mRNA_Ecto-sp6_S_contig86.17742.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI) HSP 1 Score: 919 bits (2375), Expect = 0.000e+0 Identity = 494/502 (98.41%), Postives = 497/502 (99.00%), Query Frame = 1
Query: 1 MMGMTAWSGSAAAAGLLWFLLLAGTRVQTGFAGSIRLTECPADAPEATFSWTNDGDYLYVEGDGSCVTLPDIYNGVDNPPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVGESLIDDSDGLVWSDNEVEEDFEIGIETTCLSSESDFDQISAGGSNPSEC 1506
MMGMTAWSGSAAA GLL FLLLAGTRVQTG AGSIRLTECPADAPEATFSWTNDGDYLYVEGDGSCVTLPDIYNGVDNPPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVS KEPDAGAYDGSNPRSYMSAVSEMTHPSDTC+GAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGV ESLIDDSDGL+WSDNEVE+DFEIGIETTCLSSESDFDQISAGGSNPSEC
Sbjct: 1 MMGMTAWSGSAAA-GLLLFLLLAGTRVQTGSAGSIRLTECPADAPEATFSWTNDGDYLYVEGDGSCVTLPDIYNGVDNPPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVEESLIDDSDGLLWSDNEVEDDFEIGIETTCLSSESDFDQISAGGSNPSEC 501
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI) HSP 1 Score: 505 bits (1300), Expect = 6.590e-175 Identity = 288/406 (70.94%), Postives = 319/406 (78.57%), Query Frame = 1
Query: 289 IWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVGESLIDDSDGLVWSDNEVEEDFEIGIETTCLSSESDFDQISAGGSNPSEC 1506
IWL+TK+++M GTTLLLHDDLGC +TSWSV + PD GAYDG N RS++SAVSEMTHPSDTC+GAADDDAGEAR+DIINS+V YLGYQA+ESYG++YKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQ YGFDPHDDSDNLRIHNNIVYENGNHGIIASKRC XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +GSGSACIAIFESF IEISDN+CT NEEGIRLSMGSSYNKIFDNQVIDTAGRS+W+YLGSDE+ ASAATDGMCTGNLFQNNYL+G+ GV +ETRD MLIGNT + + DSDGLVW DN ++ DF++ TC++SESDFDQI+ GSNPSEC
Sbjct: 3 IWLMTKNIFMESGTTLLLHDDLGCD---------------------------LTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQASESYGISYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQQ-------------------YGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFDIEISDNLCTQNEEGIRLSMGSSYNKIFDNQVIDTAGRSIWMYLGSDEVEASAATDGMCTGNLFQNNYLEGSETGVAMTETRDTMLIGNTFIDTDNNEWKDSDGLVWRDNNIDGDFDMRFSDTCVTSESDFDQINGVGSNPSEC 362
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE) HSP 1 Score: 329 bits (844), Expect = 4.350e-104 Identity = 223/465 (47.96%), Postives = 297/465 (63.87%), Query Frame = 1
Query: 136 EATFSWTNDGDYLYVEGDGSCVTLPDIY-----NGVDNP------------PLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSE-MTHPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVGESLIDDSDGLVWSDNEVEEDFEIGIETTCLSSESDFDQI 1476
+A+ + + D LY+EG G C+T DIY N ++ P+T T DG+ SD ETG WL T +Y+ G L LH + G T +R+ S S + L GG++S+LNT+++SW V + + A + S PRSY++A+SE + P TC G A +DAGEAR DIINS+V +LG+ E+YG+T+KVRG+C D SN ++FDRVNVRGDIRFSDIHHN+FG Y+YGHQDGLWEYN M + YGFDPHDDSDNLRIHNNIV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AIFES + S+N CTDN+ G R S+G+S+NKI+DN+V D+ +++Y GSD S DG+ + N+ NN +D A+ G+K +T N GN + + +S ++W DN++ +I E +C +S+SD Q+
Sbjct: 36 KASLRFNIETDRLYLEG-GGCITPSDIYLAKLTNVTEDDGNTLTAEEAAAIPITPITKDGEFSDAETGYWLFTSDVYIYDGVKLELHAESGTTGMRLKSDS-KVIELRAHGGWLSLLNTELSSWDVDEADY---ASNYSAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAKYGFDPHDDSDNLRIHNNIVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFESMEGDYSNNKCTDNKYGFRWSVGASHNKIYDNEVYDSQQYGIYMYEGSDLPYVS---DGLPSYNIIANNIIDTATEGIKMGDTVGNEFTGNVITNTADLRFRNSSEVIWKDNDIPAGVDIDSEGSCFTSDSDIVQL 492
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 286 bits (732), Expect = 3.150e-87 Identity = 189/472 (40.04%), Postives = 255/472 (54.03%), Query Frame = 1
