mRNA_Ecto-sp6_S_contig90.18325.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig90.18325.1
Unique NamemRNA_Ecto-sp6_S_contig90.18325.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: D7G6K7_ECTSI (Transient Receptor Potential Channel. C terminally truncated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6K7_ECTSI)

HSP 1 Score: 561 bits (1445), Expect = 1.040e-192
Identity = 271/292 (92.81%), Postives = 282/292 (96.58%), Query Frame = 3
Query:  714 AILLEIFERLPRTVCAFDEETKGGCTGMFEPQILGGHQPLGFERPIDMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDGGEDVLSGCKNFLARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGDDGISDVEFTWGEGSFAAIFISAGVYREGLEISMGIDKDFKDQWNILDGLAVLCLSVGLIIRGVDWTSPWGPAFYALSAPLFVCRVLFFAQVLPFQGPMIK 1589
            A+LLEIFERLPRTV AFDEETKGGCTGMFEPQILGGH PLGFERP++MILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDGGEDV SGCK+ L+RLSVLLQAAQDDLPNLAFFPGAQF VAGVAADPSTYYRVPAMRMLLDFVAYV +IAALGYLVFFHSPTGGVLGDDGIS+VEFTWGEGSFAAIFISAGVYREGLE+SMGIDK FKDQWN+LD LA+LCLSVGL+IRGVDWTSPWGPAFYALSAPL VC VLFFAQVLPFQGPMIK
Sbjct:  238 ALLLEIFERLPRTVRAFDEETKGGCTGMFEPQILGGHHPLGFERPVNMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDGGEDVPSGCKSILSRLSVLLQAAQDDLPNLAFFPGAQFAVAGVAADPSTYYRVPAMRMLLDFVAYVEIIAALGYLVFFHSPTGGVLGDDGISNVEFTWGEGSFAAIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCSVLFFAQVLPFQGPMIK 529          
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 2.360e-86
Identity = 162/297 (54.55%), Postives = 196/297 (65.99%), Query Frame = 3
Query:  717 ILLEIFERLPRTVCAFDEET-KGGCTGMFEPQIL---GGHQPLGFERPIDMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDGGEDVLSGCKNFL--ARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGDDGISDVEFTWGEGSFAAIFISAGVYREGLEISMGIDKDFKDQWNILDGLAVLCLSVGLIIRGVDWTSPWGPAFYALSAPLFVCRVLFFAQVLPFQGPMIK 1589
            +LLE+FERLP+TV  F+E+     CT + EP+++    G   LG   P+DMI+S   Q+ TFC VPL+MDFLS +F  GLPDL DT G+L+N   L  L    +  D     L G    L  A L  + Q   D+ P L F PGAQF+VA + A P+ YY VPAMRMLLDFV YV M+AAL Y V FHS TG   G DGI+D  F+  EG+ A IFI+AG YREG E+  GI   FKDQWN+LD L +L L VGL+IR  DWTS WGPAFYALSAPL V RVLFFAQ+L FQGPM++
Sbjct:  572 MLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLG--GPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGLGLDGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQ 866          
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 6.830e-79
Identity = 155/302 (51.32%), Postives = 192/302 (63.58%), Query Frame = 3
Query:  717 ILLEIFERLPRTVCAFDEET-KGGCTGMFEPQILG---GHQPLGFERPIDMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDG---GEDVLSGCKNFLARLSVLLQAAQ----DDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGDDGISDVEFTWGEGSFAAIFISAGVYREGLEISMGIDKDFKDQWNILDGLAVLCLSVGLIIRGVDWTSPWGPAFYALSAPLFVCRVLFFAQVLPFQGPMIK 1589
