mRNA_Ecto-sp6_S_contig9.18291.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: D7FVA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA6_ECTSI) HSP 1 Score: 376 bits (966), Expect = 1.460e-125 Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 3
Query: 87 MLSTRGQGFTASHVVRSGHKATPRSMTRPVMAQQQQQSSALELVDDAAILPGIAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 665
MLSTRGQGFTASHVVRSGHKATPRS+TRPVMAQQQQQSSALELVDDAAILPGIAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI
Sbjct: 1 MLSTRGQGFTASHVVRSGHKATPRSVTRPVMAQQQQQSSALELVDDAAILPGIAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 193
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: A0A250X8I3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X8I3_9CHLO) HSP 1 Score: 170 bits (431), Expect = 1.110e-45 Identity = 84/141 (59.57%), Postives = 104/141 (73.76%), Query Frame = 3
Query: 249 ASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI*E 671
A F D RPV+LYDGVCN+CNG VNL LD+D +FR +ALQS GR LL GR PDDISSIV+VE+ G HI+SDA+LR+ + L P L L GV VP F+R+ +YD VADNRYS++GKRDVCR D+R+++RFI E
Sbjct: 82 ADDFANDRRPVILYDGVCNLCNGAVNLMLDLDPRGEFRMAALQSPAGRRLLQTCGRQPDDISSIVVVERGGKHHIKSDAILRIAQGLSNPFPLFALFGVPVPPFLRDSLYDLVADNRYSILGKRDVCRLKDDRFSERFIAE 222
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: A0A836CH16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH16_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.940e-44 Identity = 79/142 (55.63%), Postives = 106/142 (74.65%), Query Frame = 3
Query: 243 IAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEK-FRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 665
+ VF D RPV+L+DGVCN CN +VN L +D D K RF+ LQ G+ALL +GR+ DDISSIVLV++ G+ +I+SDA+LR+ + LGGP ++ PG L+P+F R+ +YD VA+NRYS+MGKR+ CRCSD +YADRFI
Sbjct: 6 VTREVFSSDKRPVVLFDGVCNFCNTWVNAALQLDPDGKALRFTPLQGDVGKALLQQAGRAADDISSIVLVDEQGS-YIKSDAILRISKALGGPAPVLAAPGFLMPQFARDTLYDLVANNRYSLMGKRETCRCSDPKYADRFI 146
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: A0A7S2B0P4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0P4_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.570e-39 Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 3
Query: 219 DDAAILPGIAASVF-EKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 665
+D A ++F EKD+RPV+L+DGVCNMCNG VN LD D D FRF+ALQS TGRALL +GR PDDISSIVLV+ S AA+I+SDA+LR+ R L P + G+ PK R+ YD +A NRY V G+ CR SD+R+ RFI
Sbjct: 65 EDTVAWQSRADAIFSEKDSRPVILFDGVCNMCNGGVNFALDWDPDGNFRFAALQSPTGRALLRRAGREPDDISSIVLVDDS-AAYIKSDAILRIARKLNLPFPFLGSAGLFFPKLPRDVFYDVIAQNRYRVFGRSQSCRLSDDRFEARFI 213
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: A0A176VXX5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VXX5_MARPO) HSP 1 Score: 153 bits (387), Expect = 6.350e-39 Identity = 78/136 (57.35%), Postives = 98/136 (72.06%), Query Frame = 3
Query: 258 FEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 665
F D RP++L+DGVCNMCNG VN LD D + K RF+ALQS+ GRALLA SGRSPDDISS+VLV+Q A+I+SDA+L R L P V + +VP F+R+ +YD VADNRYSV G+ CR SD R+ +RF+
Sbjct: 126 FATDTRPIILFDGVCNMCNGAVNFMLDNDAEGKVRFAALQSEAGRALLARSGRSPDDISSVVLVDQE-RAYIKSDAILNTLRYLQFPFPPVAMAASIVPLFLRDVVYDQVADNRYSVFGRTIACRLSDSRFEERFL 260
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: A0A383WGK0_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WGK0_TETOB) HSP 1 Score: 150 bits (379), Expect = 3.150e-38 Identity = 79/140 (56.43%), Postives = 100/140 (71.43%), Query Frame = 3
Query: 246 AASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 665
A F D RPV+L+DGVCNMCNG VN LD D + +RF+ALQS GR LL GR+PDDISSIVLVE+S +I+S+A+LR+ LG P+ L+ +LVPKFV + +YD VA+NRYS GK D CR SD+ +ADRF+
Sbjct: 86 AVDYFAIDKRPVVLFDGVCNMCNGGVNFMLDWDKEGVYRFAALQSTPGRQLLTRCGRAPDDISSIVLVEES-RCYIKSEAVLRIALRLGMPLPLLAGLALLVPKFVGDPVYDQVANNRYSFFGKSDSCRVSDDGFADRFL 224
