mRNA_Ecto-sp6_S_contig92.18412.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig92.18412.1
Unique Name	mRNA_Ecto-sp6_S_contig92.18412.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

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BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: D7FPT4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT4_ECTSI)

HSP 1 Score: 697 bits (1799), Expect = 5.410e-234
Identity = 431/444 (97.07%), Postives = 431/444 (97.07%), Query Frame = 1

Query:   37 ATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQSGNSRKRKGAIASSMSSPSMPGSTKRSTSRTTAAAEPEGLEVLQLIAKGQALSSAVVVVEGVLHKMEEQ 1368
            ATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLR LGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA         TELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQS NSRKRKGAIASSMSSPSMPGSTKRSTSR TAA EPEGLEVLQLIAKGQALSSAVVVVEGVLHKMEEQ
Sbjct:    3 ATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRDLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA---------TELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQSANSRKRKGAIASSMSSPSMPGSTKRSTSRATAATEPEGLEVLQLIAKGQALSSAVVVVEGVLHKMEEQ 437

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BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A6H5L7J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J2_9PHAE)

HSP 1 Score: 689 bits (1779), Expect = 1.270e-229
Identity = 420/449 (93.54%), Postives = 425/449 (94.65%), Query Frame = 1

Query:   37 ATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQSGNSRKRKGAIASSMSSPSMPGSTKRSTSRTTAAAEPEGLEVLQLIAKGQALSSAVVVVEGVLHKMEEQARNRT 1383
            AT VG+LE+ TDG MELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLR LGCLSYFGGLTA+CFINVPNLTSVSGLD CCPGLESLNITECGLETT+GLEGLT XXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     EIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTE T+AGDDAASEGLTATDAAVTKGSSGCPATAQS N RKRKGAIASSMSSPS PGSTKRSTSR TAAAEPEGLEVLQLIAKGQALSSAV VVEGVLHKMEEQAR RT
Sbjct:   35 ATFVGELEKGTDGDMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTKGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNQLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEDTVAGDDAASEGLTATDAAVTKGSSGCPATAQSSNCRKRKGAIASSMSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEEQARIRT 483

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BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A5D6YI89_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YI89_9STRA)

HSP 1 Score: 147 bits (370), Expect = 3.440e-34
Identity = 156/337 (46.29%), Postives = 202/337 (59.94%), Query Frame = 1

Query:   70 DGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQR--ARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATI 1074
            + V   +   R   +     ++E+C  NGL+ + F R    + +LD+F+   R + C+ +F  L  +  ++ P +T++ GL   CP LE L +TECGLE T G+E   XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +   L    +L ++NLA N+L  FK LL L  LE L SL L D H+GDNPVC L NY+TY+ +HL++LT LD   +S  +K  A    +KK MYYNMR + +KR     I K SES R  A   TEL          +L  L  ++K +E R +A  A     NGD+ A +
Sbjct:   24 EAVASAAQLERAALYEASPELKELCRDNGLSASQFARRGAAVATLDMFLGFWRSMKCVMHFPALRELSIVHHPTITALEGLAH-CPNLEQLCVTECGLERTSGMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLESALSCCASLTDLNLADNRLCNFKSLLSLTSLERLTSLALSDPHYGDNPVCRLCNYQTYIMFHLSRLTCLDTVELSTRNKQIAEATMIKKKMYYNMRIKAIKRDTRARI-KHSESVRSQAEQQTEL----------SLAPLVREKKEIE-RYVADLAVRFETNGDSGAAV 347

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BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A7S1C613_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C613_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.240e-30
Identity = 128/269 (47.58%), Postives = 166/269 (61.71%), Query Frame = 1

Query:  121 DAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRAR 927
            D  ++E+C A+G+++    R+ H +  +DLF      +  L YF  L  V  I +P +  + GL E CP +E L ++EC L T        XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       IG  L     L  +NLA N +G FKE+  LA +  LR L   + HFGDNPVC L NY+TYV Y L  + +LD   ++E+SK  A   ++KK MYYNMR + +KR+  +VIR+A+E+ + R
Sbjct:    7 DDSLKELCTASGVSDTTLHRKPHTVEYVDLFQCHQVEMRSLQYFRNLREVILIQLPRVDVIEGL-EWCPLIERLWVSECNLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNSITAIGTALDRNTCLTSLNLADNGIGYFKEIHNLARVPSLRHLCFSEPHFGDNPVCNLCNYQTYVLYQLPHVDTLDTVALAEDSKQLAEATYIKKKMYYNMRIKTLKRNTTNVIRRATEALQGR 274

