mRNA_Ecto-sp6_S_contig92.18397.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: D7FPU9_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU9_ECTSI) HSP 1 Score: 800 bits (2065), Expect = 1.950e-285 Identity = 558/582 (95.88%), Postives = 561/582 (96.39%), Query Frame = 2
Query: 182 MEEMIAGKLLGLAAVAANSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGKRKMTPDDRKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGNQHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGIQLPDDNWAEEVRETIPEEPLPEYLAALWDFAEGKIHSTSKAPGSGVASSSXXXXXXXX--PVSPPATPRMPSAGAFRQSRQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPLAGSMAMSVLSEQASKQPAAAPATAAGADPAVAAASNPGQALEDASALCAFMEAAQTRSVKRVRVAPQQQQQRRKDGNTSTEGAKQMQAQPRGWSDQGSTTSESRGGSDLSEEDAANERKSAEGSGASTLSXXXXXASSRDSGAVLPPEFWTSRQVLERYVLPRQQLLQG 1921
MEEMIAGKLLGLAAVAANSA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGKRKMTPDDRKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAG+QHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGIQLP+DNWAEEVRETIPEEPLPEYLAALWDFAEGK HSTSKAPGSGVAS XXXXXXXX PVSPPATPRMPSAGAFRQSRQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X X SPPLAGSMAMSVLSEQASKQPA APATAAGADP VAAASNPGQALEDASALCAFMEAAQTRSVKRVRVAPQQQ RKDGNTSTE AKQMQAQPRGWSDQGSTTSESRGGSDLSEEDAANERKSA+GSGASTLSXXXXX SSRDSGAVLPPEFWTSRQVLERYVLPRQQLLQG
Sbjct: 1 MEEMIAGKLLGLAAVAANSAAADLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGKRKMTPDDRKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGSQHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGIQLPEDNWAEEVRETIPEEPLPEYLAALWDFAEGKSHSTSKAPGSGVASXXXXXXXXXXXXPVSPPATPRMPSAGAFRQSRQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPXRPX-SPPLAGSMAMSVLSEQASKQPAVAPATAAGADP-VAAASNPGQALEDASALCAFMEAAQTRSVKRVRVAPQQQXXXRKDGNTSTESAKQMQAQPRGWSDQGSTTSESRGGSDLSEEDAANERKSADGSGASTLSXXXXXXSSRDSGAVLPPEFWTSRQVLERYVLPRQQLLQG 580
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: A0A6H5L2A4_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A4_9PHAE) HSP 1 Score: 355 bits (911), Expect = 1.880e-115 Identity = 244/275 (88.73%), Postives = 247/275 (89.82%), Query Frame = 2
Query: 179 MMEEMIAGKLLGLAAVAANSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGKRKMTPDDRKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGNQHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 1003
MMEE+IAGKLLGLAAVAANSA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGKRKMTPDDRKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDH TAGVLLALSCSP+QCQEGPAGNQH SSRSSPALKLPKAAATPAASRSSKGS RDWG+EVASHEDALRKITQEFERMDGSQQAGD XXX SR AKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM
Sbjct: 1 MMEEVIAGKLLGLAAVAANSAAADLAATGVESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGKRKMTPDDRKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHHTAGVLLALSCSPQQCQEGPAGNQHQSSRSSPALKLPKAAATPAASRSSKGSSRDWGQEVASHEDALRKITQEFERMDGSQQAGDXXXXXXXXXXXXXXXSRAAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 275
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: A0A6U4EHK2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EHK2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 9.050e-13 Identity = 89/242 (36.78%), Postives = 112/242 (46.28%), Query Frame = 2
Query: 380 GKRKMTPDDRKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGNQHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHED------ALRKITQEFERM-DGS-QQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGIQLPDDNWAEE 1081
G+ P K +R R RERNR+HARKTRQRKKQ ++ELQ +I L+ E L Q D TA VLL +S G A S S KL EEV E A + E DG ++ DE+ K R K T +R +RRERNRMHAKRTR+RKKLF+E +I KM+ EN Q+ +R SG++LP+ EE
