATGTAAGTGGGGCATCTTCCCGCATACATCGCCAAAAAACGAACA GGAAGCCAATTCTCGGACGGGGAGGCACTCGCGTATTGTATACGTGCATG ATTGCTCTGTGTCAGATTGTGAGAAGTCAGACGGGGCCTCGAGAAGAGTG ATGCTTCAGTACGTATTTGCTCACACCATGCTCGGACACTTTCGACAGTG ATATCGTAGCGGAAAGCACCATTCACATCGATATCTTTTCTGCTACGCTA TTAGTTGAGCAACGATTCTAGCGTCGAAGGTGCATTTAGGAACGTGACTC TCGTAACCTACACGCAGCACTATCTATCGTTTGTATTTTAGGAGAAATGC CCTCCCCCTCCCCCATGCCTGTACTCCCTACCGTCAAATGCTTGGTCCAG GTTGCCACCGGCGTTTGTCAAACGACTATTGGAGCAGCCGTCAGGGAGTT TTGGACGGAACAGCTACATGGCCGCTGGGTCCAGTGCGAAGAGGGAACTC AGGTCTTTACCAGCGCATACCTATCCTCTCTGGCTCTCGAGGCAGGTACA GCTGTCGCCGAACGAGGGCGGGTTTCACTGAAAGAATTGGCGCCAATTCT CAAGCTGCCAGTCGAGGTAAGAGTTTCGTGCCGCCTACATATGGTAGCAG AGTGGTTGGTCGGCCGAGCGTCGCGAGCACGGCACCGCAAGCACCATCGG CATTTGCGGTGAAGGTACTCGTCGTCATGATTGTTCCTTTTGCCCTTGGT TGGCAACAAATGAATGTTGGTCTGATCACGTCCAACGCCCTATTGGTTTG GCATGTGCCTCCGCTCAAGTTCCACCTACAACGGCAGAATCCGTTCGATA ACCTCGCTCAGAGCCCCCCCTCCCCCCCCCCGGCCTTTGGACCATGTTGT CGTGAGCAGTTCACAGGGACTCTAGTCTCGGAATGGATGAATGACCCAGG ATCCCACCTCATGACGGCGCGAAAGCTCAAACTAGTGAGCGGGGCCCTAG TGACGGAGGCCTACGAAAAGACGAAACGAGCCGAGGTAAGAATCACTGAT ATTGCAACATTTCACAGCTGTACCCGTCGTCCTTACAGACCAATGCCATT CTGAGGGTGTTGGGAAACTCAGGTCTCTACGTGGCGAGTTACCGTAATGC TCAGTTGTACAAGCCCGTTCATTTTTTCATGTGGGTAGAGGCCATCTCCT TCCTCAACCTTCGGAATAATGGCATAGGACATGATGCTTTTCGTGTGCGG AAAGATTACTTCGCAGCGTTCGAACGGCTCCCGTGGAACAAGCTATTCGT CAATGCGTATGCAGGAATGTTGTCCAATATTTTGAGTAATTCCATGGCTG TGGTGCCGTTTGGTTGCAAGATGTTCGCTTTTCGCTTGCGTGATGCGACT GCTTTGAAAATTAACAATAGCAGTAGCAAACACCATACCCGGTTGCATTA CGTGTGTCTCGAAACCGCTGGCACAACAAGTTCTAGTCGAACACCCCCAT GTGCCGCTAAATACCATTTCAGCTATGCTCGATTTGCTGCGCTGCGACGG AGCCGCGTTCGGTCGAAGAGCTGATGGAAGACTGTGATCTCCTACACTCA GAGGAGGAAGAGATGGCCCTCGAGCTGCTGACCGGGTTAACGGAGGTGAG AAGGCACGTTAAAAGCAACCCCGAGGCCAGCGGGGCATCGTCGCACCCGG ATGTTCTCCCTTGAATTCATATCCCTTAGCTTTGGCTGGATTGGCCAGGA TTGGCGCTTGTCCTTGTGTCAGGTATTTCCTATAGATTGGACTTGTTTTG ACTGTGGCACCGGTTACACCATATGCCCGCCGTAAACGCTTTGCTGCGAA ACCCATGCCCCCTAGAGACTGCTTGCTGCCCGTCGTTTTCGTCATTGGAA