prot_Ecto-sp6_S_contig9.18132.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig9.18132.1
Unique Name	prot_Ecto-sp6_S_contig9.18132.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	465

Homology

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BLAST of mRNA_Ecto-sp6_S_contig9.18132.1 vs. uniprot
Match: A0A6H5JFK6_9PHAE (START domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFK6_9PHAE)

HSP 1 Score: 877 bits (2266), Expect = 0.000e+0
Identity = 452/465 (97.20%), Postives = 454/465 (97.63%), Query Frame = 0

Query:    1 MFHLPYPTGLTISTESGNPRQANRNRLNSAPVMATAATSTPGVTXXXXXXXXXXXXHAMSAEAAPSQEEVENGKQDPGLKFLRDIHLTPEEDARYASLARGWIPDLVGFEASDEGWKLSSTLFGVKVWSRPNPDDSDSSLVICRGQIPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVPDMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNIICTNQAMNVSRVKNKLHETAKALAALKIGAPIFPKAIGWRQTHEFPLRRPAPGSAASTVSVKFSATSKVTFRVVGATAATADWAPAEASTGVGAGETVTYPADTPTTMTFKLRPEAAGGNGAR-GGGAVGASDVELEEAKSSVVLEWKGAGWFGGLVIYHLVEVA 464
            MFHLPYPTGLTISTESGNPRQANRNRLNSAPVMA AAT+TPGVT   XXXXXXX  HAMSAEAAPSQEEVENGKQDPGLKFLR+I LTPEEDARYASLARGWIPDLVGFEASDEGWKLSSTLFGVKVWSRPNPDDSDSSLVICRGQIPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVPDMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNIICTNQAMNVSRVKNKLHETAKALAALKI APIFPKAIGWRQTHEFPLRRPAPGSAASTVSVKFSATSKVTFRVVGATAAT DWAPAEASTGVGAGETVTYPADTPTTMTFKLRPEAA GNGAR GGGAVGASDVELEEAKSSVVLEWKGAGWFGGLVIYHLVEVA
Sbjct:    1 MFHLPYPTGLTISTESGNPRQANRNRLNSAPVMAAAATTTPGVTATTXXXXXXXSSHAMSAEAAPSQEEVENGKQDPGLKFLREIQLTPEEDARYASLARGWIPDLVGFEASDEGWKLSSTLFGVKVWSRPNPDDSDSSLVICRGQIPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVPDMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNIICTNQAMNVSRVKNKLHETAKALAALKIEAPIFPKAIGWRQTHEFPLRRPAPGSAASTVSVKFSATSKVTFRVVGATAATTDWAPAEASTGVGAGETVTYPADTPTTMTFKLRPEAASGNGARRGGGAVGASDVELEEAKSSVVLEWKGAGWFGGLVIYHLVEVA 465

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BLAST of mRNA_Ecto-sp6_S_contig9.18132.1 vs. uniprot
Match: L8H5Y9_ACACA (START domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5Y9_ACACA)

HSP 1 Score: 66.6 bits (161), Expect = 2.650e-8
Identity = 65/241 (26.97%), Postives = 106/241 (43.98%), Query Frame = 0

Query:   87 LTPEEDA--RYASLARGWIPDLVGFEASDEGWKLSSTLFGVKVWSRPNPDDSDSSLVIC---RGQIPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVPDMEKLCKRIRSTVKTSGLVFREPKDGGPMRA------TYVVNVNPNGWIPSKIVNIICTNQAMNVSRVKNKL 316
            L+PE+     Y  +       ++    +DEGW       G+ + S+ +PDD     V C   +G IP T     E+++   V V           +  D M       Y+I  E    +R+    F A     +RDF  +     + +  T + LF  V  SIER ++P  E     +R  +K+SG V + P D  P+        TY+V +NP GWIP+ +VN +  +Q + ++ +KN +
Sbjct:   39 LSPEDSLYKEYLDITEAGYESILKDYDADEGWVFWKEQDGITIHSKDHPDDP----VRCFRGKGIIPATA----EVLRLHLVQV--------DLRKYWDDMFLGGT--YKI--ELTPTVRVCNYKFSAPWPVASRDFVII-----AGEKITDDGLFVTVVNSIERDDIPVEEGF---VRGMLKSSGFVIK-PLDNDPVTGKPRCEITYLVQLNPMGWIPTIVVNTVNVSQPLCINTLKNAI 250