Sbjct: 156 GRSSSPPPQTKVKEVERVHRMRERNRMHARKTRQRKKQQMKELQARIDKLKHEGTLLRQHIFDRYTANVLLVMS--------GKADRSETSQLS----KL---------------------EEVMDREGINCLLGAASALQPRLEMTADGKLKETAPDED-------KDYKPRRRGKYTPEERDRVRRERNRMHAKRTRDRKKLFLEESENLIFKMEEENVQMRRYLRQSGLELPEQLLREE 357
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: A0A7S4VPU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPU5_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 8.470e-10 Identity = 73/216 (33.80%), Postives = 112/216 (51.85%), Query Frame = 2
Query: 443 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGNQHPSSRSSPALK-----LPKAAATPA----------ASRSSKGSGRDWGEEVA-SHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRA 1042
RERNR+HARKTRQRKK+H+Q LQ + L+Q++ +L Q + TA +LL + C K G +G+ P R LK +P A+ P + + G+ EE+A + +A+ + + G+ G D E G +K T ++ +RRERNRMHAKRTR+RK++F+E VMI +++ EN L+ + +
Sbjct: 11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEK----GESGDVDP--RVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALP-----VAGNPNDGIDYELL---------GKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGENQVLQSHLNS 206
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: BZP14_PHATC (bZIP transcription factor 14 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=BZP14_PHATC) HSP 1 Score: 71.6 bits (174), Expect = 1.860e-9 Identity = 77/226 (34.07%), Postives = 109/226 (48.23%), Query Frame = 2
Query: 407 RKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLAL-----SCSPKQ-----------CQEGPAGNQHPSSRSSPALKLPKA-------AATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVEN 1015
+KA DR R+RERNR+HARKTRQRKK+ +Q L+ + L+ E+ RL Q+ + TA +L+ L S SP + +E P ++ P PAL LP A P + S + GEEVAS D +GD+++ G +K T + +RRERNRMHAKRTR+RK++F E + M ++ EN
Sbjct: 112 KKADTDDRVQRSRERNRIHARKTRQRKKEQMQSLEGRATDLKHEQIRLKQIINEKNTANILVGLFSKGQSQSPNEDPRVEALMYRSVEEIPDPSKIPEL---PALILPGQHASKKIKVAVPVVAASPQSMSDGGGEEVASTSDV----------------SGDEQQVPDDGIDYDLLGKDRSKCTPEELDQIRRERNRMHAKRTRDRKRIFTEEMAEMCRILEEEN 318
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: A0A7S4W4V3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W4V3_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.010e-9 Identity = 73/216 (33.80%), Postives = 112/216 (51.85%), Query Frame = 2
Query: 443 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGNQHPSSRSSPALK-----LPKAAATPA----------ASRSSKGSGRDWGEEVA-SHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRA 1042
RERNR+HARKTRQRKK+H+Q LQ + L+Q++ +L Q + TA +LL + C K G +G+ P R LK +P A+ P + + G+ EE+A + +A+ + + G+ G D E G +K T ++ +RRERNRMHAKRTR+RK++F+E VMI +++ EN L+ + +
Sbjct: 11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEK----GESGDVDP--RVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALP-----VAGNPNDGIDYELL---------GKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGENQVLQSHLNS 206
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: A0A7S4RSS5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RSS5_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.860e-9 Identity = 73/216 (33.80%), Postives = 112/216 (51.85%), Query Frame = 2
Query: 443 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGNQHPSSRSSPALK-----LPKAAATPA----------ASRSSKGSGRDWGEEVA-SHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRA 1042
RERNR+HARKTRQRKK+H+Q LQ + L+Q++ +L Q + TA +LL + C K G +G+ P R LK +P A+ P + + G+ EE+A + +A+ + + G+ G D E G +K T ++ +RRERNRMHAKRTR+RK++F+E VMI +++ EN L+ + +
Sbjct: 183 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEK----GESGDVDP--RVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALP-----VAGNPNDGIDYELL---------GKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGENQVLQSHLNS 378