            +LLE+FERLP+TV  F+E+     CT + EP+++    G   LG   P+DMI+S   Q+ TFC VPL+MDFLS +F  GLPDL DT G+L+N   L  L    +  D    G D +      +A L+ LL+  +    D+ P L F PG QF+VA + A P+ YY VPAMRMLLDFV YV M+A L   V FHS T    G DGI     +  EG+ A IFI+AG YREG E+  GI   FKDQWN+LD L +L L VGL+IR  DWTS WGPAFYALSAPL V RVLFFAQ+L F GPM++
Sbjct:  589 LLLEMFERLPQTVRGFEEQAGMDSCTNVLEPELMRATTGSNDLG--GPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHHLWYLEEDGLFRDEHGFGSDGIP-----VALLAALLKGVRQGIWDNTPILTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQ 883          
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.460e-66
Identity = 155/395 (39.24%), Postives = 208/395 (52.66%), Query Frame = 3
Query:  567 QELLLAGSDNRGQPLHAGLIAFY*ACRSCERGERGRTKTHGRDPG*R*GAILLEIFERLPRTVCAFDEETKGGCTGMFEPQILGGHQPLGFERPIDMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGD------GGEDV---------------------------------------LSGCKNFLARLS---VLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPT--GGVLG--DDGISDVEFTWGEGSFAAIFISAGVYREGLEISMGIDKDFKDQWNILDGLAVLCLSVGLIIRGVDWTSPWGPAFYALSAPLFVCRVLFFAQVLPFQGPMIKEN 1595
            ++  L    +   P   GL+       + E+   G  +    D      A+LLE+ ERLPR+V +F+ +    C  MFEP+ L   +   FE+P++M+LS+Q+Q   FCNVPLVMDFL R+F   LP L+D + VL +S ++  L  G V GD       G DV                                       L G K+ LA       LLQ A D  P+L  FPGAQ +VAG+AA P+ Y+RVPAMRM+LD V Y+ MI AL   V FHS      V G  D+ +      W E + A IFI  GV++EG E++    +  +DQWN LD L++L L++GL+ R VDW S  GPAFYAL+APL V R LFF Q+ P QGPMI+ +
Sbjct:  480 KDCCLDAVTSAANPFIPGLVLSIRLAEAAEKANEGERRAI-TDIQESVNALLLEVLERLPRSVRSFERDMDD-CRDMFEPKFLDVFED--FEKPLEMMLSRQQQRELFCNVPLVMDFLKRKFTLSLPRLRDPKEVLADSNEILHLSRGGVKGDVCLVLDWGVDVDVQKEDGHLNDEQIDXXXXXXXXQADDHASLRPPWKHPTLFGSKSLLASFRSPRALLQGANDRFPSLTPFPGAQVIVAGLAARPNDYFRVPAMRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQAS 870          
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 1.050e-50
Identity = 140/379 (36.94%), Postives = 184/379 (48.55%), Query Frame = 3
Query:  579 LAGSDNRGQPLHAGLIAFY*ACRSCERGERGRTKTHGRDPG*R*GAILLEIFERLPRTVCAFDEETKGGCTGMFEPQILGGHQPLGFERPIDMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAG-----------LVLGDGG---EDVLSGCKNFLARLS-----------------------VLLQAAQ-----DDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGDDGISDVEFTWGEGSFAAIFISAGVYREGLEISMGIDKDFKDQWNILDGLAVLCLSVGLIIRGVDWTSPWGPAFYALSAPLFVCRVLFFAQVLPFQGPMIK 1589
            +A SDN   P     IAF  +      GER +  +       R   +LLEI ERLP+TV  FD    G C+ +FEP+ L      G   P+ + L +++ + TFC  PL+ DFLSRRF +GLP L+DT+ +L +  +L  L  G           L L + G   ED  S  +  L  L                        +LLQ A      +   +L F PGAQF +AG+   P  YYRVPAMRMLLD   Y+ M+     +V FH             D   T GE +FA  +I AG+  EG E+         D WNILD L +  ++ GLI+R  D  + WG A YALSAPL   R+LFFAQ+L F GPMI+