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BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A396ZXX6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZXX6_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.810e-30
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1

Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315

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BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A3L6V454_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V454_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.220e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1

Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315

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BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A418CNC1_9STRA (Uncharacterized protein (Fragment) n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CNC1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.250e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1

Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315

[Close]

BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A397D3J1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D3J1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.930e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1

Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315

[Close]

BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: W4H0H8_9STRA (Protein phosphatase 1 regulatory subunit 7 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0H8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.940e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1

Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315

[Close]

BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A425CTH0_9STRA (HTH CENPB-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CTH0_9STRA)

HSP 1 Score: 131 bits (330), Expect = 6.120e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1

Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FPT4_ECTSI	5.410e-234	97.07	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5L7J2_9PHAE	1.270e-229	93.54	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A5D6YI89_9STRA	3.440e-34	46.29	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A7S1C613_9STRA	1.240e-30	47.58	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A396ZXX6_9STRA	2.810e-30	49.07	Uncharacterized protein (Fragment) n=1 Tax=Aphanom...	[more]
A0A3L6V454_9STRA	3.220e-29	49.07	Uncharacterized protein (Fragment) n=1 Tax=Aphanom...	[more]
A0A418CNC1_9STRA	5.250e-29	49.07	Uncharacterized protein (Fragment) n=6 Tax=Aphanom...	[more]
A0A397D3J1_9STRA	5.930e-29	49.07	Uncharacterized protein n=3 Tax=Aphanomyces astaci...	[more]
W4H0H8_9STRA	5.940e-29	49.07	Protein phosphatase 1 regulatory subunit 7 n=1 Tax...	[more]
A0A425CTH0_9STRA	6.120e-29	49.07	HTH CENPB-type domain-containing protein n=1 Tax=A...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig92	contig	Ecto-sp6_S_contig92:294438..298670 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	704.5
Seed ortholog evalue	3.3e-200
Seed eggNOG ortholog	2880.D7FPT4
Model size	1395
Hectar predicted targeting category	other localisation
Exons	7
EggNOG free text desc.	axoneme assembly
EggNOG OGs	COG4886@1,KOG0531@2759
Cds size	1395
COG Functional cat.	L
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig92.18412.1	prot_Ecto-sp6_S_contig92.18412.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig92 294438..298670 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350561.305718-CDS-Ecto-sp6_S_contig92:294437..294472	1682350561.305718-CDS-Ecto-sp6_S_contig92:294437..294472	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig92 294438..294472 +
1682350561.316882-CDS-Ecto-sp6_S_contig92:295588..295669	1682350561.316882-CDS-Ecto-sp6_S_contig92:295588..295669	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig92 295589..295669 +
1682350561.3269062-CDS-Ecto-sp6_S_contig92:296055..296267	1682350561.3269062-CDS-Ecto-sp6_S_contig92:296055..296267	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig92 296056..296267 +
1682350561.3392544-CDS-Ecto-sp6_S_contig92:296524..296697	1682350561.3392544-CDS-Ecto-sp6_S_contig92:296524..296697	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig92 296525..296697 +
1682350561.349068-CDS-Ecto-sp6_S_contig92:297082..297349	1682350561.349068-CDS-Ecto-sp6_S_contig92:297082..297349	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig92 297083..297349 +
1682350561.3628016-CDS-Ecto-sp6_S_contig92:297621..297783	1682350561.3628016-CDS-Ecto-sp6_S_contig92:297621..297783	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig92 297622..297783 +
1682350561.3733857-CDS-Ecto-sp6_S_contig92:298205..298670	1682350561.3733857-CDS-Ecto-sp6_S_contig92:298205..298670	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig92 298206..298670 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig92:294438..298670+
coding sequence from alignment at Ecto-sp6_S_contig92:294438..298670+

protein sequence of mRNA_Ecto-sp6_S_contig92.18412.1

>prot_Ecto-sp6_S_contig92.18412.1 ID=prot_Ecto-sp6_S_contig92.18412.1|Name=mRNA_Ecto-sp6_S_contig92.18412.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=465bp
MKKTRRSMHSSGATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEA
NGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTS
VSGLDECCPGLESLNITECGLETTEGLEGLTGLTALHLSSNHLQSLDGVE
GMTRLKKLWANDNRITSMDGLSSLGALEDLWLCRNRLTEIGDGLPLGRTL
REVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYV
AYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIR
KASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLG
NGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQSGNSRKRKGAIAS
SMSSPSMPGSTKRSTSRTTAAAEPEGLEVLQLIAKGQALSSAVVVVEGVL
HKMEEQARNRTAWR*

