mRNA_Ecto-sp6_S_contig89.17964.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: D8LK83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK83_ECTSI) HSP 1 Score: 271 bits (694), Expect = 2.270e-89 Identity = 139/181 (76.80%), Postives = 145/181 (80.11%), Query Frame = 1
Query: 1 DMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGSP*GLKNKRASKRDFPCGAPRSLLGHQSCLHSWELDAGSSADLDTWMSVLEGVTVRDTQKEAEFSRGTPLAGNPGDSFNFSMELGPFTFAPTPAFRGDSLGVDDYPLIPGHFLLTAPVVDSANLEVTEVGDLILRRGDIPAYPTDYKP 543
DMPLDSSTEV RVEGKHGRPRKDGRFVFRVSTG+P GLKNK +WELDAGSSA LD WMSVLEGVT RDTQKEA FS TP AGNPGDSF FSMELGPFTFAPTPAFRGDS+ VDDYPLIPG FL TAPVV+SANLEVTEVGDLILR+GDIPAYPTD+KP
Sbjct: 12 DMPLDSSTEVARVEGKHGRPRKDGRFVFRVSTGTPRGLKNK-----------------------AWELDAGSSAALDMWMSVLEGVTTRDTQKEALFSGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTDHKP 169
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: D8LK90_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK90_ECTSI) HSP 1 Score: 248 bits (632), Expect = 1.820e-79 Identity = 128/173 (73.99%), Postives = 135/173 (78.03%), Query Frame = 1
Query: 25 EVVRVEGKHGRPRKDGRFVFRVSTGSP*GLKNKRASKRDFPCGAPRSLLGHQSCLHSWELDAGSSADLDTWMSVLEGVTVRDTQKEAEFSRGTPLAGNPGDSFNFSMELGPFTFAPTPAFRGDSLGVDDYPLIPGHFLLTAPVVDSANLEVTEVGDLILRRGDIPAYPTDYKP 543
+VVRVEGKHGRPRKDGRFVFRVSTG+P GLKNK EL+AGSSA LD WMSVLEGVT RDTQKEA FS TP AGNPGDSF FSMELGPFTFAPTPAFRGDS+ VDDYPLIPG L TAPVVDSANLEVTEVGDL+LRRGDIPAYP+D+KP
Sbjct: 56 QVVRVEGKHGRPRKDGRFVFRVSTGTPRGLKNKAR-----------------------ELNAGSSAALDMWMSVLEGVTTRDTQKEALFSGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQILSTAPVVDSANLEVTEVGDLVLRRGDIPAYPSDHKP 205
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: A0A6H5KV41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV41_9PHAE) HSP 1 Score: 252 bits (643), Expect = 1.150e-77 Identity = 131/181 (72.38%), Postives = 138/181 (76.24%), Query Frame = 1
Query: 1 DMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGSP*GLKNKRASKRDFPCGAPRSLLGHQSCLHSWELDAGSSADLDTWMSVLEGVTVRDTQKEAEFSRGTPLAGNPGDSFNFSMELGPFTFAPTPAFRGDSLGVDDYPLIPGHFLLTAPVVDSANLEVTEVGDLILRRGDIPAYPTDYKP 543
DMPLDSSTEVVRVE KHG KDGRFVFRVSTG+P GL NKR WELDAGSSADLD WMSVLEGVT RDTQKE +F TP AG+ G+SF FSMELGPFTFAPTPAFRGDS+ VDDYPLIPG FL TAPVVDSANLE+TEVGDLILR+GDIPAYPTD P
Sbjct: 348 DMPLDSSTEVVRVEDKHGTTSKDGRFVFRVSTGTPRGLTNKR-----------------------WELDAGSSADLDKWMSVLEGVTTRDTQKETDFFGDTPRAGDLGNSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLELTEVGDLILRQGDIPAYPTDDTP 505
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI) HSP 1 Score: 248 bits (632), Expect = 3.700e-74 Identity = 130/181 (71.82%), Postives = 138/181 (76.24%), Query Frame = 1
Query: 1 DMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGSP*GLKNKRASKRDFPCGAPRSLLGHQSCLHSWELDAGSSADLDTWMSVLEGVTVRDTQKEAEFSRGTPLAGNPGDSFNFSMELGPFTFAPTPAFRGDSLGVDDYPLIPGHFLLTAPVVDSANLEVTEVGDLILRRGDIPAYPTDYKP 543