Sbjct:  569 VACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQE----RVDTLLLEILERLPQTVQGFDGGMTG-CSAVFEPE-LSREDARGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHE------------DGPLTPGEAAFA-FYILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQ 928          
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 2.170e-49
Identity = 126/349 (36.10%), Postives = 189/349 (54.15%), Query Frame = 3
Query:  561 RIQELLLAGSDNRGQPLHAGL---IAFY*ACRSCERGERGRTKTHGRDPG*R*GAILLEIFERLPRTVCAFDEETKGGCTGMFEPQILGGHQPLGFERPIDMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDGGEDVLSGCKNFLARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGDDGISDVEFTWGEGSFAAIFISAGVYREGLEISMGIDKDFKDQWNILDGLAVLCLSVGLIIR---GVDWTSPWGPAFYALSAPLFVCRVLFFAQVLPFQGPMIK 1589
            R++E LL    +   P   G+   +A   A R    GE+ R  +           +LLE+ E +P+TV  F  E +  C+ +FEP+ +      G++ P+ ++LSK++QM T+C +PLV+DF+SR+F  GLP L+DTEGVL N+      G  L     G+ +L+  + F   +++    A   L ++ +FPGA+F++AG+ + P +YY+VPA+RM LD V Y+ M+   G  V  H       GD       F W E  F  ++I  G+  E  EI     +  +DQWN+LD  ++  L  G+I R    VD  S    A YALSAPL   R+LFF Q+LP QGP+I+
Sbjct:  677 RLKESLLGAISSADNPFIPGMNLSVACTMATRRAMEGEKRRLASMQAAID----ELLLEVLEHMPQTVKGFKGEMRD-CSAIFEPETVISRFH-GYQGPLHVVLSKRQQMETYCTIPLVLDFMSRKFTKGLPSLRDTEGVLLNNTSFTEPGQTLY----GDGLLAEGRVFFFGMALQRSYAGGTLSSITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFGGFVILHDA-----GDT------FDWMEIVFT-MYIFGGILTEFREILDDPWEYMRDQWNLLDVASLTLLLGGVIQRMYGQVDDQS--SRALYALSAPLAFARILFFVQILPSQGPIIQ 1001          
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 3.540e-48
Identity = 129/350 (36.86%), Postives = 191/350 (54.57%), Query Frame = 3
Query:  561 RIQELLLAGSDNRGQPLHAGL---IAFY*ACRSCERGERGRTKTHGRDPG*R*GAILLEIFERLPRTVCAFDEETKGGCTGMFEPQILGGHQPLGFERPIDMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDL-KCLGAGLVLGDGGEDVLSGCKNFLARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGDDGISDVEFTWGEGSFAAIFISAGVYREGLEISMGIDKDFKDQWNILDGLAVLCLSVGLIIR---GVDWTSPWGPAFYALSAPLFVCRVLFFAQVLPFQGPMIK 1589
            R++E LL    +   P   G+   +A   A R    GE+ R  +           +LLE+ E +P+TV  F  E +  C+ +FEP+ +      G++ P+ ++LSK+EQM T+C +PLV+DF++R+F  GLP L+DTEGVL +++   + L  G +L +G        K F   +++    A   L ++ +FPGA+F++AG  + P +YY+VPA+RM LD V Y++M+   G  V  H       GD   SD    W E  F  ++I  G+  E  EI     +  +DQWN+LD  ++  L  G I R    VD  S    A YALSAPL   R+LFFAQ+LP QGPMI+
