prot_Ecto-sp6_S_contig9.18250.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18250.1
Unique Nameprot_Ecto-sp6_S_contig9.18250.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length403
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: D7FVE0_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE0_ECTSI)

HSP 1 Score: 623 bits (1607), Expect = 9.500e-223
Identity = 368/393 (93.64%), Postives = 369/393 (93.89%), Query Frame = 0
Query:   10 MGPIAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVAKLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNIEDDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAGALXXXAGGAVRSNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSTNTTPVKPAAXXXXXXXXXXXXXXXXXXXXXXXKVDAASKKSEAEEREKGRDPTLSGESVTSAGRGENGAQEALAGKGGAKGGAAAGSSTQASSSIR 402
            MGPIAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVA LSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNI DDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGA   XXX    VR NDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSTNTTPVKPAA        XXXXXXXXXXXXXXX VDAA+KK    EREKGRDPT SGESVTSAGRGENGAQEALAGKGGAKGGAAAGSSTQASSSIR
Sbjct:    1 MGPIAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNI-DDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAXXXXXXXXXXVRGNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSTNTTPVKPAAAVKLPENNXXXXXXXXXXXXXXXXVDAAAKKXXXXEREKGRDPTSSGESVTSAGRGENGAQEALAGKGGAKGGAAAGSSTQASSSIR 392          
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: A0A6H5JIA4_9PHAE (PHD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA4_9PHAE)

HSP 1 Score: 573 bits (1476), Expect = 7.920e-203
Identity = 310/315 (98.41%), Postives = 312/315 (99.05%), Query Frame = 0
Query:    1 MVKAGKRSSMGPIAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVAKLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNIEDDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAGALXXXAGGAVRSNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSTNTTPVKPAA 315
            MVKAGKRSS+GPIAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVA LSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSR+KRRKVDESVSEKVSITKRMYGALDTCIKNI DDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAGALXXXAGGAVRSNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATS NTTPVKPAA
Sbjct:    1 MVKAGKRSSVGPIAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSRQKRRKVDESVSEKVSITKRMYGALDTCIKNI-DDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAGALXXXAGGAVRSNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSANTTPVKPAA 314          
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: A0A0A9NUC7_ARUDO (PHD-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NUC7_ARUDO)

HSP 1 Score: 86.7 bits (213), Expect = 1.750e-17
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0
Query:  221 AGGAVRSNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGC 286
            AG ++  +  +  NEP YC+C QV +GDMI CDNE+CE GEWFHY CVGL   + +  G W CP C
Sbjct:   15 AGTSMDVDPTIDPNEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGL-TPETRFKGKWFCPTC 79          
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: A0A484LD43_9ASTE (PHD-type domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LD43_9ASTE)

HSP 1 Score: 84.3 bits (207), Expect = 2.140e-16
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0
Query:  231 LSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGC 286
            +  NEP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL   + +  G W CP C
Sbjct:   48 IDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACVGL-TPETRFKGKWYCPTC 102          
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: A0A2P2J926_RHIMU (PHD finger protein ING n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J926_RHIMU)

HSP 1 Score: 84.7 bits (208), Expect = 2.340e-16
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0
Query:  231 LSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGC 286
            +  NEP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL   + +  G W CP C
Sbjct:   58 IDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGL-TPETRFKGKWYCPTC 112          
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: I1GNB5_BRADI (PHD finger protein ING n=4 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GNB5_BRADI)

HSP 1 Score: 88.2 bits (217), Expect = 2.830e-16
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:  227 SNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGC 286
            ++ ++  NEP YCVC QV +GDMI CDNE+CE GEWFHY CVGL   + +  G W CP C
Sbjct:  191 ADQMIDPNEPTYCVCHQVSYGDMIACDNENCEGGEWFHYSCVGL-TPETRFKGKWFCPTC 249          
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: A0A0K9QU31_SPIOL (PHD finger protein ING n=4 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9QU31_SPIOL)

