prot_Ecto-sp6_S_contig9.18113.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18113.1
Unique Nameprot_Ecto-sp6_S_contig9.18113.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length1119
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18113.1 vs. uniprot
Match: D8LLY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY3_ECTSI)

HSP 1 Score: 1300 bits (3365), Expect = 0.000e+0
Identity = 960/1118 (85.87%), Postives = 968/1118 (86.58%), Query Frame = 0
Query:    1 MSPPAESGSRSRAEPALSVAIPPREPATGNAPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHPNTNPPPSAVSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGYLSSALLKSAAAAKIAANDDANNPASEAPTTAGSXXXXXXXEAEGE----KKGAPEVGLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDSSLQVLDLTRCKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVGGIKRGGRRXXXXXKQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXXXAGGGEGGVVLEELELAGNALTLSASQAAAQAKSSSLYKSAGGALSSLLTTFVDESYYNGNSNNRGSVQDASALTPPSPGNPAGGVAERPLRCAVAELGEALAGQGARXXXXXXXXXXXXX-CSSLKAVGLARTGLTGRDAARLAAALRARPADSPLEEVEVGLNGLSVKAAEAIRLAVESPTAPHDRSSSFVDDLEKNGGRGRXXXXXXXXXXRHDPAAPGVDEPGLRSRRGTAAAAPAEERSARRAEGRSASRAEVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVEVFGKRVRFERTGGSPPSPRPGSSPXPSMATAEPDPWSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GRGHEGGHDDSRGGRGPAVLGSDDPENASISSXXXXXXXXXXXXXXXXXXXXXXXGLDSSAAGRGKPGRRNPASRRNFNVRGXXXXXXXXXXXXEPPTKIPGRRIRSSRVAGGADDGEWAAGFETVLAEETKADCENGMDGSGAAKVEWEDGFRESTTGQGAEDSKDGEWAAGFKAVSEXXXXXXXXXXXXXXXXXAEGEWEDGFRESRTEQGAEDXXXXXXXXXXETVSEEAESDCESAMGGGGGXXXXXXXXXXXREPSESRAE-GAEDSDXXXXXXXXXXXXXKEAESDCESAMGSGGAXXXXXXXXXXXRESRREQGAEGGEWAAGFEPVS 1111
            M+PPAESGSRSRAEP+L+VAIPP EPATGNAPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHPNTNPPPSA+SLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGYLSSALLKSAAAAKIAANDDAN+PASEAPTTAG XXXXXXX         KKG  EV LPPPVASGIRRLLLTGNDRLGDAGAKALASALKKD+SLQVLDLTRCK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVGG  RGGRRXX   KQG SSRRGPGLRS XXXXXXXXXXXXXXXXXXXXXXX   GEGGVVLEELELAGNALTLSASQAAAQAKSSSLYKSAGGALSSLLTTFVDESYY GNSNNRGSVQDASALTPPS GNPAGGVAERPLRCAVAELGEALAGQGAR XXXXXXXXXXXX C SLKAVGLARTGLT RDAARLAAALRARP DSPLEEVEVGLNGLSVKAAEAIRLAVESPTAPHDRSSSFVDDLEKNGGRGRXXXXXXXXXXRHDPAAPGVDEPGLRSRRGTA AAPAEERSAR         AEVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVEVFGKRVRFERTGGSPPSPRPGSSPXPSMATAEPDPWSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GRGHEGGHDDSRGGRGPAVLGSDDPENASISS XXXXXXXXXXXXXXXXXXXXXXGLDSSAAGRGKPG RNPASRRNFNVRGXXXXXXXXX   EPPTKIPGRR RSSR AGGADDGEWAAGFETV AEET+AD ENG                               WAAGF+AVSE                 AE EWEDGFRESRTEQGAED          E VSEEAESDCESAMGGGG            RE   SR E       XXXXXXXX     KEAESDCESAMGSG  XXXXXXX    RESRREQGAE G   AGFEPVS
Sbjct:    1 MTPPAESGSRSRAEPSLAVAIPPHEPATGNAPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHPNTNPPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGYLSSALLKSAAAAKIAANDDANSPASEAPTTAGXXXXXXXXXXXXXXXXXKKGGAEVVLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDNSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVGGNNRGGRRXXGASKQGISSRRGPGLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGVVLEELELAGNALTLSASQAAAQAKSSSLYKSAGGALSSLLTTFVDESYYGGNSNNRGSVQDASALTPPSLGNPAGGVAERPLRCAVAELGEALAGQGARGXXXXXXXXXXXXGCPSLKAVGLARTGLTERDAARLAAALRARPVDSPLEEVEVGLNGLSVKAAEAIRLAVESPTAPHDRSSSFVDDLEKNGGRGRXXXXXXXXXXRHDPAAPGVDEPGLRSRRGTATAAPAEERSAR--------GAEVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVEVFGKRVRFERTGGSPPSPRPGSSPXPSMATAEPDPWSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGHEGGHDDSRGGRGPAVLGSDDPENASISSAXXXXXXXXXXXXXXXXXXXXXXGLDSSAAGRGKPGLRNPASRRNFNVRGXXXXXXXXX---EPPTKIPGRRTRSSRDAGGADDGEWAAGFETVSAEETEADPENGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAGFEAVSEEAESDCESAMGGGGAASAEVEWEDGFRESRTEQGAEDSDDGEWAAGFEAVSEEAESDCESAMGGGGAASAEVEWEDGFRE---SRTEQXXXXXXXXXXXXXXELASAKEAESDCESAMGSGXXXXXXXXXKAGFRESRREQGAEXGXXXAGFEPVS 1104          
BLAST of mRNA_Ecto-sp6_S_contig9.18113.1 vs. uniprot
Match: A0A6H5JEB8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB8_9PHAE)

HSP 1 Score: 563 bits (1452), Expect = 3.420e-186
Identity = 395/443 (89.16%), Postives = 404/443 (91.20%), Query Frame = 0
Query:    1 MSPPAESGSRSRAEPALSVAIPPREPATGNAPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHPNTNPPPSAVSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAG--YLSSALLKSAAAAKIAANDDANNPASEAPTTAGSXXXXXXXEAEGEKKGAPEVGLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDSSLQVLDLTRCKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVGGIKRGGRRXXXXXKQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXXXAGGGEGGVVLEELELAGNALTLSASQAAAQAK 441
            M+PPA++ SRSRAEPALS+AIPPREP TGN PLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQ HR+P+TN PPSA+SLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSA DSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAG  YLSSALLKSAAAAKI+ANDD NN A         XXXXXXX      KG  E GLPPP ASGIRRLLLTGNDR+GDAGAKALASALKKDSSLQVLDLTRCK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  HAGSSALECLELQGNHVGDAGAVALADGLVGG KRGGR XXXX KQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXX  GG  GGVVLEELELAGNALTLSASQAAAQAK
Sbjct:   54 MTPPADTSSRSRAEPALSIAIPPREPVTGNTPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQHHRYPDTNSPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSAADSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKISANDDPNNSAXXXXXXXXXXXXXXXXXXXXXXKGGAEFGLPPPAASGIRRLLLTGNDRIGDAGAKALASALKKDSSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLHAGSSALECLELQGNHVGDAGAVALADGLVGGSKRGGRXXXXXAKQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXXK-GGXXGGVVLEELELAGNALTLSASQAAAQAK 495          
BLAST of mRNA_Ecto-sp6_S_contig9.18113.1 vs. uniprot
Match: A0A835Z931_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z931_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.440e-29
Identity = 154/323 (47.68%), Postives = 183/323 (56.66%), Query Frame = 0
Query:   36 QMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHPNTNPPPSAVSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGY--LSSALLKSAAAAKIAANDDANNPASEAPTTAGSXXXXXXXEAEGEKKGAPEVGLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDSSLQVLDLTRCKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGL 356
            Q +D SFS +GP G  +     +G+ E             PS + L+ECSLGD G  +V  S  V    GV  LSLR N +   G R+LL  LR+A D   RL  L LDFN IGDAG QPLPA LK+ +    G LE LSLRFC I  AG   ++SAL K    A++ A+D                                          GIR L L GN  LGDAGAKALA+ALK++ +L+ LDLTRC  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G+S+++ L+L  NH+ D GA A A  L