AGGGCGTCGTCGGTCTAGAGTGTCGCGCTACGGGCTGTGAAGTACTTTTT CGTCTCTCGAGTGCGCGATGTGACCACTTGAGTCAACCCCTCCTAACCAG CCGGTTTATCGCGTGATATTGTTGTCTTTTTTGTTTTTATTGCAGGGTAA AGCTAGTCACTACTGTTTTCGCTACTGCGGTGTAGTGTTTATCGCAATGT GTACCTGGCACGCGGTAGCAGATTGCTTTTCGTGCTCCTGGCGACGGGAC ACCAGTCTCGCACGCACGCGTCCCGCGGTTCTGTCAACTTGAACCCTACT TCTCCGTCTCGTGGTGGTGCCTACGCTTCTACACTGTTCCCTAATCTCTC GCTGGCCGTACCCATGCCACACGGTGGACGCCACGGTGCCAGTCGGGCGA GCTCGAGGGGTCGCTCGCTGGCGGTGCGCGTGGTGCCCAAGCTTACGTTC CGGACTCCTTTGTGGCGGCCCAGCACGAAGCCGCGCACGCCTTCTTCTCT GCCAACGACTACCTGGACCACGCCACCGCATCAGGCCTGCAGGTTCAGAC GAAAAATACGGACGGTGCCAGGATATCCTACACCTTGCGGCGTGCACATG GAATGGAATCCATACCGAATTTTTGGGTGTTGACCCTCCCCCCCCCTCCC CCCCCGCTGCGCTATTTTCGATCACCCTCTGTTATCGTTGTCGGAGGCCA TTTATCGTGTGCTGTTTGCGTTTTTTTTTCTGTCCTCCACCGCAGCGCCA CGAAGCTATAGCTTGTTTGTGAGGGCTGAGAGTTCCGGCTACCAGAGCGG ACAAGTAAATAGCGGTATACTCCGAGTGTTTAGAGGACTGACGGCATTTG CGAGGTCGTGATATTGTTGTGAGGGATATGCAAGTTGGCTGCGGTGCAGG TGGATAGACAGATGACGTCGTCCTCAGCAATGCAGCTCTTGATCATTGCC CCTGTGCGCAACTTTCTGTCGTGCTCGCGCCCCATCGTAACGCCGTGGTC GGCGTAAGGTGCGCAAGCTTCACGCGTTTGTCAGGGACAGACACCCCGAT GCCGTGCTCCTAGAGAAGGTGGTCGTGAGCAGTGCGGTGGTCGAGCGGCT CCAGGCGGTGGCAGACGGGGCCGTTGCCGAAGCGTCGTGGTTTGAGGTGA AGGCGGGGGTTAACAGGGGTGCGAGCCGACTCCTACTCAGACGTCAAAGT GTTTCGGATTTGTATCCGCATATATATCTACGATATACGGGAGTTTGATT GGTGACGCTTCGCTGCATTTTTACAAGCACAATGACTTGGAAGTTGTGTC TATCGGCTTCAAGCGGTAAATCTTGTTGCTGAAATCAGTGGTCTAGAAGG AGAGGGACTTTTTTTCCTTTCATACTCTTCTTGGTGGTTGGCTTTCTGAC CAATCCAAGAAGGTTCCACGAAGTTTCGGCAACTAGTGCAGGAGAGTGGC AGACGCCACACGTCGCCAGCCAGAGCTTCTAGTCTGTACTCTTTTAGTAC CTAGGTGCATGTGTTCGAGAGGTGGTTTCATTCTGCTGTCGTACACTGGG AGCTCACAGAGCGCTATTGCGGTGTCGCCCTTTCATGAAATTCACACTTC GGCATCCCCCCACAATGGGTCATCCGCGGCTTCAAGTATTCTTCCGCTTT ATAGAGCAAACGTTTTTCTTTGCGGAGAGACTGTTGAAGGGACAAACGTC CATCTGCCCCCCTGCCTGACTTTGATGCTGCTCTTTTCGTTTGGGTTCAG GCGTGGGCGGTAGTTCCAACCGTCCTGTCGGATGCCGATGCGGCCCATCT GGTGGGAATGTGCGCCGCGTGTAAGCGTTCGGACGGGGACCCCCTGAAGG TCCTGCAGCTCGGGGTGAGTGTCTCGAAAGCGCCTACGTTTTTGGGTGTT