HSP 1 Score: 88.2 bits (217), Expect = 3.260e-16
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 0
Query:  225 VRSNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARA 292
            V ++  +  NEP+YCVC QV +GDMI CDNE+C+ GEWFHY CVGL   + +  G W CP CS   R+
Sbjct:  195 VDTDQPIDPNEPIYCVCHQVSFGDMIACDNENCQGGEWFHYACVGL-TPETRFKGKWYCPTCSPQFRS 261          
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: UPI000233BD5F (PHD finger protein ING2 n=1 Tax=Glycine max TaxID=3847 RepID=UPI000233BD5F)

HSP 1 Score: 85.1 bits (209), Expect = 5.540e-16
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0
Query:  231 LSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGC 286
            +  NEP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL   + +  G W CP C
Sbjct:  103 IDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQ-ETRFKGKWYCPTC 157          
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: A0A3B6LTG6_WHEAT (PHD finger protein ING n=16 Tax=Triticeae TaxID=147389 RepID=A0A3B6LTG6_WHEAT)

HSP 1 Score: 87.4 bits (215), Expect = 5.780e-16
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 0
Query:  228 NDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGC 286
            + ++  NEP YC+C QV +GDMI CDNE+CE GEWFHY CVGL   + +  G W CP C
Sbjct:  197 DQMIDPNEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGL-TPETRFKGKWFCPTC 254          
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Match: A0A8J4Q3R0_9ROSI (PHD-type domain-containing protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4Q3R0_9ROSI)

HSP 1 Score: 84.7 bits (208), Expect = 6.110e-16
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0
Query:  231 LSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGC 286
            +  NEP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL   + +  G W CP C
Sbjct:   95 IDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGL-TPETRFKGKWYCPTC 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVE0_ECTSI9.500e-22393.64PHD finger protein-related n=1 Tax=Ectocarpus sili... [more]
A0A6H5JIA4_9PHAE7.920e-20398.41PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A0A9NUC7_ARUDO1.750e-1753.03PHD-type domain-containing protein n=1 Tax=Arundo ... [more]
A0A484LD43_9ASTE2.140e-1658.93PHD-type domain-containing protein n=1 Tax=Cuscuta... [more]
A0A2P2J926_RHIMU2.340e-1658.93PHD finger protein ING n=1 Tax=Rhizophora mucronat... [more]
I1GNB5_BRADI2.830e-1656.67PHD finger protein ING n=4 Tax=Brachypodium distac... [more]
A0A0K9QU31_SPIOL3.260e-1652.94PHD finger protein ING n=4 Tax=Chenopodiaceae TaxI... [more]
UPI000233BD5F5.540e-1658.93PHD finger protein ING2 n=1 Tax=Glycine max TaxID=... [more]
A0A3B6LTG6_WHEAT5.780e-1655.93PHD finger protein ING n=16 Tax=Triticeae TaxID=14... [more]
A0A8J4Q3R0_9ROSI6.110e-1658.93PHD-type domain-containing protein n=1 Tax=Castane... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79
NoneNo IPR availablePANTHERPTHR10333:SF42INHIBITOR OF GROWTH PROTEINcoord: 37..294
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 238..287
e-value: 1.1E-7
score: 41.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 234..303
e-value: 3.9E-20
score: 73.5
IPR028651ING familyPANTHERPTHR10333INHIBITOR OF GROWTH PROTEINcoord: 37..294
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 230..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2285636..2290366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18250.1mRNA_Ecto-sp6_S_contig9.18250.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2285592..2290735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18250.1 ID=prot_Ecto-sp6_S_contig9.18250.1|Name=mRNA_Ecto-sp6_S_contig9.18250.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=403bp
MVKAGKRSSMGPIAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPT
ELKDDLKKVAKLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNL
IDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNIEDDEIDKLE
KDVKESYGAMPDIPSLAPEMFAEHKKTAAAAAAVLAAAGGLAGPQTRAGV
AAYPAAALAGGVGAGALGAAAGGAVRSNDLLSTNEPVYCVCRQVGWGDMI
GCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLE
RRATSTNTTPVKPAAAVKLPENDDDDNEDEEDEDEGESKVDAASKKSEAE
EREKGRDPTLSGESVTSAGRGENGAQEALAGKGGAKGGAAAGSSTQASSS
IR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR028651ING_fam
IPR011011Znf_FYVE_PHD