Sbjct:  925 RLKESLLGAISSANNPFIPGMNLSVACTTATRRAMEGEKRRLASMQAAVD----ELLLEVLEHMPQTVKGFKGEMRD-CSAIFEPETVISRFH-GYQGPLHVVLSKREQMETYCTIPLVLDFMTRKFTKGLPSLRDTEGVLLSNKGFTQTLYGGGLLAEG--------KVFFFGMALQRGYAGGALSSITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHEA-----GDT--SD----WLEIVFT-MYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDES--SRALYALSAPLAFARILFFAQILPSQGPMIQ 1246          
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: A0A6H5KIV5_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIV5_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 4.700e-32
Identity = 99/312 (31.73%), Postives = 149/312 (47.76%), Query Frame = 3
Query:  717 ILLEIFERLPRTVCAFDEETKGG-----CTGMFEPQILGGHQPL----------GFER----PIDMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGA--GLVLGDGGEDVLSGCKNFLARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGDDGISDVEFTWGEGSFAAIFISAGVYREGLEISMGIDKDFKDQWNILDGLAVLCLSVGLIIRGVDWTSPWGPAFYALSAPLFVCRVLFFAQVLPFQGPMIK 1589
            ++LE+FERLP+TV  F E   GG     C+ +F P+ +                G  R    P++M L  + Q+  FC  PLV+D+L+R F  GLP L  +E   + ++  K L      V  + G+   SG       L  +L+ +   L +L    G QF++A V A P+  Y VPA+RM +D + Y+ M+A     V ++       G   + +V F         +++   +  E  E+  G ++  KD WN LD  A+       ++R  D  S WG A Y   APL + R LFFAQ +P QGPMI+
Sbjct:  234 LVLEVFERLPQTVDGFREGDVGGSGMDACSVVFAPEKIRPRDETIPSHLFQDGTGGTRVDSGPLEMALQARHQLELFCTQPLVLDYLNRAFTRGLPGLDASETGAQEADQFKLLMQRNASVQVNAGDGESSG--EVSRELLEVLEGSHSVLGSLTLSAGKQFILAQVVARPAFSYSVPAVRMAVDLLVYLLMLALFAKDVLWYKE-----GTVEVGEVVFF--------VYVLGAILVEITELWDGREEYMKDHWNALDVAALAFCGGAFLVRVYDPESLWGRALYCAGAPLLLFRTLFFAQFMPAQGPMIE 530          
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 4.200e-31
Identity = 106/299 (35.45%), Postives = 148/299 (49.50%), Query Frame = 3
Query:  576 LLAGSDN---RGQPLHAGLIAFY*ACRSCERGERGRTKTHGRDPG*R*GAILLEIFERLPRTVCAFDEETKGG---CTGMFEPQILGGH-QPLGFERPIDMIL-SKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCL-GAG-----LVLGDGGEDVL----------------SGCKNFLARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGDDGISDVEFTWGEGSFAAIF--ISAGVYREGL 1376
            ++A SDN    G  L    +         ERG     + H         A+LLEI ERLP+TV  F+    GG   C+ +  P+      +  GF+ P+ ++L +   Q  TFC+ PL+MD+LSR+F  GLPD+ D +GVLRN  +   L G+G     LV+G G ++ L                +G K        LLQ A D L +L F PGAQF +AG  A P+ YYR+PA+RM+LD V Y+ +I AL  LVF  S +              T GEG  AA+   ++A + R G+
Sbjct:   55 VVAASDNLFISGMTLSVARVDVTKKAPEGERGTLEAIQGHVH-------ALLLEILERLPQTVNGFN----GGMADCSAVLGPEFDSKTGESTGFKPPLALLLLANSIQTETFCSTPLIMDYLSRKFTHGLPDVGDKDGVLRNGTEHDVLSGSGPGMMSLVIGGGDDEELDERGYHEFRHKDLLVKNGLKASFESPRALLQGANDRLASLTFLPGAQFAIAGFLAKPNNYYRIPAVRMVLDVVVYLLVIIALSILVFRDSGS-------------LTRGEGIAAAVIFAMTAQLVRFGI 329          
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 3.240e-26
Identity = 67/139 (48.20%), Postives = 87/139 (62.59%), Query Frame = 3
