prot_Ecto-sp6_S_contig90.18337.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig90.18337.1
Unique Nameprot_Ecto-sp6_S_contig90.18337.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length403
Homology
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BLAST of mRNA_Ecto-sp6_S_contig90.18337.1 vs. uniprot
Match: A0A6H5K2H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H6_9PHAE)

HSP 1 Score: 657 bits (1696), Expect = 1.690e-235
Identity = 346/402 (86.07%), Postives = 358/402 (89.05%), Query Frame = 0 
Query:    2 MACWRIWALFSLLVLPGNSSQCAKKEGSNWHVFQNAIEASGLAGEDGIANILADLRTGALSQPVPHTYVVVGGGEWGPRVVAEALLESVYERWSNDVVMLDMAEQAAFWGPSSNLDKAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGEDLRVLDTMLSLIDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRLPGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPSLVPEGTKSAWQDARKGPAPEGVLDRANGVWREVVKAERGIRTALREADRDTLQAVGVVATAAAVFACAVYFREAS-GAIGTFRDAAKGGSAGDSNDXXXXXXXXXXXGHNKEKAVASRGGSNQDDPSRTTADGPQPQARSNSDGPSMRVTRNRGRHPVETGTPGPGT 402
            MACWRIWALFSLLVLPGNSSQCAKKEGSNWHVFQNAIEA+GLAGEDGIANILADLRTGALSQPVPHTYV+VGGGEWGPRVVAEALL+SVYERWSNDVV+LDM EQAAFWGPSSNLD+AQEQLNRQLCVAI+RCVGRAVVVLDNVHLLQGEDLRVLDTMLSL DGRKSNMECNGHKVSGEGCLFLLLLNEEGSE MKRL GKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEP+ VP  TKSAWQDARKGPAPEGVLDRANGVWREVVK ERGIRTALRE DR+TLQAVGVVA AAAV ACAVYFREA+ GAIGT   A KGGS GDS             G  K+KAV SRGGS  DD S TTADG +  A  +SDGPSM VTRNRGRHPVETGT GPGT
Sbjct:   44 MACWRIWALFSLLVLPGNSSQCAKKEGSNWHVFQNAIEAAGLAGEDGIANILADLRTGALSQPVPHTYVIVGGGEWGPRVVAEALLDSVYERWSNDVVVLDMEEQAAFWGPSSNLDEAQEQLNRQLCVAIKRCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEGMKRLSGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPTFVPAETKSAWQDARKGPAPEGVLDRANGVWREVVKVERGIRTALREMDRETLQAVGVVA-AAAVLACAVYFREAALGAIGTIGGATKGGSPGDSE--GGGNDKKKGPGRIKDKAVGSRGGSGNDDSSETTADGVECHAPGDSDGPSMTVTRNRGRHPVETGTHGPGT 442
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BLAST of mRNA_Ecto-sp6_S_contig90.18337.1 vs. uniprot
Match: D7FL46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL46_ECTSI)

HSP 1 Score: 494 bits (1272), Expect = 3.240e-173
Identity = 274/301 (91.03%), Postives = 275/301 (91.36%), Query Frame = 0 
Query:  103 MAEQAAFWGPSSNLDKAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGEDLRVLDTMLSLIDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRLPGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPSLVPEGTKSAWQDARKGPAPEGVLDRANGVWREVVKAERGIRTALREADRDTLQAVGVVATAAAVFACAVYFREA-SGAIGTFRDAAKGGSAGDSNDXXXXXXXXXXXGHNKEKAVASRGGSNQDDPSRTTADGPQPQARSNSDGPSMRVTRNRGRHPVETGTPGPGT 402
            M EQAAFWGPSSNLDKAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGEDLRVLDTMLSL DGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRL GKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPS V EGTKSAWQDARKGPAPEGVLDRANGVWREVVK ERGIR ALREADRDTLQAVGVVATAAAV ACAVYFREA SGAI +FRDAAKGG AGDSND XXXXXXXXXX              NQDDPSRTTADGPQPQARSNSDGPSMRVTRNRGRHPVETGTPGPGT
Sbjct:    1 MEEQAAFWGPSSNLDKAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRLSGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPSFVREGTKSAWQDARKGPAPEGVLDRANGVWREVVKVERGIRMALREADRDTLQAVGVVATAAAVLACAVYFREAASGAIVSFRDAAKGGPAGDSNDGXXXXXXXXXXXXXXXXXXXXXXXXNQDDPSRTTADGPQPQARSNSDGPSMRVTRNRGRHPVETGTPGPGT 301
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig90.18337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2H6_9PHAE1.690e-23586.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL46_ECTSI3.240e-17391.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..402
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.841

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig90contigEcto-sp6_S_contig90:334571..340278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig90.18337.1mRNA_Ecto-sp6_S_contig90.18337.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig90 334504..341357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig90.18337.1 ID=prot_Ecto-sp6_S_contig90.18337.1|Name=mRNA_Ecto-sp6_S_contig90.18337.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=403bp
MMACWRIWALFSLLVLPGNSSQCAKKEGSNWHVFQNAIEASGLAGEDGIA
NILADLRTGALSQPVPHTYVVVGGGEWGPRVVAEALLESVYERWSNDVVM
LDMAEQAAFWGPSSNLDKAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQG
EDLRVLDTMLSLIDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRLP
GKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPSLVPEGTKSAWQDAR
KGPAPEGVLDRANGVWREVVKAERGIRTALREADRDTLQAVGVVATAAAV
FACAVYFREASGAIGTFRDAAKGGSAGDSNDGGGNDNRRKGSGHNKEKAV
ASRGGSNQDDPSRTTADGPQPQARSNSDGPSMRVTRNRGRHPVETGTPGP
GT*
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