GTGTGGCGCATGTACAAGACTCTCGCTCGCGCTGGAACGAAGGTTGCGCT GTACGAGGTTGCCTCTTCCTGTTGCCAAGAGTAAGGTTGTTGGGTTACTT GTAGCTAGACAACGCCGCTACAACGTGGCCCTTCTGCCCCCCCAACACTG GAAAAAAGGTGTGTGGCGTAAGCGCAACGTTTGTGCAAGGCATCATCGCC CAGTTTCGGGAGGAAGCCGTATCGGAGTCGAGTTCCACCGCTGCTTCTGG CGGTGCATGGGGGGGCGAGGGGCACCCGGCTCGCGCCAGCGCTAGCGGCG GCTCTTCCCGCAAGGGCGGCGGCAAGAATCGCAAGAGAGGTGGTTCGAGG AAGCCCGGCGGAGACGTGAGTGCTGGTGTAGTAGTAGCTTCCAGGCTTGC AGCCCAGATCACGGCCGTTCGTTGGGGCGAAACGGGCACAAACAAGACAA ACGACTTTCCCGCTCTAGAGTATTGGTTTGCAGGCCCCGGCGCATTGTCC CAAGGTTGCATGTTTCGAAGGCCTGCGCTTGGCCGTGCTCTCGTAAAGCA GGGCTCCCGAAGCGACGCGTCTGCACAAACACCCCCGTTCTGTGTACATG AACGGTGCGCCTGGGCGGCATACGGTCGCTTACAAGCATGGACGTGTCCC CCGTTCCCCCTGCTGGCATCCCGGCGTCCAATGCAGGTTGACCTTGCGGC CGAGAGAGAAGCGGAGCGTTTCGTTCGGCGTTGCAGGCCCGAGCTGGAAG ACTTCCCCCACCTGGTGACGGCCCTGGGAGCGCACGTTGCTCCTGCTCTG CGGGAGGCGAGGGAGGAGGTGGTCCGACGAGCAAACCAAGTGAGCCGGTC GGATCGGTCCGACGAACGACGTGCAGGCTTCGCACGCGGGTTGGGTCTCG AGTCTCTTCTTCAATTTAAGAAGCTGGCTTTCTTCGATGTGAAAGGCGTG TAAGCTTTGCTCTGCGTGTTGTGTCTTGAGTTTCTTGAAAAAAGCTGGTT TCAATGTGCAAATCTGGTACAGTTTTGCAAGCCGGTTGGGTCTGGCCGTG AGTCTCTCTGCTGAGAAGCTGGCTTGCTTCGATGTGTAAAGGTTGCAAGC TTTGCAAGCGGGTTGTGCCTTGAGTCTCTCCTTCTCGGAAGCCGGCTCGT TTCGACTCGACGATGATACACCATGAAAACTTCCCGCGGTCTCACCATTG TCCTCTTCACGGCTCCTGCGTTCCGGATTCGAAGCGCCTGGGCCGCGTCC CGGATCTTGATTGTGACGACCCCCCCTCTCCCTCCCTCCCTCCCTCCCCA ATGTGTTGGCATCTCTCGGCGATTGATCTAGAGGAGCAGCGCCGACAGCT TCCACGAGCGGGCGGATACGTTCGAGACGGCGTTTGAAACGAGCTACTTT GACTTCCAGCTGCGCTGCCGAGGAGTGCAAGCCCTTCGCAATTCTCTGCG ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCTCTGTGCCTAGGCATC CCGATGGCGGGGACGGTCCTCCCGTCAGCGGCAAAGATGGTTGTGGATCG GAAGGGCTCGCCGAGGAGTACTTGCTCAGGACGCTAGGAGCCCAGCTGGC CGAACTGGTGACCGCGAGAGAGTGCGAGAAGCTGGTGAGATTTTGATCCG GCTCCGTGCCGTACGGATCTATTAATAGCTCTCTTTGACATTTCTTTCGA GCATGGTATGCACAGCAGTGTGTCGAGATACTGTATGTCCGCGTGCGTGG TGCACGACAATGTGCTTGACCTTTGTGCTCATGATTAACCCTCTCGACCT CGTCAAACGGGTTGTGGATACGGAAATACTTTGATACCAGATGCCGTTGA CGGAACGTACCGGGGACTGATCGGGAGATGCGTCGCCTTCGAAGTGTGCG