mRNA from alignment at Ecto-sp6_S_contig92:294438..298670+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig92.18412.1 ID=mRNA_Ecto-sp6_S_contig92.18412.1|Name=mRNA_Ecto-sp6_S_contig92.18412.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4233bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:294438..298670+ (Ectocarpus species6 EcLAC_371)
ATGAAGAAAACAAGACGATCTATGCATAGCTCAGGGTAAGCTGTTGTGGT
GATGGACTGCTGCGGACTGCTGCTGTGCGTGGTGCCATTCTGTCCCACAT
CAGAGGTCAAAAGTACTACTGCTGCTGTGCATGCGTACATTGGATGCGGT
TGACAGGGGTATCGCTGACATTCCTGCAGGTGTCAGGTACTCAGGTGCTG
AGCTACCTAAGTCGCGCTGTAGTCTAGACTACTGCTGCAGCTGTGAACCG
ATTTCTGCGTACCAACAGGAGATGCATGCAGGTATTTTACTGCTGCATGC
TCCAAGAAGAGGAGACTCTGCCGTCGACGCTCGCTCGAGGTTTGTTGCGT
ACGATGCAGAAGCTACAGCAGTGGATAATTACTCGATTGAGGAGGGGTCG
TTCGTTTGGTGGGGACTCGCCCTTTTTGGTTGATGAAGCAACGTTGTTGG
CGCATGCATGCATGTGTTTTGGCATGGGGGACTTCGTGTTTGTCTGCTGG
CGTCTTCCTCTCCGTCTCTGCCCGCGCCCCGGCGTCGTCGTGTACTTCAA
CGCACAGTCCGGGTGGCTCAGTGATGGGGTAGAAGGTTGAACCTTCCAAG
CCTGCTGCCAGCAGTCGAAAGCGCTTTCCAATTTCCGTGTGCTGTCTGAC
ACTACCGAACTCCCCTTCGCGCACAATCGCCGCTCTAGGTACGCCCCAAT
ATAGCCCGCTGTGCCCTGTAGCGCGGTATGAGCAGGATTCAGCAGCAGAA
TGTACGTCTGCTGGTGCTGCTCAGTGGACACGATTACATAGCAGAGATGA
AAATATGAGAAGCAGTGTATTTCTCTCTGAACCGTGTGTACGACTACCGT
ACGGGCTCTGTGTGGCTGATGCACTTACTTGTAACAGACCTGTTGGTGCA
GATCAAAGCACCCACAACGTACACACCACGGTTACGATCCAACAGGGACC
CGGCGAGCCATCAGTGTACTCTCTCTTCGCGCTTGGTTGATTGGTTCAAT
CAAAGCAACTGATAGTTCAACACGTGCTCCGCCACGGTTCCATGCCTAAG
CAATGGAGCCCCGATGATAAAAAGGTTCCATTTTACTACTGTGACAACTA
TAACCGGGATGTGAAGAACGTCCACAACTGCTGCGCTGCTCCGTTTTGTA
GGGCGACCTCTGTCGGCGATCTCGAGGAGAATACAGATGGAGTCATGGAG
CTATCGATGGCCCTTCGTCTGAGAGCATTTCGGTAAGAGCGAAGGCATGC
TTATGCGAGGTGTTGGAGAAGTGTGGTATGTATGGCGCGGAAACGCAAAC
CTACAAGCAACGAGCGTACAGAAAGAACAGCGTCACACGCAGTTGTTGGA
CGAGGGATGATTTACCCTCTTCGACGACCAGGTGTCCAGCGTAAGCGTTG
CGGCCGCAATCTGCAGTAGCCTGCTGCAACAAAGGAGGAGTCAACTTGTT
GCCCCGTCCATCCTTGGCCACAGCACTTGCTGTGATGCTAGGTGATGATG
CCAACACGTACAGCAATAGACCTTCTGTTGACGGAGAAATACTCCCCCCT
TCCGCCCCGACAAACCCCTCCCTACCGACCGACTGCGTTGCTCTTGTTCC
CTTTCCGCAACACAACAGCGAGGACGCCGGAGTACGCGAGATATGCGAGG
CTAACGGCCTCAACGAGAATGCGTTTGTTCGGGAGAGTCACCTGCTGCGG
TCCTTGGATCTTTTTATGAGCGGCTTGAGGGGCTTGGGCTGCCTCAGCTA
CTTCGGAGGCCTTACAGCGGTCTGCTTCATCAATGTACCTAACCTCACCT
CTGTGTCAGGGCTGGACGAGTGCTGTCCTGGTCAGTACCATTTCTTTGAC
AGAGCTTGGCTACGATCGCAAGGGTAGCAGCAGATCACAACTTCGGGGCA
CATATCGAGTCCAGAATAGATGCCCTGTCCATGGGTATGGCATCGACACA