Query: 1191 MRMLLDFVAYVAMIAALGYLVFFHSPT--GGVLG--DDGISDVEFTWGEGSFAAIFISAGVYREGLEISMGIDKDFKDQWNILDGLAVLCLSVGLIIRGVDWTSPWGPAFYALSAPLFVCRVLFFAQVLPFQGPMIKEN 1595
            MRM+LD V Y+ MI AL   V FHS      V G  D+ +      W E + A IFI  GV++EG E++    +  +DQWN LD L++L L+VGL+ R VDW S  GPAFYAL+APL V R LFF Q+ P QGP+I+ +
Sbjct:    1 MRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTVGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPIIQAS 139          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig90.18325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G6K7_ECTSI1.040e-19292.81Transient Receptor Potential Channel. C terminally... [more]
D7FZR6_ECTSI2.360e-8654.55Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5KBU4_9PHAE6.830e-7951.32Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJG3_9PHAE1.460e-6639.24Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
D7FLB1_ECTSI1.050e-5036.94Ankyrin Repeat Transient Receptor Potential Channe... [more]
D8LT30_ECTSI2.170e-4936.10Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5LDE6_9PHAE3.540e-4836.86Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KIV5_9PHAE4.700e-3231.73Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JCX0_9PHAE4.200e-3135.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUV2_9PHAE3.240e-2648.20Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig90contigEcto-sp6_S_contig90:143233..148492 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score109.8
Seed ortholog evalue2.1e-21
Seed eggNOG ortholog2880.D8LPZ1
Model size1597
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.calcium ion transmembrane transport
EggNOG OGsKOG3676@1,KOG3676@2759
Ec32 ortholog descriptionTransient Receptor Potential Channel pseudogene
Ec32 orthologEc-05_006560.1
Cds size834
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig90.18325.1prot_Ecto-sp6_S_contig90.18325.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig90 143233..147201 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350551.1956508-CDS-Ecto-sp6_S_contig90:143232..1433521682350551.1956508-CDS-Ecto-sp6_S_contig90:143232..143352Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 143233..143352 +
1682350551.206096-CDS-Ecto-sp6_S_contig90:144312..1444411682350551.206096-CDS-Ecto-sp6_S_contig90:144312..144441Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 144313..144441 +
1682350551.215005-CDS-Ecto-sp6_S_contig90:144867..1449961682350551.215005-CDS-Ecto-sp6_S_contig90:144867..144996Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 144868..144996 +