TGCATCTGGTGTGTCGGTGTAGCTGACGCTCCGGCTGCCCTTGCCTTTCA ACAGGGTATCCCGTTCGCTTCACAGGACGGAGGAGCATGCCGACGTCCAG AGGAGCGCATGCCTTTCATTTCCAAGGTTCGTTGGTGATATGAATATCGT TGGTCTCCCTCCGCGCGCACACACCCTTGAGCGAAGTGGCATCTCCCGCT ATCGGTGGGATCAACGAAGAGGCTTTGGGGGTACTGACAAGAACGAAGGA GGAATTTTCAAGTCCTGAAGGTGGCGAAAAGCGTTCACCACAGCTCCAAC AACATGACGTTGCAAGCAGCAGTGCTGCTGCACGCTGGCTTGACCTTATT ACAAGAGCGACAGCAGTTTCTGGAGATCGATCTTACGCCCAACCTCGTCG ACACCACGTACACGCCCGTTGCTAATCGCCGTCGCACGTTTATGCTTGGG GCGCGCGCTTTATTATTTGGCGTATCCGCAGGCTGCTTCTTCCGCTCTAG CCGAGGTGCTCTCCGGAGACGTGGCGAGATCCCTCGTGCGCCTGTGGCAG GCCGCGACGGCCGGCCGTCAGCTGTCGGATTTCTGTGAGACTCTCGAAGA GCAGGTATGTATGTATGTATGCCAACGCCTCCACGATAAAGGAAAATAAT AGAGAAGATGACAGCAGTGGCAGGTTGCGTCCGTCCTCGTCCGGGCCTGT CTGCGGCAGCGACCACGCCAAGTGCGTTCCTGCGCAGCTTTCGTCCGGGA CACCCTCTCTTCTTCTCTGCTGCCTGCTGTTGTATCGTTCCGAATCAATG AGCTTTGTAAGGTTGTTGCGTTTTGAGGCTCGCCTGTTGAAAGGGGTCTC GTGTCTCAGAAGGGTTCTTCCTTTCAGGCAGTGAGTCGTTCAGATGGACG GGTTAGCGTAGGAGAGGGTATCCGAAGTATTTTAGCGTTTCTTCTCCACG CTCTATGCATGCCTAACTTGAAGCGAACCACTTCTATGTCTTTGAGTCGC GATGTGGAAGTAGCGCCAGTTTTGGACAGGTTTCGCGATTCTTGGGTGTA TTACATTTGACGCGATTCGTGTCACGCGCATGGACGTAACCATAttTTTT TCGCGTAACTGAGGAGTTCTCTCACAATGCTCTTGTTCCGTTGCATAGTC GCAGCAAACTGGGTTTGTCGTGGCGCAAAGAATGTCGCGAGAGAGGCATG AACCACGCTGCAGCTCGTCAATGGTGTACTTTGAACCAGACTCGGAGAGA TGTCTATCGTTGAACTGTTTGTCCTTGTTTACCACCAGCTACATAAACTC GGCCCGACGCTCTGCCCATGTACTGTAGGTGTTCCCCGTGTGCAACCTGG TCGGTAGGCGTCTGGACAAGCGCCAAGAACGCCTGATGGTCGAAGACAGA CAGCGGGAGACGAAGGCGAGCTTGTTCCGAAGCGTCTCAGGTGCGACGAC GGTCGGAGGCGGTGGCCAGCCAACCTTCCATTACTCTTGCTTTCGTACGG CGACGTTGAAGTTGAACACGTGGATGTTGAGCAAACTGCTGTGGCGTTGC TTCGTTGTAGTTGGGAAGTTGTGGCCGGGCCTCGTAGCTTTGCGGTGGGC TACGTTATTCTATCATCACACAGCAGAATCTCGAAAGCGCATTCGTCCTT CTCCTCTGCGATCCCGCAAGAGACGCAGTCGATTTACGACGGcTATTTGA AAGGTAGGAAGAAACGATAGCTCTCAGCTTCAAAAAGCCGACCAAATGAA CGTGTACGTTTGACGGCACGACACGAGTGCCTGCCTTCTCCGCCGGCGAG ATTTTGACGCTCTCTTCCGCGTTGCCGCTTCTTCCTTGGGTGTGACTTGC CTCGCCCCCCCCCTCCAGAGCGAGACGTCTTCCACTTTGCCGCACTTGTG