CATGTCAGTGCTTGCTGGAAATTGACAAAGTCCTTTTGACGACAGTGACG
GGTAGGGTCCGCACACTGCACTGACAGTTGTGCGTTTGTCATGTGCTAAA
AATTGCTGAGCCTTCAATGTTCGCGAATTTGTTGCAGGTCTAGAAAGCCT
CAACATCACTGAGTGCGGCCTAGAGACTACGGAAGGGCTGGAGGGTCTGA
CAGGCCTAACGGCCTTGCACCTGTCGAGCAACCACCTGCAATCTTTGGAT
GGGGTAGAGGGGATGACAAGGCTGAAGAAGTTGTGGGCTAACGATAATCG
CATAACGTCGGTGAGCGACCGCCCAGGGGAAAGATTCATGATCAAGGGTT
AATCTACGCCGCCGGTGATGCGAGTCAGAACAGGACGCATGGAAATATTG
ATTGGGTGTTTTATTTTGTGGCATGCGGTACCCAATCAATATGTGGCATG
CGGTAGCAGATGAGTATTGACCGGTTTAGCCTCGGTGTAACCAGTGGCGA
GCGTGTGGACCTACGTCACGTCTACGTGGAGGGCCGTCGAATGTGAGAGT
GGACCGGCAATCTTGAAGTTGTCGGGTGTTTAGATTCTTGTCAGGTGTAT
CAACCGCCATCCAGGTGACCCACGGTTACTCCCGTTCGTGTCTCCACGTT
GTACAACACCAACCTCCTTTTACAAACTCCAAAACGCACGCACAGATGGA
CGGGTTATCCTCTCTTGGGGCTCTCGAGGACCTCTGGCTGTGCCGTAACC
GGCTGACCGAAATTGGAGACGGCCTCCCACTGGGCAGAACCCTGCGAGAG
GTCAACCTTGCCCACAACCAGCTGGGATGTTTCAAGGAGCTCCTTAAGCT
CGCCCCGCTCGAAGGGCTGCGGAGCTTGACGCTCCAGGACATCCACTTTG
GCGACAACCCCGTGTGTGGGCTGTCCAACTACAAGACCTACGTCGCGTAC
CATTTGACGCAGGTACGTATTTTGTGGCTCGCCCGGATGGGTATAGGACT
GAGAGAGTCGGCGACTCTGGACAAGGCAGACGGCCGAGGGCACAGAAGCC
GCTTCGGCACAGATGTATTGCGGTGTATTATGCTCAATTGTTTCAGCGAT
GCTTGCACTCTGTTGGGTGTGTCCCATCCAATCTGGTACGTGTTTCTTGC
GCGGCAAACCGCTGCCGCAGGGTTTAGATTTTCGGTAAATATCGACGTAC
TTTGCCCCCCTGTTTTGGAAACACCTGCTTGCAGTTGACCTCGTTGGATA
TGGAGGTGGTCTCGGAGGAATCTAAGGCCTTCGCCAACACTGTCTTCCTC
AAGAAGAGCATGTACTACAACATGCGATCGCGGATTGTGAAGAGGCACGC
TGGGCACGTCATCCGAAAGGCGAGCGAATCTCAACGGGCACGCTTTGTCC
TACGGCAGTAGTTCGGTCGTCGTAGGTCCTTGTTGATAACGATGGGTCGC
CCACTTTGCACAGTAAGAATGGTCGGCCGCTTCCTAACAACTTCTCCAGC
TTCCCAAGGATGGCGTGATTTGAGGCATCGCGCGGAGGGGGCATGCTCCG
TCTCCACCCAAGCCGCCGCCGCCTGCACTCTGGAAATTCCGTTGCTCGCC
GGCCTTGAAACCCCTCTCCCTTTCGTGAGCATTCCATTTCCAGCGTGTAC
CGTACCAACCGACCCTTTTTTTCCGCGGCTCGGTTTCGGAAAACTCTAGC
TGTATCTTGATGCTTAAAACACTCACTTTTTCGTGGTTAGAACACTAACT
TGTTTTCGTGGTTGGGAACACTTGTTTTTTCGTGGTTGGAAAACGCTCAC
TTTTCGTCGTTGGAACAGGCTACAGAGCTCTGCGGGGAGAAGGCCGCCAA
CCTCCAGACCACGCTTATCCACCTCCAGTGGCAGAGGAAGCACGTAGAGC
AGCGGCTCATGGCCAGGCGCGCGGCCCATGACCTAGGCAACGGGGACACC
GAAGCCACCATTGCTGGCGACGATGCTGCCAGTGAAGGGCTTACCGCCAC
AGATGCGGCCGTCACAAAGGGGAGCAGCGGGTGTCCGGCAACAGCACAGA
GCGGCAACAGCAGAAAACGGAAGGGCGCAATCGCGAGCAGCATGTCATCG
CCCTCCATGCCTGGCAGCACCAAAAGGTCTACCTCTCGCACAACAGCAGC
GGCGGAGCCCGAAGGGCTGGAGGTGCTGCAGCTGATCGCGAAGGGGCAGG
CCCTCTCTAGCGCCGTGGTGGTGGTGGAGGGGGTGCTGCACAAAATGGAA
GAGCAGGCAAGAAATAGGACGGCTTGGAGGTAG