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: A0A6U2ACZ3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2ACZ3_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 5.950e-9 Identity = 78/234 (33.33%), Postives = 106/234 (45.30%), Query Frame = 2
Query: 443 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGNQHPS-----SRSS------------PALKLP--------KAAAT---PAASRSSKGSGRDWGEEVASHEDALRK---ITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGI 1051
RERNR+HARKTRQRKK+H+Q LQ + L+ E+ RL Q + TA +LL + G A + +P RS+ PAL LP KAAA PAA+ G G + E+ L I E D S K T ++ +RRERNRMHAKRTR+RK++F+E VMI +++ EN L+ + +
Sbjct: 32 RERNRMHARKTRQRKKEHMQSLQNRADELKNEQLRLKQAINEKNTASILLGMFSRDGPASGGSAKDVNPKVEELLRRSAEEIPDASKIPELPALILPGQHNSKKNKAAAQMQPPAAAAPLDGGGLEGSPEMGPQHGGLMPDDGIDYELLSKDRS------------------------KCTPAELDRIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLESENGLLQGHLEGLSV 241
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: A0A835ZF21_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF21_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 9.540e-9 Identity = 82/264 (31.06%), Postives = 115/264 (43.56%), Query Frame = 2
Query: 425 DRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPA---GNQHPSSRS--SPALKLPKAAATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSD-----RTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGIQLP--------------DDNWAEEVRETIPEEPLPEYLAALWDFA 1144
DR+ R+RERNRLHARKTRQRKK ++ LQ +I L++E L + + G L + A G Q P + +L +AA A DW +++ H AL + MD A + AA XXX R LRRERNRMHAKR R+RKKL V+A + ++ + NA +R + + LP +AE+ +PLPE + LW++A
Sbjct: 23 DRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEA-------DWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAED---DAASDPLPEDVFELWEYA 276
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Match: A0A7S2L7Q6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L7Q6_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.430e-8 Identity = 79/242 (32.64%), Postives = 112/242 (46.28%), Query Frame = 2
Query: 443 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLL--------------------ALSCSP-------KQCQEGPAGNQHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHE--DALRKITQEFERMDGSQQA--GDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGIQLPDDNWA 1075
RERNR+HARKTRQRKK+H+Q+LQ + L+ E+ RL Q + TA +L+ A+S P + +E P ++ P PAL LP +S S+ G+ D A+ D E E+ DG G D + T A + +RRERNRMHAKRTR+RK++F+E MI +++ ENA L+ + PD+N A
Sbjct: 18 RERNRMHARKTRQRKKEHMQQLQNRADELKLEQIRLKQCINEKNTANILVGLFQTGEDSAAADGSDDTETAVSMDPQVEVLLKRPTEEIPDASKIPEL---PALILPGQHTKRKSSSSNDGASEDNTPTAAAAPAADGEGVTIPEGEQEDGIDYVLLGKDRGSCTPA----------------ELDQIRRERNRMHAKRTRDRKRIFMEEMETMIKQLEDENALLQGHMDKLNENNPDENIA 240 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18397.1 >prot_Ecto-sp6_S_contig92.18397.1 ID=prot_Ecto-sp6_S_contig92.18397.1|Name=mRNA_Ecto-sp6_S_contig92.18397.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=582bp MMEEMIAGKLLGLAAVAANSAAADLAAAGVESEEEEEDRCSWSRDGGGDTback to top mRNA from alignment at Ecto-sp6_S_contig92:186723..191120- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18397.1 ID=mRNA_Ecto-sp6_S_contig92.18397.1|Name=mRNA_Ecto-sp6_S_contig92.18397.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4398bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:186723..191120- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:186723..191120- >mRNA_Ecto-sp6_S_contig92.18397.1 ID=mRNA_Ecto-sp6_S_contig92.18397.1|Name=mRNA_Ecto-sp6_S_contig92.18397.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1746bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:186723..191120- (Ectocarpus species6 EcLAC_371)back to top |