prot_Ecto-sp6_S_contig9.18126.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18126.1
Unique Nameprot_Ecto-sp6_S_contig9.18126.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length170
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE)

HSP 1 Score: 325 bits (834), Expect = 4.290e-100
Identity = 166/170 (97.65%), Postives = 167/170 (98.24%), Query Frame = 0
Query:    1 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLMSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAKMTGTSSGARQAQRLRSICRAFFDECRLAEADAERGHD 170
            LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPL S TTPDERYQAGLDRHMANLGEVLQGQ FAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAK+TGTSSGARQAQRLRSICRAFFDECRLAEADAERGHD
Sbjct: 8233 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSSTTPDERYQAGLDRHMANLGEVLQGQNFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAKITGTSSGARQAQRLRSICRAFFDECRLAEADAERGHD 8402          
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: D8LLX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX1_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 5.500e-75
Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0
Query:    1 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLMSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQA 127
            LVSTVAAFNVIHVSCH EAARADRAMRVPKSEWEGATLRNSRVACNSLLPL SPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQ+IPYQLQA
Sbjct:  458 LVSTVAAFNVIHVSCHQEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQVIPYQLQA 584          
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: A0A835Z9Y3_9STRA (E3 ubiquitin-protein ligase UBR4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.170e-35
Identity = 79/182 (43.41%), Postives = 115/182 (63.19%), Query Frame = 0
Query:    1 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLMSPT----------TPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAKMTGTSSGAR----QAQRLRSICRAFFDECRLAEADAERG 168
            L++TV A N IH+SCH EA R+DR +R PK+EWEGA LRNSRV CNS+LP+  P             ++ +  G+D H ++L EV  G++ + RL L++ D+RLLLL+L++QE++ +  GGG+  SN+ L+ +QLQ AAHLA  T + S A     QA   +S+  AF +  ++A   A  G
Sbjct: 6166 LIATVTALNAIHLSCHREAVRSDRGLRNPKTEWEGAALRNSRVLCNSILPIKPPAPASATAAPARNAEDSWSKGVDLHFSHLREV--GKSESSRLALVLHDIRLLLLQLSYQETMRSASGGGSVSSNMTLLWHQLQLAAHLAGATTSPSTASPDPSQANHYKSLLAAFIESAKVAREVAAAG 6345          
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: A0A7S2FLX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLX3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.410e-34
Identity = 71/155 (45.81%), Postives = 94/155 (60.65%), Query Frame = 0
Query:    1 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLMSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAKMTGTSSGARQAQRLRSICRAFF 155
            L +TV+A N+IH+SCH  AARADRA+  PK+EWEGATLRNSRVACNS+LPL  P  P E Y   L+RH   +G      A   R   +  D+RLL LR+ +QE L  D GGG+  SN++L+  QLQ   ++ +        R+  R R+   +F 
Sbjct:   32 LHTTVSACNLIHLSCHDSAARADRALSRPKNEWEGATLRNSRVACNSILPLHGPDIPAEVYHKALERHFGCVGAF--ACAALSRFGQVAHDMRLLCLRICYQEPLRDDAGGGSLTSNMKLLALQLQLGVYILEHAAVFDDPREHSRYRTTLESFL 184          
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: A0A7S2G4M4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4M4_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.950e-34
Identity = 65/131 (49.62%), Postives = 90/131 (68.70%), Query Frame = 0
Query:    1 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLMSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHL 131
            LV++V+AFN IH+SCH +AA+ADR +  PKSE+EGATLRNSR  CNSLLP+  P    + +   ++RH  N+G        A +  LL+ D+RLL LR+AHQE+L  + GGG+  SN++L+ YQLQ   +L
Sbjct:   78 LVTSVSAFNTIHLSCHDQAAKADRNLSKPKSEFEGATLRNSRCKCNSLLPINGPEVSSDAFALAIERHFGNVG------GDASKFRLLLHDMRLLALRIAHQENLRDEVGGGSLSSNVKLLTYQLQLGLYL 202          
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: I2CNY7_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CNY7_NANGC)

HSP 1 Score: 136 bits (342), Expect = 5.750e-34
Identity = 69/136 (50.74%), Postives = 94/136 (69.12%), Query Frame = 0
Query:    1 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLMSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAKMTG 136
            LV+TV+AFN+IH+SCH EAARADR ++ PK EWEGA+LRNSRV+ N LLP+  P T  + +   +D+H A L +     A   RL L+  DVR LLLR+++ +SL  D GGG+  SN++L+PYQL  A +L +  G
Sbjct:  377 LVTTVSAFNLIHLSCHAEAARADRVLKQPKGEWEGASLRNSRVSANGLLPIRGPQTSPDAFSQAVDKHFARL-KAFHQHAPVSRLGLVAHDVRFLLLRVSYGDSLRKDSGGGSLSSNLKLVPYQLAMAEYLKREEG 511          
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: W7U2B9_9STRA (Zinc finger, ZZ-type n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2B9_9STRA)