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:294438..298670+

>mRNA_Ecto-sp6_S_contig92.18412.1 ID=mRNA_Ecto-sp6_S_contig92.18412.1|Name=mRNA_Ecto-sp6_S_contig92.18412.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1395bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:294438..298670+ (Ectocarpus species6 EcLAC_371)
ATGAAGAAAACAAGACGATCTATGCATAGCTCAGGGGCGACCTCTGTCGG
CGATCTCGAGGAGAATACAGATGGAGTCATGGAGCTATCGATGGCCCTTC
GTCTGAGAGCATTTCGCGAGGACGCCGGAGTACGCGAGATATGCGAGGCT
AACGGCCTCAACGAGAATGCGTTTGTTCGGGAGAGTCACCTGCTGCGGTC
CTTGGATCTTTTTATGAGCGGCTTGAGGGGCTTGGGCTGCCTCAGCTACT
TCGGAGGCCTTACAGCGGTCTGCTTCATCAATGTACCTAACCTCACCTCT
GTGTCAGGGCTGGACGAGTGCTGTCCTGGTCTAGAAAGCCTCAACATCAC
TGAGTGCGGCCTAGAGACTACGGAAGGGCTGGAGGGTCTGACAGGCCTAA
CGGCCTTGCACCTGTCGAGCAACCACCTGCAATCTTTGGATGGGGTAGAG
GGGATGACAAGGCTGAAGAAGTTGTGGGCTAACGATAATCGCATAACGTC
GATGGACGGGTTATCCTCTCTTGGGGCTCTCGAGGACCTCTGGCTGTGCC
GTAACCGGCTGACCGAAATTGGAGACGGCCTCCCACTGGGCAGAACCCTG
CGAGAGGTCAACCTTGCCCACAACCAGCTGGGATGTTTCAAGGAGCTCCT
TAAGCTCGCCCCGCTCGAAGGGCTGCGGAGCTTGACGCTCCAGGACATCC
ACTTTGGCGACAACCCCGTGTGTGGGCTGTCCAACTACAAGACCTACGTC
GCGTACCATTTGACGCAGTTGACCTCGTTGGATATGGAGGTGGTCTCGGA
GGAATCTAAGGCCTTCGCCAACACTGTCTTCCTCAAGAAGAGCATGTACT
ACAACATGCGATCGCGGATTGTGAAGAGGCACGCTGGGCACGTCATCCGA
AAGGCGAGCGAATCTCAACGGGCACGCTTTGCTACAGAGCTCTGCGGGGA
GAAGGCCGCCAACCTCCAGACCACGCTTATCCACCTCCAGTGGCAGAGGA
AGCACGTAGAGCAGCGGCTCATGGCCAGGCGCGCGGCCCATGACCTAGGC
AACGGGGACACCGAAGCCACCATTGCTGGCGACGATGCTGCCAGTGAAGG
GCTTACCGCCACAGATGCGGCCGTCACAAAGGGGAGCAGCGGGTGTCCGG
CAACAGCACAGAGCGGCAACAGCAGAAAACGGAAGGGCGCAATCGCGAGC
AGCATGTCATCGCCCTCCATGCCTGGCAGCACCAAAAGGTCTACCTCTCG
CACAACAGCAGCGGCGGAGCCCGAAGGGCTGGAGGTGCTGCAGCTGATCG
CGAAGGGGCAGGCCCTCTCTAGCGCCGTGGTGGTGGTGGAGGGGGTGCTG
CACAAAATGGAAGAGCAGGCAAGAAATAGGACGGCTTGGAGGTAG