mRNA_Ecto-sp6_S_contig93.18457.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: A0A6H5KS33_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS33_9PHAE) HSP 1 Score: 305 bits (780), Expect = 1.680e-99 Identity = 150/154 (97.40%), Postives = 153/154 (99.35%), Query Frame = 3
Query: 81 MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEALAARGDSSGELHGGEQEGGADAGLRAEGGRQSS 542
MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKF+LTTHALRCVDRAGGID+YLLKTPDEWLNSVQGSKAKRKIEEALAARGDSSGELH GE+EGGADAGLRAEGGRQSS
Sbjct: 1 MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRKIEEALAARGDSSGELHAGEEEGGADAGLRAEGGRQSS 154
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: A0A7S3ZX50_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX50_9STRA) HSP 1 Score: 140 bits (352), Expect = 8.240e-36 Identity = 66/98 (67.35%), Postives = 80/98 (81.63%), Query Frame = 3
Query: 162 SKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEALAAR 455
S RS+ G+YAGKDI FGN ISFSH+K RRT+KPN Q+K L+SETL W++F+LTTHALRC+DRAGGID YLLKTPD L S+ G+ A+R IE A A+R
Sbjct: 60 SNRSKRGIYAGKDIRFGNNISFSHRKTRRTFKPNAQRKRLWSETLGCWLRFNLTTHALRCIDRAGGIDAYLLKTPDAKLGSIAGANARRMIEAARASR 157
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: A0A7S2C450_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C450_9STRA) HSP 1 Score: 129 bits (324), Expect = 4.810e-32 Identity = 59/99 (59.60%), Postives = 76/99 (76.77%), Query Frame = 3
Query: 162 SKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEALAARG 458
S R+ GLY GKD+GFGN +S S +K RR WKPNVQKK L+SE+L +W+KF++TT A+RCVD+AGG+D YLL D + S+QG AKR+IE ALA +G
Sbjct: 42 SGRAARGLYGGKDVGFGNMVSHSERKTRRMWKPNVQKKRLWSESLGDWVKFNVTTQAMRCVDKAGGLDNYLLGLKDGKIGSIQGLAAKRRIEAALAEKG 140
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: A0A7S2RZD4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZD4_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.750e-29 Identity = 64/127 (50.39%), Postives = 85/127 (66.93%), Query Frame = 3
Query: 162 SKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEALAARGDSSGELHGGEQEGGADAGLRAEGGRQSS 542
S R+ GL+ KDI FGN +S S +K RR+WKPN Q K L+SETL+E++KF TT+ L+C+D+ GG+D YLL+TPD+ LNS+ G AKR+IEE L R G G ++ + A EGGR SS
Sbjct: 18 SGRALRGLFGNKDIRFGNKVSHSERKTRRSWKPNAQNKRLWSETLEEFLKFKTTTYVLKCIDKVGGLDNYLLRTPDKKLNSITGLAAKRRIEEVLQQRQTLEGR---GLEDASSTAASSNEGGRISS 141
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: A0A7S2HHC9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHC9_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.920e-28 Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 3
Query: 162 SKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEALAAR 455
S R+ GL+ GKD+ FGN +S S +K RR WKPNVQ+K L+SETL ++++F++T HA+RCVD+AGG+D YLL PD+ L S QG AK KI E L A+
Sbjct: 16 SGRALRGLFGGKDVRFGNKVSHSERKTRRMWKPNVQRKKLWSETLQDYLRFNMTVHAMRCVDKAGGVDNYLLAIPDKDLKSDQGLAAKCKIIEKLQAK 113
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: A0A835YSL8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL8_9STRA) HSP 1 Score: 115 bits (289), Expect = 7.170e-27 Identity = 72/147 (48.98%), Postives = 89/147 (60.54%), Query Frame = 3
Query: 90 LRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEALAARGDSSGELHGGEQEG-GADAGLRAEG 527
+R++ V L+ R P +S RSQ G+YAGKD+ FGN FS KK+RR W PNVQ K L+SE L E I +TT ALR VD+AGG+D YLL T D+ L S Q S ++ EA+ GD E G E EG GADAGL +G