Sbjct:   53 QFIDLSFSHVGPVGASEV---LSGLSEASAA---------PSGLLLQECSLGDRGALDVVSSTLVSSPEGVGVLSLRHNHIGRVGSRSLLQHLRTAPD---RLQTLVLDFNLIGDAGLQPLPALLKDSS---NGRLESLSLRFCGISAAGCRSIASALSK----AQVNASD-----------------------------------------RGIRHLSLAGNP-LGDAGAKALAAALKQNVALEELDLTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDGASSIQRLDLDHNHIADGGAFAFARAL 311          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLY3_ECTSI0.000e+085.87Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JEB8_9PHAE3.420e-18689.16Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z931_9STRA1.440e-2947.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 302..329
e-value: 1.5E-4
score: 31.1
coord: 135..162
e-value: 21.0
score: 7.8
coord: 274..301
e-value: 8.5E-4
score: 28.6
coord: 245..273
e-value: 2.3
score: 14.5
coord: 103..130
e-value: 0.025
score: 23.7
coord: 416..443
e-value: 41.0
score: 5.8
coord: 331..358
e-value: 0.028
score: 23.6
coord: 530..557
e-value: 210.0
score: 0.8
coord: 380..407
e-value: 0.0054
score: 26.0
coord: 168..193
e-value: 14.0
score: 9.1
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 248..354
coord: 105..187
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 78..433
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 249..268
e-value: 0.39
score: 10.9
coord: 301..324
e-value: 3.9E-4
score: 20.3
coord: 334..353
e-value: 0.012
score: 15.6
coord: 139..156
e-value: 1.4
score: 9.1
coord: 274..296
e-value: 1.4E-4
score: 21.6
coord: 383..402
e-value: 0.43
score: 10.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 240..361
e-value: 2.0E-29
score: 104.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 72..200
e-value: 2.4E-12
score: 48.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1067464..1076102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18113.1mRNA_Ecto-sp6_S_contig9.18113.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1066800..1076102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18113.1 ID=prot_Ecto-sp6_S_contig9.18113.1|Name=mRNA_Ecto-sp6_S_contig9.18113.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1119bp
MSPPAESGSRSRAEPALSVAIPPREPATGNAPLEVQMLDFSFSPLGPRGL
QDTDIDAAGVVEEGQQHRHPNTNPPPSAVSLRECSLGDLGVAEVARSPWV
RGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGD
AGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGYLSSALLKSAAAAKI
AANDDANNPASEAPTTAGSGAGREEEEAEGEKKGAPEVGLPPPVASGIRR
LLLTGNDRLGDAGAKALASALKKDSSLQVLDLTRCKIGDDGARCLANALR
SNSCLRELRLGYNDISADGALALASLLHAGSSALECLELQGNHVGDAGAV
ALADGLVGGIKRGGRRRGGASKQGSSSRRGPGLRSLNLAGNGIGCAGGGA
LAKALVGGKAGGGEGGVVLEELELAGNALTLSASQAAAQAKSSSLYKSAG
GALSSLLTTFVDESYYNGNSNNRGSVQDASALTPPSPGNPAGGVAERPLR
CAVAELGEALAGQGARGRGGGGGGGSGGGCSSLKAVGLARTGLTGRDAAR
LAAALRARPADSPLEEVEVGLNGLSVKAAEAIRLAVESPTAPHDRSSSFV
DDLEKNGGRGRRRPRRQRQRRRHDPAAPGVDEPGLRSRRGTAAAAPAEER
SARRAEGRSASRAEVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVE
VFGKRVRFERTGGSPPSPRPGSSPPPSMATAEPDPWSDDDDGGDGVDDDS
DLGGVSAAATDGSASSWSSSEEDDDDDGRGHEGGHDDSRGGRGPAVLGSD
DPENASISSAADDTEDWDDGGETSDGGDDEERGLDSSAAGRGKPGRRNPA
SRRNFNVRGGGGGGGGGGGGGEPPTKIPGRRIRSSRVAGGADDGEWAAGF
ETVLAEETKADCENGMDGSGAAKVEWEDGFRESTTGQGAEDSKDGEWAAG
FKAVSEEAESDCESAMGGGGAASAEGEWEDGFRESRTEQGAEDSEDGEWD
AGFETVSEEAESDCESAMGGGGGESAEVEWEAGFREPSESRAEGAEDSDD
VEWAAGFEMASAKEAESDCESAMGSGGAESAEVEWEAGFRESRREQGAEG
GEWAAGFEPVSASAEMME*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf