mRNA_Ecto-sp6_S_contig92.18395.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: D7FPV1_ECTSI (Similar to U3 small nucleolar RNA interacting protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPV1_ECTSI) HSP 1 Score: 678 bits (1749), Expect = 1.440e-239 Identity = 508/521 (97.50%), Postives = 512/521 (98.27%), Query Frame = 1
Query: 1 MPPKRSIGAAGSRGMSPRTGSSRGKSSRQEPRTAKRPRQQAQSALAWGEDDPDAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPGDYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSVKAHSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLQQVASVPLEGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSGAEDEGAVAMDTESAEEDQGDIDGEEAG 1563
MPPKRSIGAAGSRGMS RTGSSRG+SSRQEPRTAKRPRQQAQSALAWG+DDPD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPGDYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSVKAHSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KKPA+LVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSL+QVASVPLEGFVNGLAVSS GKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSGAEDE AVAMDTESAEEDQGDIDGEEAG
Sbjct: 1 MPPKRSIGAAGSRGMSSRTGSSRGRSSRQEPRTAKRPRQQAQSALAWGDDDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPGDYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSVKAHSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMKKKPAMLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLEQVASVPLEGFVNGLAVSSTGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSGAEDEVAVAMDTESAEEDQGDIDGEEAG 521
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: A0A6H5KZR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZR0_9PHAE) HSP 1 Score: 295 bits (754), Expect = 4.020e-93 Identity = 173/291 (59.45%), Postives = 178/291 (61.17%), Query Frame = 1
Query: 691 EVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLQQVASVPLEGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSGAEDEGAVAMDTESAEEDQGDIDGEEAG 1563
+VLTLAVSGDGRYLASGGRDRLINVWDCRTDT+VETF A+ S +R V KKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSL+QVASVPLEGFVNGLAVSS GKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSG EDEGAVAMDTESAEEDQGDIDGEEAG
Sbjct: 6 KVLTLAVSGDGRYLASGGRDRLINVWDCRTDTLVETFRGHQDTVSSLAFRANSL---------------------------------ALFSGSHDRCVKVRLWKVLEDSHLVFRPVGGGSIDCVRMLNEDWFTTGGEDGSLALWFAMK------KKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLEQVASVPLEGFVNGLAVSSTGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSGVEDEGAVAMDTESAEEDQGDIDGEEAG 257
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: A0A835Z4V0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V0_9STRA) HSP 1 Score: 270 bits (690), Expect = 1.020e-80 Identity = 213/430 (49.53%), Postives = 264/430 (61.40%), Query Frame = 1
Query: 274 ETAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPGDY---------------------IGDRLAHARLEATGQLYREVAKGLQGQQISP-TAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSV--------KAHSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLQQVASVPLEGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPL 1473
ETAEEKRLRLA++ L KL E G+DE D A GD + RL RL A+GQL R +A L+G +S T +R + GH+L+ TCV LS DD TAFSGSKDN+++RWDVETG R + W+K P + + + H EVL +A S DGRY+A+GGRD+L+ VWDCRTD VV +F E+NA+D++R+ER V+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KKP + AAHG G+ W+ A ++ SDL V+GS+DG +RLW D +AR+L+QV ++PL GFVNGL+V+S G+F VAAVGQ+HRLGRWE QK ARN +C+VPL
Sbjct: 34 ETAEEKRLRLAQEYLAKLGGEL------GSDE--DAAAGDXXXXXXXXGEDGVINRGVSEDRLARRLERERLAASGQLQRRLAAALRGADLSDATRIRALSGHRLAVTCVALSGDDATAFSGSKDNAVLRWDVETGARKVLCARWKKRPAAERAAXXXXXXXXEQEHCAEVLAIAASTDGRYVAAGGRDKLVRVWDCRTDEVVASFSGHRDAVTALAFRHGSYSLYSGSADRSIKHWGLSEMAYVETLFGHQGEVNALDAFRRERAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNLKKKPVAVAAAAHGVGRNGVAPWVCAAAAVRSSDLAVTGSSDGYIRLWHCDTDARTLEQVNAIPLAGFVNGLSVASTGRFAVAAVGQDHRLGRWERQKDARNRVCIVPL 455
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: A0A8K1FMR6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMR6_PYTOL) HSP 1 Score: 216 bits (550), Expect = 6.050e-60 Identity = 184/404 (45.54%), Postives = 242/404 (59.90%), Query Frame = 1
Query: 271 RETAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPGDYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVP-SVKAHSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLQQVASVPLEGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPS 1479
RETA+EKRLRLA++ L K+ ++ + E+ T E+ + RL LEA G+L+++VA + + + R ++GHKL T + LS D TAFS +KD +I+RWD+ T + +L LP + + K H + VL LA++ DG+YLASGG D+L+ VWD + V+ETF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +N +D+ KER+V+ KKPA +VP AHG RWIS++ + ++DLV SGS DGS+RLWRAD+ AR+L+ V +PLEGFVNGL G+FL+A VGQEHRLGRWE K +N + ++ LPS
Sbjct: 79 RETAQEKRLRLAKEYLSKITEQEDDXXEDTTGVEE------RVTARLHQDALEAMGKLFKQVASKYEEFEFDTDSTRFLKGHKLPVTALCLSEDGKTAFSAAKDGTILRWDLATQTKTKLL-----LPKDDISKATKDHERCVLALALNSDGKYLASGGYDKLLRVWDAEKNEVIETFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGLDALYKERVVSCGRDRSVRMWKIPEETQLVFYGNTGSMDCVKMINDEYYVTGGDDGSLSLWFNGR-KKPAYVVPNAHGAG-----RWISSVTVMPRTDLVASGSCDGSIRLWRADLGARTLEPVGEIPLEGFVNGLCFDQKGRFLLAGVGQEHRLGRWERIKHVKNGLAIIALPS 465
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: W7U1Y2_9STRA (U3 small nucleolar rna-interacting protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1Y2_9STRA) HSP 1 Score: 207 bits (528), Expect = 2.680e-56 Identity = 186/438 (42.47%), Postives = 234/438 (53.42%), Query Frame = 1
Query: 274 ETAEEKRLRLARDVLMKLDAEQ-RENREEGTDEEDDDAPGDYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRV-TMLPHWRKLPGGKVPSVKAHSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTD--------TVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------KKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADV----EARSLQQVASVPL-EGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSGAEDEGAV 1503
ETA E R+RLA+ L +++A EN EE + +ED D D +G L RL+A+G L R +A L + ++GHKL+PTCV ++ D+ TAF+G KDN+I+R+D+E+G+R T+ WR GG+ ++H KEVL LAVS DGRYLA+GGRD+ I +WD R V+TF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EIN ID+WR+ER VT KKP +VPAAHG G RWIS++ +K +DLV SGSNDG VRLWRA + SL+ + L G+VNGLA G LVAA G+EHRLGRW +K A N + V+ LP E AV
Sbjct: 87 ETAAEMRVRLAKQYLAQMEAALGSENDEEESHDEDTDRGKDSMGALLERERLKASGSLRRALAGRLSNFSAATVPTHILKGHKLAPTCVTITADERTAFTGGKDNAILRYDLESGRRTATLSSFWR---GGQ--GYQSHEKEVLALAVSSDGRYLAAGGRDKEIRIWDLRGRGHREGLVLKPVKTFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMYVETLFGHQAEINGIDAWRRERPVTCGRDRSVRVWKLADESHMLLQCPQGVGGGGASKGLVMGGSLDCLSMLSEECFVTGGEDGMLAMWNVNKKKPVAVVPAAHG----GNSRWISSVAAIKGTDLVASGSNDGYVRLWRASTTPQGQGSSLESTGAALLCPGYVNGLAFGHSGSVLVAACGKEHRLGRWAPEKGAVNGLYVMRLPDERMGEDAV 515
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: D0MYR8_PHYIT (U3 small nucleolar RNA-interacting protein, putative n=9 Tax=Phytophthora TaxID=4783 RepID=D0MYR8_PHYIT) HSP 1 Score: 205 bits (521), Expect = 4.960e-56 Identity = 166/414 (40.10%), Postives = 228/414 (55.07%), Query Frame = 1
Query: 277 TAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPG--DYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSVKAHSKE---VLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLQQVASVPLEGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPS--GAEDEG 1497