Sbjct: 5 VRQSAVKFLEGFTRASSKPNL--YSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIEEAGDEDDE-GGREGEGEGADAGLHVQG 148
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: G4YF32_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YF32_PHYSP) HSP 1 Score: 111 bits (278), Expect = 1.220e-25 Identity = 58/122 (47.54%), Postives = 78/122 (63.93%), Query Frame = 3
Query: 90 LRRNTVGCLQTLARGCKNPKKPQH-SKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEALAA 452
+ N++ L+ R K+ QH S R+Q GL+AG+D FGN +SFS ++ RR WK N Q K LYSE LDE + ++TTH LRCVD+ GG+D YLL DE V+G K + ++ EALAA
Sbjct: 1 MASNSMRFLEAFTRAAKH----QHVSGRAQRGLFAGRDKAFGNNVSFSKRRTRRAWKVNHQWKTLYSEALDEKVGLNVTTHTLRCVDKCGGLDNYLLSIKDERELGVKGLKTRDRVREALAA 118
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: A0A7S3K4M7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M7_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.340e-25 Identity = 48/95 (50.53%), Postives = 70/95 (73.68%), Query Frame = 3
Query: 150 KPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKI 434
K S R++ GLY KD+ GN++SFS +K RR WKPNVQ K +S+ L W++F +TTHA++C+D+ GGID+Y+L+TP+ LNS+ G+ AKR +
Sbjct: 33 KRHGSNRAKRGLYHLKDVRSGNSVSFSERKTRRKWKPNVQTKKFWSQILCCWLRFKVTTHAIKCIDKKGGIDKYILETPESKLNSIAGNNAKRML 127
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: F0WX23_9STRA (Uncharacterized protein AlNc14C340G10780 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX23_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.500e-25 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = 3
Query: 111 CLQTLARGCKNPKKPQH-SKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEALAAR 455
C++ L + KK +H S R++ GL+AG+D GFGN +S S ++ RR+WK N Q K LYSE LDE I ++TTH LRC+D+ GG+D YL DE V+G KAK +I EAL A+
Sbjct: 9 CMRFLQAFTRGSKKHEHISGRARRGLFAGRDKGFGNNVSHSKRRTRRSWKVNHQWKHLYSEALDEMIGLNVTTHTLRCIDKIGGLDNYLQSISDEQELGVKGLKAKNRIVEALKAQ 124
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Match: K3X5B7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5B7_GLOUD) HSP 1 Score: 108 bits (271), Expect = 1.240e-24 Identity = 62/125 (49.60%), Postives = 80/125 (64.00%), Query Frame = 3
Query: 81 MSLLRRNT-VGCLQTLARGCKNPKKPQH-SKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEALA 449
MS+ ++ + L+ R K+ QH S R+Q GL+AG+D FGN +SFS +K RR WK N Q K LYSE LDE I ++TTH LRCVD+AGG+D YLL E V+G KA+ +I EALA
Sbjct: 1 MSVFNASSAMSFLEAFTRAAKH----QHVSGRAQRGLFAGRDKAFGNNVSFSKRKTRRAWKVNHQWKHLYSEALDEKIGLNVTTHTLRCVDKAGGLDNYLLSLKKESDLGVKGLKARDRIVEALA 121 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18457.1 >prot_Ecto-sp6_S_contig93.18457.1 ID=prot_Ecto-sp6_S_contig93.18457.1|Name=mRNA_Ecto-sp6_S_contig93.18457.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=155bp MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSback to top mRNA from alignment at Ecto-sp6_S_contig93:133451..136874+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18457.1 ID=mRNA_Ecto-sp6_S_contig93.18457.1|Name=mRNA_Ecto-sp6_S_contig93.18457.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3424bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:133451..136874+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:133451..136874+ >mRNA_Ecto-sp6_S_contig93.18457.1 ID=mRNA_Ecto-sp6_S_contig93.18457.1|Name=mRNA_Ecto-sp6_S_contig93.18457.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=465bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:133451..136874+ (Ectocarpus species6 EcLAC_371)back to top |