1682350551.2242613-CDS-Ecto-sp6_S_contig90:146745..1472011682350551.2242613-CDS-Ecto-sp6_S_contig90:146745..147201Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 146746..147201 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350551.2339087-UTR-Ecto-sp6_S_contig90:147201..1477191682350551.2339087-UTR-Ecto-sp6_S_contig90:147201..147719Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig90 147202..147719 +
1682350551.2430975-UTR-Ecto-sp6_S_contig90:148247..1484921682350551.2430975-UTR-Ecto-sp6_S_contig90:148247..148492Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig90 148248..148492 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig90.18325.1

>prot_Ecto-sp6_S_contig90.18325.1 ID=prot_Ecto-sp6_S_contig90.18325.1|Name=mRNA_Ecto-sp6_S_contig90.18325.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=278bp
MLTATDQLGHTILTAAVSSKSVGTFEAVFNAAKRYFHRGQFAKMLSAKDQ
LGHTILTATVSSHSEDTCKTVFNVAKEYLNQEQLWLLIKSQGTDGATLLS
AAVRSGSVNMFEATLGYALEYLGHHEVADEPCSRLDALFEACVEDLLNAH
PEDVDSGFKTLSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTTA
ANPFMPGLLLSIRLAEAAKEANEGEQRHMDEIRASVEALYCSKYSSAYLE
RSARSTKRRRVAAPACSSRRFWEATNP*
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mRNA from alignment at Ecto-sp6_S_contig90:143233..148492+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig90.18325.1 ID=mRNA_Ecto-sp6_S_contig90.18325.1|Name=mRNA_Ecto-sp6_S_contig90.18325.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5260bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:143233..148492+ (Ectocarpus species6 EcLAC_371)
ATGCTGACGGCGACAGATCAACTTGGACACACGATACTTACGGCGGCAGT GTCGAGCAAGAGCGTGGGCACTTTCGAGGCTGTCTTCAATGCAGCCAAGA GGTACTTCCACCGTGGGCAGGTACGAGATGGTTTGTGCCAGGGTGGTTGC AAAGATTTCCCTTCGGTCAGCAGGCTTCCTGTTTGTGCCCTGGGTATTCT GTCGTATCATCGTGCACCATTGTTGTTGTTGTTGTCTTTATATTGAAAAC CGTTCCGGTCTCCGCCTGGTACCTTCTTATACCCGTAGTGGCCCAACTGA TGCAGACGATTTTGGTGATCACTAGCCAACTACCTAAAGTTCGAGAACGC CATCCATATTTGAAACGGTGGATCATGAGGCCCAGCACGAAAGGCCGACC GCAACCACGCTGAAAAACGGTAGCAAGAAAAAGGCAAGGTAGATGGGAGT TTGCCAAGGAAAGGGTCCACGTATCACGACGGACCGCACACTAGATGTGC CGGTGTGCACGAAGTCTCACGGAAACACGGAGTATAAACAAAGTCTGGAC TACACAGAACATGTAGTGCTTGACGCCTGCTGTGGTATTACTTTGGGAGA AGTCTTGACCCAATCTGGTATTATACATACGTGTTGTTGGTCCCACTTCG AGGTAGCAAGTCAATACAGATTCGCCGGTTACAAGCGCAAGGTTTTTCTG TACGTGGGAACCTACTTCTGATGAACTGCCCGTTTGTGGATTGTGTACTG GTTCCTCCCAGCCGTGGTTGATGATCCGAATCGAAAGATGGAGAAGGGGA AAAGCTGTTACCGGCAGTACTTCAAAGCGGGAGCAGCAAGCTGCCCGAAC CGATCCTAGACCATGCATATTGCGGTCACAATTCTGCTAAGCGCCGTTCG CCCACAACGATTGGCTTCTCTCTGGCCGAGAGCTCATGATTCAGACCGTA GCCGTTAAAGGATGGTCCATTTGAAGAATTGGACGAGTCTCACTTTCTTG CCGTAGGACAAGGTGTCGCAGCTCTTTTCCGTGGATGAAGGTAACATTGC TATGCTCCCGCTTTCGGCCGTCCATATCAGTTTGCTAAAATGCTATCGGC GAAAGACCAACTCGGACACACGATACTTACGGCGACAGTTTCGAGCCACA GCGAAGACACTTGCAAGACTGTCTTCAATGTAGCCAAGGAGTACCTCAAC