TA+EKRLRLA++ L K+ A+ E GTD+EDD+ G + +G RL LEA G+L+++VA + + + ++GH+L T + L D TAFS +KD S++RWD+ K+ + LP V + KA + + VL LA S DG++LASGGRD+L+ VWD + E+F XXXXXXXXXXXXXXXXXXXXXXXXXXXX +N +DS KER+V+ KKP ++P AH +WIS++ + ++DLV SGS+DG +RLW+AD++ RSL VAS+PLEGFVN L + +FL+A VGQEHRLGRWE + K +N I ++ LPS G ++EG
Sbjct: 63 TAQEKRLRLAKEYLGKITAQ-----EAGTDDEDDEGDGVEERVGARLQQDALEAMGKLFKKVAADYSEFEFDADSTKFLKGHRLPVTSLCLLEDGKTAFSAAKDGSLLRWDLAQQKKTKLT-----LPKDDVAAEKATTDKGRCVLALAASSDGKFLASGGRDKLVRVWDVEKGELQESFAGHRDAVSALAFRLRSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGLDSLYKERVVSCGRDRSVRMWKIPEETQLVFYGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNGR-KKPVCVIPNAHD------GKWISSVAVMPRTDLVASGSSDGQIRLWQADLQGRSLTPVASMPLEGFVNALCFDAKARFLLAGVGQEHRLGRWE-KLKVKNGIAIIALPSIDGEQEEG 458
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: A0A5D6XNE3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNE3_9STRA) HSP 1 Score: 202 bits (515), Expect = 5.780e-55 Identity = 178/430 (41.40%), Postives = 242/430 (56.28%), Query Frame = 1
Query: 274 ETAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPGDYIGD--------RLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSVKA-HSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLQQVASVPLEGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSGAEDEGAVAMDTESAEEDQ 1536
ETA+EKR+RLA++ L K+ A Q + T +ED+DA D RL LEA G+L+R A + + R + GH+L T V L+ D TAFS SKD +I+RWD+ + + LP V + K H K VL LA+S DG++LASGG D+L+ VWD ++E+F XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E++ +DS KER+V+ KKP +VP AHG +W++++ + ++DLV SGS+DG +RLW+AD++ R L VA++P+ G+VN L S +FL+A VGQEHRLGRWE K+ +N I ++ LP+ ++E A ++ SA ED+
Sbjct: 75 ETAQEKRVRLAKEYLDKVRA-QEGGANDATSDEDEDADATVFKDGVEEKVSARLQRDALEAMGKLFRAAADSFAEFEFDTDSTRFLPGHRLPVTSVCLADDGKTAFSASKDGAILRWDLAAQTKTRLA-----LPSDDVATAKMDHEKSVLALALSSDGKFLASGGCDKLVRVWDAEKSELLESFKGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVHGLDSLYKERVVSCGRDRSVRMWKIPEETQLVFYGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNGR-KKPVHVVPHAHGAG-----KWVASVAVMPRTDLVASGSSDGLIRLWKADLKERKLAPVATIPVPGYVNALVFDSKARFLLAGVGQEHRLGRWERLKRVKNGIAIIALPN-VDEEAASESESASASEDE 491
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: A0A662XPF7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPF7_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.000e-54 Identity = 156/405 (38.52%), Postives = 219/405 (54.07%), Query Frame = 1
Query: 280 AEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPG--DYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSVKAHSKE---VLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLQQVASVPLEGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPS 1479
A+EKR+RLA++ L K+ A++ ++ +E+ DA G + +G RL LEA G+L+++VA + + + ++GH+L T + L D TAFS +KD S++RWD+ K+ + LP + + A + + VL LAVS DG+YLASGGRD+L++VWD + + E+F XXXXXXXXXXXXXXXXXXXXXXXXX E+N +DS KER+V+ KKP ++ AHG +WIS++ L ++DLV SGS+DG +RLW+AD+ RSL VA++PLEG+VN L +FL+A VGQEHRLGRWE KK +N I +V LPS
Sbjct: 70 AQEKRMRLAKEYLTKITAQEAGGTDDEEEEDAADATGVEERVGARLQQDALEAMGKLFKKVAADYAAFEFDTDSTKFLKGHRLPVTSLCLLEDGKTAFSAAKDGSLLRWDLAAQKKTRL-----SLPKDDIAAETATTDKQRCVLALAVSSDGKYLASGGRDKLVHVWDVEKNELQESFSGHRDAISALAFRLRSHSLFXXXXXXXXXXXXXXXXXXXXXXXXXQGEVNGLDSLYKERVVSCGRDRSVRMWKIPEETQLVFYGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNGR-KKPVCVIANAHG------GKWISSVAVLPRTDLVASGSSDGFIRLWQADLHERSLTPVATIPLEGYVNALCFDLKARFLLAGVGQEHRLGRWEKLKKVKNGIAIVALPS 462