Query: 115 ECPADAPEATFSWTNDGDYLYVEGD-----GSCVTLPDIYNG-VDNPPLTYHTVD---GDESDTETGIWLLTKHLYMRPGTTLLLH--DDLG-CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTM-VGVGESLI---DDSDGLVWSDNEV--EEDFEIGIET-TCLSSESD 1464
+C +D E + + LY+E G C TL I+ PL + VD GD S+TETG WLLT+ LY+ G TL ++ D+ G ELR+ S+S ++L GG + + TKV SW S PD DG RSY+SAVSE+ T +TCEG A + GEAR+DI NS++GYLG+Q +ESYGLT+KVRG+C D+SNPE+FD VNV G++ SDIHH FG Y+YGHQ G W N M ++ YGFDPHDDSD L IH+N VY NG HGIIASKRC V +G A +A+ ESF ++S+N +N+ G+R+S+G + N +N + + + + + YLGSDE + G N+F N GA +K E + N VG + L+ DD+ V N E DFE+ + +C ESD
Sbjct: 42 DCDSDI-EVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPL--YAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDG---RSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDE--PDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 276 bits (706), Expect = 7.810e-84 Identity = 170/406 (41.87%), Postives = 221/406 (54.43%), Query Frame = 1
Query: 172 LYVEGD-----GSCVTLPDIYNG-VDNPPLTYHTVD---GDESDTETGIWLLTKHLYMRPGTTLLLHDDLG---CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNT 1344
LY+E G CVTL I+ VD PL + VD GD S + TG WLLT+ +Y+ G TL +H ELR+ S+S +HL +GG + L+TKV +W SK PD DG RSY+SAVSE+ T TC G A ++ GEAR+DI NS++ YLGY E+YGLT+KVRG+C D+ NPE+FD VNV G+I SDIHHN FG Y+YGHQ G W N M ++ YGFDPHDDSD L IH+N V+ NG HGIIASKRC V +G A +A+ ESF ++SDN +N+ G+RLS+G N N + +A + + YLG+D+ G N+F N + G + E I NT
Sbjct: 27 LYIESANGRTRGGCVTLEQIWEQQVDGSPL--YAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG---RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADK--PEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNT 425
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 273 bits (699), Expect = 1.740e-82 Identity = 173/393 (44.02%), Postives = 225/393 (57.25%), Query Frame = 1
Query: 190 GSCVTLPDIYNGV--DNPPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLG---CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSG--SACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNT 1344
G CVTL I+ + P + GD SD+ TG WLLT+ L++ G TL +H ELR+ S+S ++L GG + L+TKV +W S PD DG RSY+SAVSE+ T S TC G A ++ GEAR+DI +S++GYLGY +ESYGLT+KVRG+C D+SN ++F+ VNV G+I SDIHHN FG Y+YGHQ G W N M ++ YGFDPHDDSD L IH+N VY+NG HGIIASKRC XXXXXXXXX A +A+ ESF ++SDN+ +N+ GIR S+GS N F+N + + S + YLGSD G N+FQ N + G +K + I NT
Sbjct: 64 GGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDG---RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDA--PDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNT 451
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 271 bits (694), Expect = 1.220e-81 Identity = 168/411 (40.88%), Postives = 227/411 (55.23%), Query Frame = 1
Query: 190 GSCVTLPDIYNG-VDNPPLTYHTVD---GDESDTETGIWLLTKHLYMRPGTTLLLH-DDLG--CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVGESLIDDSDGLV 1392
G CVTL I+ PL + VD G+ S + TG WLLT+ LY+ G TL ++ + G ELR+ S++ ++L GG + ++TKV SW S PD DG RSY+SA+SE+ T +TCEG A + GEAR+DI +S++GYLGY +ESYGLT+KVRG+C D+SNPEVFD VNV G++ SDIHH FG Y+YGHQ G W N M ++ YGFDPHDDSD L IH+N VY NG HGIIASKRC V +G A +A+ ESF ++S+N +N+ G+R S+G + N +N + + A + + YLG+DE + G N+F N GA +K E + N + D+DGLV
Sbjct: 67 GGCVTLGQIWESRAGKGPL--YAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDE--PDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFE------VGDADGLV 464
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 271 bits (693), Expect = 4.440e-78 Identity = 176/458 (38.43%), Postives = 236/458 (51.53%), Query Frame = 1
Query: 172 LYVEGDGSCVTLPDIYN--GVDNP-----PLTYHTVDGDESDTETGI---WLLTKHLYMRPGTTLLLHDDLG---CTELRIASSSTNALH-LNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVGESLIDDSDGLVWSDNEVEEDFEIGIETTCLSSESDFDQISAGGSNP 1497