HSP 1 Score: 136 bits (342), Expect = 6.500e-34
Identity = 69/136 (50.74%), Postives = 94/136 (69.12%), Query Frame = 0
Query:    1 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLMSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAKMTG 136
            LV+TV+AFN+IH+SCH EAARADR ++ PK EWEGA+LRNSRV+ N LLP+  P T  + +   +D+H A L +     A   RL L+  DVR LLLR+++ +SL  D GGG+  SN++L+PYQL  A +L +  G
Sbjct: 4536 LVTTVSAFNLIHLSCHAEAARADRVLKQPKGEWEGASLRNSRVSANGLLPIRGPQTSPDAFSQAVDKHFARL-KAFHQHAPVSRLGLVAHDVRFLLLRVSYGDSLRKDSGGGSLSSNLKLVPYQLAMAEYLKREEG 4670          
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: A0A4D9DHT1_9STRA (ZZ-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHT1_9STRA)

HSP 1 Score: 135 bits (341), Expect = 8.870e-34
Identity = 69/133 (51.88%), Postives = 92/133 (69.17%), Query Frame = 0
Query:    1 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLMSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAK 133
            LV+TV+AFN+IH+SCH EAARADR ++ PK EWEGA+LRNSRV  N LLP+  P T  + +   +D+H A L +     A   RL L+  DVR LLLR+++ +SL  D GGG+  SN++L+PYQL  A +L K
Sbjct: 4741 LVTTVSAFNLIHLSCHAEAARADRVLKQPKGEWEGASLRNSRVRANGLLPIRGPHTSPDAFSQAVDKHFARL-KAFHQHASVSRLGLVAHDVRFLLLRVSYGDSLRKDSGGGSLSSNLKLVPYQLAMAEYLKK 4872          
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: A0A7S3JQW5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQW5_9STRA)

HSP 1 Score: 125 bits (313), Expect = 5.130e-30
Identity = 75/177 (42.37%), Postives = 104/177 (58.76%), Query Frame = 0
Query:    1 LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLM-------SPTTPDERYQAGLDRHMANLGEV--------LQGQAFAP-RLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAKMTGTSSGARQAQRLRSICRAFFDECRLA 161
            +VS+V+A+N+IH SCH EA RA+R +R P+SEW+GATLRNSRV CNS +PL          T     Y + LDRH A++ ++            + AP R  +++ D RLLLLRLAH+E L ++ GGG+  SNI L+ Y LQ A HL  ++   + +     LR I  AF  +   A
Sbjct: 4141 VVSSVSAWNLIHSSCHREATRAERNLRSPRSEWDGATLRNSRVLCNSFIPLRPSAAIGSDATAATTAYNSALDRHFASMSQLGVSARSSSSSSSSEAPTRFTVVLHDARLLLLRLAHREQLHSESGGGSRASNIMLLCYLLQLATHLL-VSNKPADSPDRDHLRRIVDAFASQASSA 4316          
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Match: A0A7I8KJB3_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KJB3_SPIIN)

HSP 1 Score: 124 bits (312), Expect = 7.000e-30
Identity = 67/138 (48.55%), Postives = 87/138 (63.04%), Query Frame = 0
Query:    3 STVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLMSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQAAAHLAKMTGTSSG 140
            +TV+ FNVIH  CHHEA RAD A++ PK EWEGA LRN+   CNS+ PL  P+ P  +Y   +D+H  NL  +  G+A   RL LL  D+ L+L R A   S SAD  GG   SN + +P+ +Q AAHL +  G+SSG
Sbjct: 4741 TTVSHFNVIHFQCHHEAKRADAALKNPKKEWEGAALRNNETLCNSVFPLRGPSVPLPQYLRYVDQHWENLAAL--GRADGSRLRLLTYDIVLMLARFATGASFSADSRGGGKESNARFLPFMVQMAAHLLEQ-GSSSG 4875          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J981_9PHAE4.290e-10097.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLX1_ECTSI5.500e-7597.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z9Y3_9STRA1.170e-3543.41E3 ubiquitin-protein ligase UBR4-domain-containing... [more]
A0A7S2FLX3_9STRA1.410e-3445.81Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2G4M4_9STRA2.950e-3449.62Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
I2CNY7_NANGC5.750e-3450.74Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
W7U2B9_9STRA6.500e-3450.74Zinc finger, ZZ-type n=1 Tax=Nannochloropsis gadit... [more]
A0A4D9DHT1_9STRA8.870e-3451.88ZZ-type domain-containing protein n=1 Tax=Nannochl... [more]
A0A7S3JQW5_9STRA5.130e-3042.37Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7I8KJB3_SPIIN7.000e-3048.55Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025704E3 ubiquitin ligase, UBR4PFAMPF13764E3_UbLigase_R4coord: 2..150
e-value: 1.1E-44
score: 152.8
NoneNo IPR availablePANTHERPTHR21725PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600coord: 2..143
NoneNo IPR availablePANTHERPTHR21725:SF1E3 UBIQUITIN-PROTEIN LIGASE UBR4coord: 2..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1165704..1167391 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18126.1mRNA_Ecto-sp6_S_contig9.18126.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1165702..1167391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18126.1 ID=prot_Ecto-sp6_S_contig9.18126.1|Name=mRNA_Ecto-sp6_S_contig9.18126.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=170bp
LVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLP
LMSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLA
HQESLSADCGGGAARSNIQLIPYQLQAAAHLAKMTGTSSGARQAQRLRSI
CRAFFDECRLAEADAERGHD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025704E3_Ub_ligase_UBR4