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: A0A7J7QEF6_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEF6_9CHLO) HSP 1 Score: 148 bits (373), Expect = 1.920e-37 Identity = 82/156 (52.56%), Postives = 104/156 (66.67%), Query Frame = 3
Query: 198 SSALELVDDAAILPGIAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 665
SSA + AA A F D RPV+L+DGVCNMCNG VN LD D + +RF+ALQS G+ LL GR+PDDISSIVLVEQ I+S+A+LR+ LG P+ L+ +LVPKF+ + +YD VA+NRYSV GK + CR SD +ADRF+
Sbjct: 65 SSAPQAAAAAAPAAMQAVDYFATDTRPVVLFDGVCNMCNGGVNFMLDWDKEGVYRFAALQSTPGQQLLTRCGRAPDDISSIVLVEQDRCC-IKSEAVLRIATRLGMPLPLLAGLALLVPKFISDPVYDQVANNRYSVFGKSNSCRVSDAGFADRFL 219
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: L1K1V9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K1V9_GUITC) HSP 1 Score: 145 bits (365), Expect = 3.900e-37 Identity = 78/147 (53.06%), Postives = 99/147 (67.35%), Query Frame = 3
Query: 243 IAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEK----FRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVL--LPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 665
I VFEKD+RPV+LYDGVCN+CNG VN LD D + FRF+ALQS+ GRALL GR PDDISSIVL + G +++S+A+LR+G++ PV PG P+ VR+ YD VADNRY+ G D CR SDER+ +RF+
Sbjct: 9 IVRKVFEKDSRPVILYDGVCNLCNGGVNFMLDWDNPTQLRGNFRFAALQSEVGRALLQRGGRRPDDISSIVLACEDGKTYVKSEAILRIGKVCNQPVRFPSDSFPGPW-PRNVRDVFYDFVADNRYNFFGISDECRLSDERFDNRFV 154
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: A0A7S0AWY2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AWY2_9STRA) HSP 1 Score: 146 bits (369), Expect = 5.580e-37 Identity = 99/219 (45.21%), Postives = 124/219 (56.62%), Query Frame = 3
Query: 33 RHAFYGTAVVALWLVAIAMLSTRGQGFTASHVVRSGHKATPRSMTRPVMAQQQQQSSALELVDDAAILPGIAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGG---PVGLVLLPG----VLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDER-YADRFI 665
RHA VVA+ +S R FT+ HV A S+ + +S +V + +I + + VF D RPV+L+DGVCNMCNG VNL LD D D K RFSALQS GRALL +GR DDISSIVLV GA I+SDA+LR+ L P+ L LVPKF+R+ +YD VADNRYS++G RD CR DE + RF+
Sbjct: 3 RHALILAMVVAV-------VSQRVSAFTSRHV----RPAISSSLFSSISTTTTATTSPFPIVAEPSI---VLSRVFATDKRPVILFDGVCNMCNGAVNLALDYDPDAKLRFSALQSNVGRALLQTNGRDADDISSIVLVTSDGA-FIKSDAILRITEELTPSWLPLPLAKPAARAGRALVPKFLRDLIYDGVADNRYSILGMRDECRFGDENEFTARFV 206
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Match: A0A7S2UZ94_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ94_9STRA) HSP 1 Score: 146 bits (369), Expect = 8.300e-37 Identity = 77/146 (52.74%), Postives = 106/146 (72.60%), Query Frame = 3
Query: 246 AASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVE-----QSG-AAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 665
A +VFE D+RPV+L+DGVCNMCNG VNL LD D KFR++ALQS+TG+ALL +GR+PDDIS+IVLVE Q G A+I+++A+ R+ L P+ L+ VP+ V + YD +A NRY ++G++DVCR SD+R+ DRF+
Sbjct: 81 AEAVFETDSRPVILFDGVCNMCNGGVNLALDWDKVGKFRYAALQSETGKALLVKAGRAPDDISTIVLVEGPAGKQEGWRAYIKAEAVRRISAGLRAPLPLIAFAVRPVPRPVLDVAYDFIAANRYRILGRKDVCRLSDDRFEDRFL 226 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18291.1 >prot_Ecto-sp6_S_contig9.18291.1 ID=prot_Ecto-sp6_S_contig9.18291.1|Name=mRNA_Ecto-sp6_S_contig9.18291.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=218bp MQSGVIRHAFYGTAVVALWLVAIAMLSTRGQGFTASHVVRSGHKATPRSMback to top mRNA from alignment at Ecto-sp6_S_contig9:2719170..2722495- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18291.1 ID=mRNA_Ecto-sp6_S_contig9.18291.1|Name=mRNA_Ecto-sp6_S_contig9.18291.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3326bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2719170..2722495- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:2719170..2722495- >mRNA_Ecto-sp6_S_contig9.18291.1 ID=mRNA_Ecto-sp6_S_contig9.18291.1|Name=mRNA_Ecto-sp6_S_contig9.18291.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=654bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2719170..2722495- (Ectocarpus species6 EcLAC_371)back to top |