DMPLDSSTEVVRVE KHGRPRKDGRFVFRVSTG P GL NKR WELDAGSSADLDT MSVLEGVT D +KEA+ TP AG+ GDSF FSMELGPFTFAPTPAFRGDS+ +DDYPLIPG FL TAPVV+SANLEVTEVGDLILR+GDIPAYPT+ P
Sbjct: 598 DMPLDSSTEVVRVESKHGRPRKDGRFVFRVSTGIPRGLTNKR-----------------------WELDAGSSADLDTLMSVLEGVTTPDFEKEADVFADTPRAGDLGDSFKFSMELGPFTFAPTPAFRGDSISIDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTP 755
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI) HSP 1 Score: 250 bits (638), Expect = 1.490e-73 Identity = 132/181 (72.93%), Postives = 139/181 (76.80%), Query Frame = 1
Query: 1 DMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGSP*GLKNKRASKRDFPCGAPRSLLGHQSCLHSWELDAGSSADLDTWMSVLEGVTVRDTQKEAEFSRGTPLAGNPGDSFNFSMELGPFTFAPTPAFRGDSLGVDDYPLIPGHFLLTAPVVDSANLEVTEVGDLILRRGDIPAYPTDYKP 543
DMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTG P GL NKR WELDAGSSADLD MSVLEGVT RD +KEA+F TP AG+ GDSF FS ELGPFTFAPTPAFRGDS+ VDDYPLIPG FL TAPVV+SANLEVTEVGDLILR+GDIPAYPT+ P
Sbjct: 1644 DMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGVPRGLTNKR-----------------------WELDAGSSADLDKRMSVLEGVTTRDFEKEADFFWDTPRAGDLGDSFKFSTELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTP 1801
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: A0A6H5JC81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC81_9PHAE) HSP 1 Score: 189 bits (479), Expect = 8.470e-57 Identity = 93/122 (76.23%), Postives = 103/122 (84.43%), Query Frame = 1
Query: 178 QSCLHSWELDAGSSADLDTWMSVLEGVTVRDTQKEAEFSRGTPLAGNPGDSFNFSMELGPFTFAPTPAFRGDSLGVDDYPLIPGHFLLTAPVVDSANLEVTEVGDLILRRGDIPAYPTDYKP 543
+SC W+ DAGSS LD W+S+LEGVT D QKEA+F TP AGNPGDSF FS+ELGPFTFAPTPAFRGDS+ VDDYPLIPG FL TAPVVDSANLEVTEVGD+ILR+GDIPAYPT+ KP
Sbjct: 50 KSC--QWDFDAGSSLALDAWISLLEGVTTLDYQKEADFWGDTPRAGNPGDSFKFSIELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEVGDVILRQGDIPAYPTNPKP 169
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: A0A6H5KF80_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF80_9PHAE) HSP 1 Score: 156 bits (395), Expect = 2.750e-45 Identity = 84/126 (66.67%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 1 DMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGSP*GLKNKRASKRDFPCGAPRSLLGHQSCLHSWELDAGSSADLDTWMSVLEGVTVRDTQKEAEFSRGTPLAGNPGDSFNFSMELGPFTFAPTP 378
DMPLDSSTEVVRVEGKHGR RKDGRFVFRVSTG+P GL NKR WELDAGSSADLD WMSVLEGVT RDTQKE +F T AG+ G+SF FSMELGPFTFA P
Sbjct: 54 DMPLDSSTEVVRVEGKHGRTRKDGRFVFRVSTGTPRGLTNKR-----------------------WELDAGSSADLDKWMSVLEGVTTRDTQKETDFFGDTTRAGDLGNSFKFSMELGPFTFARRP 156
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: D8LQD9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD9_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.090e-33 Identity = 79/184 (42.93%), Postives = 104/184 (56.52%), Query Frame = 1
Query: 1 DMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGSP*GLKNKRASKRDFPCGAPRSLLGHQSCLHSWELDAGSSADLDTWMSVL-EGVTVRDTQKEAEFSR--GTPLAGNPGDSFNFSMELGPFTFAPTPAFRGDSLGVDDYPLIPGHFLLTAPVVDSANLEVTEVGDLILRRGDIPAYPTDYKP 543
+ PLD S+EVVR+ + +GRF+FRV +G P G N + W LDA S ++LD W+S+L E + + + E +R G PLA N GDS S +LGP T +PAFRG S+ DYPL G FL TAP+VDS N+E+TE+GD+ILR GDIPA+ D P
Sbjct: 187 EQPLDRSSEVVRLSEQDVGKAGNGRFMFRVVSGDPRGKTNTK-----------------------WTLDAESQSELDAWVSILTEAIIAQGPAGDEETNRLDGAPLAQNLGDSSVTSSKLGPDTPEVSPAFRGQSMAPGDYPLQTGQFLSTAPLVDSTNVEITEIGDVILRAGDIPAFSGDKSP 347
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: D8LKF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF0_ECTSI) HSP 1 Score: 125 bits (315), Expect = 9.210e-33 Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 1
Query: 295 RGTPLAGNPGDSFNFSMELGPFTFAPTPAFRGDSLGVDDYPLIPGHFLLTAPVVDSANLEVTEVGDLILRRGDIPAYPTDY 537
+ TP A + G SF FSMELGPFTFAPTP FRG+S+ VDDYPLIPG FL APVV+SANLEVTEV DLILR+GDIPAYPT +
Sbjct: 35 KDTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSISVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGH 115
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Match: D8LQD2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD2_ECTSI) HSP 1 Score: 123 bits (308), Expect = 9.540e-31 Identity = 75/184 (40.76%), Postives = 101/184 (54.89%), Query Frame = 1
Query: 1 DMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGSP*GLKNKRASKRDFPCGAPRSLLGHQSCLHSWELDAGSSADLDTWMSVL-EGVTVRDTQKEAEFSR--GTPLAGNPGDSFNFSMELGPFTFAPTPAFRGDSLGVDDYPLIPGHFLLTAPVVDSANLEVTEVGDLILRRGDIPAYPTDYKP 543
+ PLD S+EVVR+ + +GRF+FRV +G P G N + W LDA S ++LD W+S+L E + + + E +R G PLA N GDS S +L P T +PAFRG + DYPL G FL TA +VDS N+E+TE+GD+I+R GDIPA+ D P
Sbjct: 47 EQPLDRSSEVVRLSEQDVGKAGNGRFMFRVVSGDPRGKTNTK-----------------------WTLDAESQSELDAWVSILTEAIIAQGPAGDEETNRLDGAPLAQNLGDSSVTSSKLEPDTPDASPAFRGHVMSPGDYPLQTGQFLSTASLVDSTNVEITEIGDVIVRAGDIPAFSGDKPP 207 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig89.17964.1 >prot_Ecto-sp6_S_contig89.17964.1 ID=prot_Ecto-sp6_S_contig89.17964.1|Name=mRNA_Ecto-sp6_S_contig89.17964.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=102bp MSVLEGVTVRDTQKEAEFSRGTPLAGNPGDSFNFSMELGPFTFAPTPAFRback to top mRNA from alignment at Ecto-sp6_S_contig89:517318..518638- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig89.17964.1 ID=mRNA_Ecto-sp6_S_contig89.17964.1|Name=mRNA_Ecto-sp6_S_contig89.17964.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1321bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:517318..518638- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:517318..518638- >mRNA_Ecto-sp6_S_contig89.17964.1 ID=mRNA_Ecto-sp6_S_contig89.17964.1|Name=mRNA_Ecto-sp6_S_contig89.17964.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=306bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:517318..518638- (Ectocarpus species6 EcLAC_371)back to top |