CAAGAGCAGGTGCGACACGTTTGTGGCGGAACACCTTTGAAGTGTATCTT TCGGATGGCAGGCTTGTATTTTGTACCCTGGGTGGCTTGTCGTGACACGT GGCACCATGCATGTTTCAAAGAGGATGTTCAAGCCCAGTACCTAGGCCGA CCACAGCCGCGTTGAAAATCGTGTGTATGGCGAAAGGCGAGGGTGGTGCG AGGCCGCCGCGCAAAGGGCCCACGTATCGTGCCGGGTCGCAGGTTAGATG TGATGGCGTGCACAGCGCCTCACGTAAAGTACCTACTTCTGTGGGAGGAG GTCCTACCCGTTCAGGTAGCATCTGGGTCGCACTTAGAAGTGGGAAGAAT TGTTTCGCGGGTGTACGCACACCATATCTGGACGAACGTACGTACGACCG AGGTCTATGTCGCGTGGCATACTGTCTCCCCCCAGCTATGGCTGTTGATC AAGTCTCAGGGTACAGACGGGGCAACGTTGTTATCGGCAGCAGTCCGCAG CGGGAGCGTTAACATGTTTGAAGCCACGCTGGGCTATGCTTTGGAGTATC TCGGTCACCACGAGGTACGTGAGCATGTCCTATCGTCGTCTCGAATCCAT TTCACGTCTCGGTCGTCTGCAAAGATTGGTGTGTGGTGTTACGACGAGAT ACGCGTGTTGGCAATGCAAGTAGGACATAGCGGTACACATTCCTTGGACT GAAAGGCGTTGAAAACCGAAGGTAAAAACCTGGGCGAAGGGGATTGTGAC TGCCGTGTGTGATGTATTTGCACGCACCTTACACGAACACCGTACTGTCT GAACTGATATCGGACCCTGCCTTATCAATAAGCTCCTCTCCCGCTTGTTA TCCTCAGCTGTGTGTGCTCCTGGAACGCGTCATCAAGGATGGACGAACGC TGCTCTTCTCGGCACCGTACGCGTTCAGCCTCGCGCTGTGGTCAAAGTCT CTGGAACCCGGACATTTCGGATTTTTCGAATCAGTGACGAGAGTTGTCCC GTCAGTGCACCGCTATCAGGTGCTCACCTAGGATCTCAATATTATTCGGG GTTAATTCAACGCTGCCATACATATCGGTACACGGGGTGCGAGTAAAACA GCTTGAAGAATGACGTTGGGAGAGCCTTCACAGTACTTCCATACGAGTAA AGCAAAACTACTCCCCCTTTGATGTATTCAGAACCTTAAGATCATTGATC AATGTACCCAAGGTACGGCACGATCAAGGTCCAGCTCAATGGTAGAAAAT ATCTCCCTTTTCGAAATACACCTGCTATCCATCGATCGCTTCGCGTTTTG GAACACGCCAAGAAAGCAAGCATGTTCTCGGTTGAACGCTAATATAGCAT CAGTGAAGGCCACTAGCAGACGAACATCGCAGGCTCGCGGCGGTGATGGT TCTGTTAGATTGTAGACCGTGTGGCACTACGGATACACCCGTAGGTAAGG GGCATTTACGCACGTAATCTCTGCGTCCTAGAACCCTCAATGGCCACGAA CCCTGTGTGTGTCTGTCGTATCAGCTAGTAGGCACTACGAGTCCATTTTT GCGGCGGGCGCTTCAAGATCATGGGCTACTGCGCGTGTTGGACGCTCGAT ACATGGTGAAGTACCAGGCAATGGTCTAAGGAGCTGAAGTCGTCGTATGT AGGCGTTCATTCTACCTTAGAGTTGGTCTCACAATTTGGTTCAAACCCAA CTCTGAAACAGCGTGCGCAGTGTTTAGGCCTTGTTTCGATGAGGTTGGTG CATCTGTTACTGTCGGTCCAGAGCATGCACACACAATGTACTGCATGCCT CACGAATTTCGGTCACCCGGTTCTTTGGAATTGGATCCTGAAACCTTGTA CGCAAGCCTATCGAGATTACGGACGAAATTCAAGGATTTGTGTATCTTGG TCTTCACCATTCGGGGTCCGAGGGTCACCGAGGGTCGCATCGCAACGGCC TCCTGGCACCACTTACTACCCGCGACGGACACTTAATCATGGCCAGGAGA ACCCTCGCGCAAAGGGCTCAATCATGCTACGTTGTTTGAGGCCCCACAGT GCAAATTCGCAAGTCTAGTTTGTGTGATGAGCTTAAAACCTTCTGACGTT TTTCTCAAGGGATGTTGGCACATTCGAGGCCATTTTGCCTGTTATTCTGA CAGAATGACGGTCGTGCTCTTCCTAAAAGTACGAAACGGCCGGGCATATC CGATCGTCTGGTTTAATCCGAAATGAGCGTTATTCACAAATTGCCGCGTC CATTTCCTCGTTCTTTCGTTTACGTTTGCACGGCCCTCCCTTCTAAACAT CGCCAACATGCAGGTGGCTGACGAGCCGTGCTCCCGGTTGGACGCTCTGT TTGAGGCCTGTGTAGAGGACCTCCTCAATGCTCATCCCGAGGATGTTGAT TCAGGCTTCAAAACCCTATCATTTCTGATGGCGGGTTCTGCGAGACCATC CGCAAGCGATTTGAAAAAACTCTCCAAACACCACAAGTCTAGGGACGGAT TCAAGAACTGCTGCTTGCGGGCAGTGACAACCGCGGCCAACCCCTTCATG CCGGGCTTATTGCTTTCTATTAGGCTTGCCGAAGCTGCGAAAGAGGCGAA CGAGGGAGAACAAAGACACATGGACGAGATCCGGGCTAGCGTTGAGGCGC TATATTGCTCGAAATATTCGAGCGCCTACCTCGAACGGTCTGCGCGTTCG ACGAAGAGACGAAGGGTGGCTGCACCGGCATGTTCGAGCCGCAGATTTTG GGAGGCCACCAACCCCTAGGCTTCGAACGCCCTATCGACATGATTCTCTC GAAACAAGAGCAGATGAACACATTTTGCAACGTACCTCTGGTGATGGATT TCTTATCGCGAAGGTTTGCCTGGGGTCTACCGGACCTGCAGGATACCGAA GGGGTGTTGAGGAACTCGGAGGATTTGAAGTGTCTCGGTGCCGGCCTTGT TCTTGGTGATGGTGGAGAAGATGTCCTCAGCGGGTGTAAGAACTTCTTGG CCCGCTTGTCTGTACTGCTACAGGCAGCACAGGACGATCTCCCAAACCTA GCGTTTTTCCCAGGGGCACAGTTCGTTGTTGCTGGCGTGGCAGCGGATCC AAGCACCTACTATCGGGTTCCGGCCATGAGAATGTTGCTTGACTTCGTCG CATACGTCGCAATGATTGCAGCGTTGGGCTATCTCGTCTTCTTCCACAGC CCAACCGGAGGTGTACTTGGAGATGACGGTATCTCGGATGTAGAGTTTAC CTGGGGAGAAGGCTCCTTCGCGGCAATATTCATTTCGGTGAGTGCATGTA AATGCAGACACAACAGGCCCTACGGTAGAAAGCGCCCGCACTACTGCACG TAAGCCGTTTTGCGCAAAGCCTCATACCTGCGGACTAATGGATAGGTTTA TCACACGGGTATCACTGCTGTTGCATCAACAGCGGGTGATATATGATTTG CCTGGTACTTCGTATTCTATAGATATCAACATGGGGTCGGGTTCAAGTTT TTTTGTTTGACAACTCATGATCCTTAACTGCATCCATGCTCTGGAATCGG GCGTGTACTACTGTATCCTCAAGAAGAGCGCGACGTATCGATTCTCGTTG TGTCTTGTCGAACGCAATACAAATGTGACTTATCAAGTGTGCTCCCGGTT GAGGTCGCCACATGGCCAAGGAATGCTTGTGTCGACCACGGTTAGCGTTG GGACATCTTACCCCACGCGTTTCTGGCCTTCCTCGGTTACAGGACACATG CTTATGTGCTTGCTCACGCACGCTTTTCTGCCGACCGTGTTATGTTCGAT GTGTTGTTTGTTCAGGCTGGAGTATACCGTGAAGGGCTCGAAATATCGAT GGGCATCGACAAGGACTTCAAAGACCAGTGGAATATCCTGGACGGGCTCG CTGTCCTGTGTCTGTCCGTTGGGTTGATCATCAGAGGCGTCGATTGGACT AGTCCATGGGGGCCTGCATTCTACGCGCTGAGTGCTCCGCTATTTGTTTG TCGTGTTCTCTTCTTTGCCCAGGTTCTTCCTTTTCAGGGCCCCATGATCA AGGAAAATAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig90:143233..148492+

>mRNA_Ecto-sp6_S_contig90.18325.1 ID=mRNA_Ecto-sp6_S_contig90.18325.1|Name=mRNA_Ecto-sp6_S_contig90.18325.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=834bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:143233..148492+ (Ectocarpus species6 EcLAC_371)
ATGCTGACGGCGACAGATCAACTTGGACACACGATACTTACGGCGGCAGT
GTCGAGCAAGAGCGTGGGCACTTTCGAGGCTGTCTTCAATGCAGCCAAGA
GGTACTTCCACCGTGGGCAGTTTGCTAAAATGCTATCGGCGAAAGACCAA
CTCGGACACACGATACTTACGGCGACAGTTTCGAGCCACAGCGAAGACAC
TTGCAAGACTGTCTTCAATGTAGCCAAGGAGTACCTCAACCAAGAGCAGC
TATGGCTGTTGATCAAGTCTCAGGGTACAGACGGGGCAACGTTGTTATCG
GCAGCAGTCCGCAGCGGGAGCGTTAACATGTTTGAAGCCACGCTGGGCTA
TGCTTTGGAGTATCTCGGTCACCACGAGGTGGCTGACGAGCCGTGCTCCC
GGTTGGACGCTCTGTTTGAGGCCTGTGTAGAGGACCTCCTCAATGCTCAT
CCCGAGGATGTTGATTCAGGCTTCAAAACCCTATCATTTCTGATGGCGGG
TTCTGCGAGACCATCCGCAAGCGATTTGAAAAAACTCTCCAAACACCACA
AGTCTAGGGACGGATTCAAGAACTGCTGCTTGCGGGCAGTGACAACCGCG
GCCAACCCCTTCATGCCGGGCTTATTGCTTTCTATTAGGCTTGCCGAAGC
TGCGAAAGAGGCGAACGAGGGAGAACAAAGACACATGGACGAGATCCGGG
CTAGCGTTGAGGCGCTATATTGCTCGAAATATTCGAGCGCCTACCTCGAA
CGGTCTGCGCGTTCGACGAAGAGACGAAGGGTGGCTGCACCGGCATGTTC
GAGCCGCAGATTTTGGGAGGCCACCAACCCCTAG
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