GTGTTCCAGAGCGTCACCGGGGCTACCCCCTTGCTTCCAACCCCGGGCCC CCCGCCGCCGGCGCAAGAAGATGGGCACGATAGCAGCAAGCAGCAGCAGC AGCAGCAGCAGCCCTGGGCCGGGGTGCTGCTAGACGCAGTTCGAGGACAT GTCTCTTCAGAGGCAGAAGAGTGTCTCTCCGGTCTCCAGCGGGAAATTCA GGTGAAGATGGGCGTTACCCTGCCCTGAGGGAGACATTTTTACGAGTTAC GAAGTACCAGTTGTTTCTTCGTGTGGGGGTCACCTGAATGTTTTTGGTTG GGTGGCGCCGCCGTTGGGGAACTAAGAATGGACAGCGGAGGGTTTTCGAT TGCGGCGCCGGCGGCGTTGAGCTTTTGCGTCGACCGGAGACACGAAATCT CTCCACGTTGTCGTTTGCTGCATGTTATCCTTCCTTGGAGTCATGGTTTG CTTCAGCCGGCCGCCAGGCGTGCAAATTTGATGTGTTGTAGGCGTCCCAT GGGCATCGGTCCCCTTCGGCAGTCGTCTTGAGGTTGTTGGACCAGAAGTC GGCAAGGATGTGCTTTCGAACGTTCGTTATACATATTTTGCATGTTGGCA ACACAGCAGTGGGCAAAGAAGACAACACCATTGACCACCTCACTGCCGTT GAGCTAATCCAACCGTTTTTTTTCTATTCCCTCGTCTTTTTTCGAAAGGC CTCTGAAGCTGTGGCTAGTTCGGCTGATGCCGGCGAGAGCGGCCGAGGCG CGGAAGAAGATTCTTCGGTTGGCAACAACGACGGCGTTGTTCGCGTCAAG GCTGGGAAGGCAGGGGGCAAGGACGCCGCCGCGGTTGTGCGGCTCATGGA GTCTGTAGAAGCTGCCCGCGTGCTGGGGATGGCATGCGGAGACTGAAACA TGTGGCTAATCATGGAGGAAAGAGGGGGCTATTTTACGCCGGCCACCATG CCACCATGCACCAAGTACATAGTAGCGTTAATTTTTTGTATACGTTTTGA AAGAGGACGCAGCTACTTCAGAAGGTAGTCTAGCCGTTCAAGGGAGAATC GTCGACGATTTTTCGTTAAATCGTCGTACGGCGGGGTGTGCGGTTGAGAG TTGAGAGTGTCGCCCGGCATGGCACGCACGCAAGCGCTGAACAGCATGCC ATTCTTCATATAGATAGATCGGACACGCTTGGCCATATACGGGAGACTTC ACCACCTGCGTCGTGCAAGTTTCGACTTTTTCCGTGTGTGGACGTTCAGT GTGTTGGATGATGTCGCCGATCTTCGTCTAGACCAATCAGGTTGTAAAGG GATTTCTCTGGCTGGCTGGCTGAAGACGTGCTTGCAAACACAACATGTCA AAGATACCCGCGGATGGATGCAAGATAGACCCGGAACTTAAAAACTTGCC AAAT
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:328757..338160+

>mRNA_Ecto-sp6_S_contig93.18475.1 ID=mRNA_Ecto-sp6_S_contig93.18475.1|Name=mRNA_Ecto-sp6_S_contig93.18475.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2025bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:328757..338160+ (Ectocarpus species6 EcLAC_371)
ATGAATGACCCAGGATCCCACCTCATGACGGCGCGAAAGCTCAAACTAGT
GAGCGGGGCCCTAGTGACGGAGGCCTACGAAAAGACGAAACGAGCCGAGC
TATGCTCGATTTGCTGCGCTGCGACGGAGCCGCGTTCGGTCGAAGAGCTG
ATGGAAGACTGTGATCTCCTACACTCAGAGGAGGAAGAGATGGCCCTCGA
GCTGCTGACCGGGTTAACGGAGTCGGGCGAGCTCGAGGGGTCGCTCGCTG
GCGGTGCGCGTGGTGCCCAAGCTTACGTTCCGGACTCCTTTGTGGCGGCC
CAGCACGAAGCCGCGCACGCCTTCTTCTCTGCCAACGACTACCTGGACCA
CGCCACCGCATCAGGCCTGCAGGTGCGCAAGCTTCACGCGTTTGTCAGGG
ACAGACACCCCGATGCCGTGCTCCTAGAGAAGGTGGTCGTGAGCAGTGCG
GTGGTCGAGCGGCTCCAGGCGGTGGCAGACGGGGCCGTTGCCGAAGCGTC
GTGGTTTGAGGCGTGGGCGGTAGTTCCAACCGTCCTGTCGGATGCCGATG
CGGCCCATCTGGTGGGAATGTGCGCCGCGTGTAAGCGTTCGGACGGGGAC
CCCCTGAAGGTCCTGCAGCTCGGGGTGTGTGGCGTAAGCGCAACGTTTGT
GCAAGGCATCATCGCCCAGTTTCGGGAGGAAGCCGTATCGGAGTCGAGTT
CCACCGCTGCTTCTGGCGGTGCATGGGGGGGCGAGGGGCACCCGGCTCGC
GCCAGCGCTAGCGGCGGCTCTTCCCGCAAGGGCGGCGGCAAGAATCGCAA
GAGAGGTGGTTCGAGGAAGCCCGGCGGAGACGTTGACCTTGCGGCCGAGA
GAGAAGCGGAGCGTTTCGTTCGGCGTTGCAGGCCCGAGCTGGAAGACTTC
CCCCACCTGGTGACGGCCCTGGGAGCGCACGTTGCTCCTGCTCTGCGGGA
GGCGAGGGAGGAGGTGGTCCGACGAGCAAACCAAAGGAGCAGCGCCGACA
GCTTCCACGAGCGGGCGGATACGTTCGAGACGGCGTTTGAAACGAGCTAC
TTTGACTTCCAGCTGCGCTGCCGAGGAGTGCAAGCCCTTCGCAATTCTCT
GCGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCTCTGTGCCTAGGC
ATCCCGATGGCGGGGACGGTCCTCCCGTCAGCGGCAAAGATGGTTGTGGA
TCGGAAGGGCTCGCCGAGGAGTACTTGCTCAGGACGCTAGGAGCCCAGCT
GGCCGAACTGGTGACCGCGAGAGAGTGCGAGAAGCTGGGTATCCCGTTCG
CTTCACAGGACGGAGGAGCATGCCGACGTCCAGAGGAGCGCATGCCTTTC
ATTTCCAAGGCTGCTTCTTCCGCTCTAGCCGAGGTGCTCTCCGGAGACGT
GGCGAGATCCCTCGTGCGCCTGTGGCAGGCCGCGACGGCCGGCCGTCAGC
TGTCGGATTTCTGTGAGACTCTCGAAGAGCAGGTGTTCCCCGTGTGCAAC
CTGGTCGGTAGGCGTCTGGACAAGCGCCAAGAACGCCTGATGGTCGAAGA
CAGACAGCGGGAGACGAAGGCGAGCTTGTTCCGAAGCGTCTCAGAGCGAG
ACGTCTTCCACTTTGCCGCACTTGTGGTGTTCCAGAGCGTCACCGGGGCT
ACCCCCTTGCTTCCAACCCCGGGCCCCCCGCCGCCGGCGCAAGAAGATGG
GCACGATAGCAGCAAGCAGCAGCAGCAGCAGCAGCAGCCCTGGGCCGGGG
TGCTGCTAGACGCAGTTCGAGGACATGTCTCTTCAGAGGCAGAAGAGTGT
CTCTCCGGTCTCCAGCGGGAAATTCAGGCCTCTGAAGCTGTGGCTAGTTC
GGCTGATGCCGGCGAGAGCGGCCGAGGCGCGGAAGAAGATTCTTCGGTTG
GCAACAACGACGGCGTTGTTCGCGTCAAGGCTGGGAAGGCAGGGGGCAAG
GACGCCGCCGCGGTTGTGCGGCTCATGGAGTCTGTAGAAGCTGCCCGCGT
GCTGGGGATGGCATGCGGAGACTGA
back to top