LY EG+G C T+ D+YN G +N P+ DG + D +GI WLL LY+ G C +LRI S+ ++ H + GG + +T VTSW KEP +G RS+++ VSE D CEG A ++ GE R+DIINS++ YLGY +ESYG+T+KVRG+C D SNPEVF+ NV GD+ SDIHH ++G YSYGHQ G+W N M ++ YGFDPHDDSD L I N VY N NHGIIASKRC +T A IA+ ESF +I N+ + GIR+S+GS N+++ N D + L+ Y GSDE S DG +GN+ N ++ IGVK E DN NT + V +S +WS N++ + C+ + +FD S S P
Sbjct: 442 LYAEGEG-CFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENG---RSFLNCVSEKL-TGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS---DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG--------CIEEDDEFDAASGSDSIP 883
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 259 bits (662), Expect = 1.280e-77 Identity = 176/461 (38.18%), Postives = 239/461 (51.84%), Query Frame = 1
Query: 178 VEGDGS-CVTLPDIY-------NGVDNPPL----TYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDD-LG--CTELRIASSS-TNALHLNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVGESLIDDSDGLVWSDNEVEEDFEIGIETTCLSSESDFDQISAGGSNPSEC 1506
EGDG C TL D+Y NG P+ + VD + + T TG WLLT L++ G TL +G C ELRI S+S ++ + GG + +T VTSW V ++P DG RS++ VSE+ DTC A ++ GE R+DII+S++GYLGY A+E+YG+T+KVRG+C+D SNP+VFD VNV GD++ SDIHH ++G YS+GHQ G+W N M ++ YGFDPHDDSD L I N VY N NHGIIASKRC +T G A IA+ E+ G +I DN E GIR+ +GSS NK+ DN + ++ Y+GSDE G N F NN + GVK E+ + + N G E +++ +VWS N + + TCL + + P EC
Sbjct: 4 AEGDGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVD-ETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG---RSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG---GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTN-------TCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 258 bits (658), Expect = 2.020e-76 Identity = 161/350 (46.00%), Postives = 211/350 (60.29%), Query Frame = 1
Query: 190 GSCVTLPDIYNGVDN--PPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLG---CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSKKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCEGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSD 1215
G CVTL DI+ +D P GD S + TG WLLT+ LY+ G TL +H ELR+ S+S + ++L GG + ++TKV +W SK + D S RSY+SAVSE+ T C+G A + GEAR+DI +S++ YLGY +ESYGLT+KVRG C D SN EVFD VNV G+I SDIHHN+FG Y+YGH+ G W N M ++ YGFDPHDDSD L IH+N VY NGNHGIIASKRC XXXXXXXXXX V +G A +A+ E+F ++S+N DN+ GIR+S+G + N N + ++ +++ Y GSD
Sbjct: 64 GGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRT---DDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSD 410 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig86.17742.1 >prot_Ecto-sp6_S_contig86.17742.1 ID=prot_Ecto-sp6_S_contig86.17742.1|Name=mRNA_Ecto-sp6_S_contig86.17742.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=503bp MMGMTAWSGSAAAAGLLWFLLLAGTRVQTGFAGSIRLTECPADAPEATFSback to top mRNA from alignment at Ecto-sp6_S_contig86:357126..367345- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig86.17742.1 ID=mRNA_Ecto-sp6_S_contig86.17742.1|Name=mRNA_Ecto-sp6_S_contig86.17742.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10220bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:357126..367345- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:357126..367345- >mRNA_Ecto-sp6_S_contig86.17742.1 ID=mRNA_Ecto-sp6_S_contig86.17742.1|Name=mRNA_Ecto-sp6_S_contig86.17742.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1509bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:357126..367345- (Ectocarpus species6 EcLAC_371)back to top |