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: A0A8C5TBY7_9PASS (Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5TBY7_9PASS) HSP 1 Score: 199 bits (506), Expect = 4.020e-54 Identity = 167/403 (41.44%), Postives = 221/403 (54.84%), Query Frame = 1
Query: 274 ETAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPGDYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSVKAHSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPAVLVPAAHG-YSAVGI--PRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLQQVASVPLEGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPL 1473
ET +EK+LRLA+ L +L R+ EE +EE+D P D IGDRL LE G+L R VAK ++P ++R +RGH+L TC+V+SPD+ FS SKD ++I+W+V++GKR+ ++P +K G H+ VL +A+S DG+YLA+G R++LI +WD T + F XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX KKP L AHG A G+ P WISA+ L+ SDL+ +GS+ GSV+LW+ R L+ + +P+ GFVN L S+ G FLVA +GQEHRLGRW K+A+N IC++PL
Sbjct: 41 ETPQEKKLRLAKQYLEEL----RQLEEERAEEEEDLEPADLIGDRLKEDVLEQKGRLQRLVAK-----DVNPASIRVLRGHQLPVTCLVISPDNRFIFSASKDGALIKWEVDSGKRLCVVPGGKK---GTEERHMGHASHVLCMAISSDGKYLATGDRNKLIMIWDAATCKRLHIFTGHRDAVSGLSFRKGTHQLYSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEESQLVFSGHQGSIDCIQLINEEHMVSGADDGSLALWGLTKKKPLALARQAHGEQDAQGLQQPYWISAVAALRNSDLLATGSHSGSVKLWKCGEGFRKLEHLWDIPVVGFVNSLKFSATGDFLVAGIGQEHRLGRWWRMKEAKNSICIIPL 431
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Match: UPI0018D5899B (U3 small nucleolar RNA-interacting protein 2 n=1 Tax=Motacilla alba alba TaxID=1094192 RepID=UPI0018D5899B) HSP 1 Score: 201 bits (512), Expect = 2.230e-53 Identity = 172/403 (42.68%), Postives = 222/403 (55.09%), Query Frame = 1
Query: 274 ETAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPGDYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSVKAHSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPAVLVPAAHG-YSAVGI--PRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLQQVASVPLEGFVNGLAVSSIGKFLVAAVGQEHRLGRWEHQKKARNEICVVPL 1473
ET +EK+LRLA+ L +L R+ EE ++E++ P D IGDRL LE G+L R VAK +Q P +R +RGH+L TC+V+SPDD FS SKD S+I+W+V++GKR+ ++P +K G H+ +VL +A+S DG+YLA+G R++LI +WD T + F XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX KKP L AHG A G+ P WISA+ L+ SDLV +GS+ GSV+LW+ R L+ + +PL GFVN L S+ G FLVA VGQEHRLGRW K+A+N IC++PL
Sbjct: 225 ETPQEKKLRLAKQYLEEL----RQLEEERAEDEEELEPADLIGDRLKEDVLEQRGRLQRLVAKDVQPPD--PARIRVLRGHQLPVTCLVISPDDRFIFSASKDGSLIKWEVDSGKRLGVVPGGKK---GTEERHMGHASQVLCMAISSDGKYLATGDRNKLIMIWDAATCKRLHIFTGHRDAVSGLSFRKGTHQLYSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEESQLVFSGHQGSIDCIQLINEEHMVSGADDGSVALWGLTKKKPLALARQAHGEQDAQGLQQPCWISAVAALRNSDLVATGSHSGSVKLWKCGEGFRKLEHLLDIPLVGFVNSLKFSAAGDFLVAGVGQEHRLGRWWRIKEAKNSICIIPL 618 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18395.1 >prot_Ecto-sp6_S_contig92.18395.1 ID=prot_Ecto-sp6_S_contig92.18395.1|Name=mRNA_Ecto-sp6_S_contig92.18395.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=522bp MPPKRSIGAAGSRGMSPRTGSSRGKSSRQEPRTAKRPRQQAQSALAWGEDback to top mRNA from alignment at Ecto-sp6_S_contig92:176605..180632- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18395.1 ID=mRNA_Ecto-sp6_S_contig92.18395.1|Name=mRNA_Ecto-sp6_S_contig92.18395.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4028bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:176605..180632- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:176605..180632- >mRNA_Ecto-sp6_S_contig92.18395.1 ID=mRNA_Ecto-sp6_S_contig92.18395.1|Name=mRNA_Ecto-sp6_S_contig92.18395.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1566bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:176605..180632- (Ectocarpus species6 EcLAC_371)back to top |