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BLAST of mRNA_Ecto-sp6_S_contig9.18132.1 vs. uniprot
Match: A0A7S1IDR3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IDR3_9EUGL)

HSP 1 Score: 60.5 bits (145), Expect = 8.640e-7
Identity = 62/232 (26.72%), Postives = 100/232 (43.10%), Query Frame = 0

Query:   87 LTPEEDARYASLARGWIPDLVGFEASDEGWKL----SSTLFGVKVWSRPNPDDSDSSLVICRGQIPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVP-DMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNIICTNQAMNVSRVK 313
            L  EED +  +   G+I  L    ASD  WK+    SST F V  W      D D  +++ +G +P+       +   + VD     +   + M+  D M +  +I+     +      +    FK     W RDF + +      D   G  L C    S+E P++P +       +R  +  SG  +  P + G    +Y+V  +P G IP+  VN++ T+QA NV R+K
Sbjct:   17 LLTEEDQQNIN---GFISTL---NASD--WKVDSQDSSTGFMVS-WKH----DPDYPVILVKGVVPVN------VPTKKVVDFMANDDCFEKFMKTCDTMCKSCQIIEVKDSKH----TVKHAKFKLPTPLWDRDFVWAELCTMLPD---GSGLSC--GCSVEHPKMPPESGGFFNAVRGEISCSGY-YVSPNEDGTCTVSYLVQCDPKGLIPAAAVNLLATDQAKNVLRLK 219

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig9.18132.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig9.18132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JFK6_9PHAE	0.000e+0	97.20	START domain-containing protein n=2 Tax=Ectocarpus...	[more]
L8H5Y9_ACACA	2.650e-8	26.97	START domain containing protein n=1 Tax=Acanthamoe...	[more]
A0A7S1IDR3_9EUGL	8.640e-7	26.72	Hypothetical protein n=1 Tax=Eutreptiella gymnasti...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002913	START domain	PFAM	PF01852	START	coord: 198..311 e-value: 2.3E-6 score: 27.2
IPR002913	START domain	PROSITE	PS50848	START	coord: 111..325 score: 15.219
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 115..323 e-value: 8.5E-23 score: 83.1
None	No IPR available	PANTHER	PTHR19308	PHOSPHATIDYLCHOLINE TRANSFER PROTEIN	coord: 34..320
None	No IPR available	PANTHER	PTHR19308:SF14		coord: 34..320
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 110..316

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig9	contig	Ecto-sp6_S_contig9:1230374..1236429 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig9.18132.1	mRNA_Ecto-sp6_S_contig9.18132.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig9 1230278..1236429 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18132.1 ID=prot_Ecto-sp6_S_contig9.18132.1|Name=mRNA_Ecto-sp6_S_contig9.18132.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=465bp
MFHLPYPTGLTISTESGNPRQANRNRLNSAPVMATAATSTPGVTATTRTP
SVVASSHAMSAEAAPSQEEVENGKQDPGLKFLRDIHLTPEEDARYASLAR
GWIPDLVGFEASDEGWKLSSTLFGVKVWSRPNPDDSDSSLVICRGQIPLT
QDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELI
RISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVP
DMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNI
ICTNQAMNVSRVKNKLHETAKALAALKIGAPIFPKAIGWRQTHEFPLRRP
APGSAASTVSVKFSATSKVTFRVVGATAATADWAPAEASTGVGAGETVTY
PADTPTTMTFKLRPEAAGGNGARGGGAVGASDVELEEAKSSVVLEWKGAG
WFGGLVIYHLVEVA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002913	START_lipid-bd_dom
IPR023393	START-like_dom_sf