mRNA_Ecto-sp6_S_contig83.17543.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig83.17543.1
Unique NamemRNA_Ecto-sp6_S_contig83.17543.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: D7G276_ECTSI (Mitochondrial import inner membrane translocase subunit TIM23 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G276_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 1.810e-128
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 3 
Query:   45 MASEPAEESGGVQDPYSDASAKYGPLKLPELQNVDLSKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGIIF 662
            MASEP EESGGVQDPYSDASAKYGPLKLPELQNVDLSKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGIIF
Sbjct:    1 MASEPTEESGGVQDPYSDASAKYGPLKLPELQNVDLSKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGIIF 206
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: D7G275_ECTSI (Phosphatidate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G275_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 5.450e-42
Identity = 104/110 (94.55%), Postives = 105/110 (95.45%), Query Frame = -2 
Query: 4128 VSPAIGASVAAETDGRDINGFVPALGGERGDGSKSKGQASRRPSLADSGGSXXXXXXXXXKEAASSKAKGPPTIPRRWEEVAPRREKSFYPNRAAVEDRFTDLNFWRDPP 4457
            VSPA GASVA +TDGRDINGFVPALGGERGDGSKSKGQASRRPSLADSG S XXXXXXXXKEAASSKAKG PTIPRRWEEVAPRREKSFYPNRAAVEDRFTDLNFWRDPP
Sbjct: 1449 VSPATGASVA-DTDGRDINGFVPALGGERGDGSKSKGQASRRPSLADSGSSGXXXXXXXXKEAASSKAKGAPTIPRRWEEVAPRREKSFYPNRAAVEDRFTDLNFWRDPP 1557
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: A0A7S1XNQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNQ0_9STRA)

HSP 1 Score: 150 bits (380), Expect = 8.990e-38
Identity = 79/183 (43.17%), Postives = 117/183 (63.93%), Query Frame = 3 
Query:  123 KLPELQNVDLS---KMYGGAAQGK--EPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGI 656
            +LP +  +D +    + GG + G   EPEYLDY IK RG  E +    G  Y+ G++GGG  G+ EG   +P+ R R+L NSIMN+AGK+GS  GN F  +A +Y+    L D + VD      Q G+G+ +NP+L+GASTGLLYKS+AGPR A++A+V G G +G ++ V++  +++LG  +
Sbjct:   12 ELPPIPGIDFTLKQPIGGGLSTGSRYEPEYLDYTIKSRGPLENVFSYCGTAYLAGVIGGGGVGLMEGVRSSPSSRFRILFNSIMNNAGKRGSRAGNAFGCVALFYSGFLALYDGYNVDM-----QLGVGDWVNPVLSGASTGLLYKSTAGPRAAILAAVLGGGVIGASFGVEEVVSNMLGYRV 189
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: A0A6H5JPH1_9PHAE (LNS2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH1_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 1.630e-36
Identity = 88/110 (80.00%), Postives = 93/110 (84.55%), Query Frame = -2 
Query: 4128 VSPAIGASVAAETDGRDINGFVPALGGERGDGSKSKGQASRRPSLADSGGSXXXXXXXXXKEAASSKAKGPPTIPRRWEEVAPRREKSFYPNRAAVEDRFTDLNFWRDPP 4457
            VSPA GASVA ++DGR INGFVPA+GGERGDG +SKGQASRRPSLAD G S         KEAA +KAKG PTIPRRWEEVAPRREKSFYPNRAAVEDRFTDLNFWRDPP
Sbjct: 1705 VSPATGASVA-DSDGRGINGFVPAVGGERGDGIRSKGQASRRPSLADRGSSGGGGIGA--KEAAGAKAKGAPTIPRRWEEVAPRREKSFYPNRAAVEDRFTDLNFWRDPP 1811
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: A0A835Z638_9STRA (Mitochondrial import inner membrane translocase subunit TIM23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z638_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.210e-36
Identity = 88/207 (42.51%), Postives = 121/207 (58.45%), Query Frame = 3 
Query:   45 MASEPAEESGGVQDPYSDASAKYGPLKLPELQ--NVDLSK---MYGGAAQGK-EPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLG 647
            M+S  A    G  DPY+D  AK+G L+LP+L   ++DL     MYG    G  EP+YLDYNIKGR  +E+  YN G  Y+ GI+GGG  GV EG   AP+ R+R+ +N+I+N AGK+GS  GNT AVLA +YT  E + D  EVD      + G  E ++P+LAG++   L+ +    R   +A VAG   +G  Y       S++G
Sbjct:    1 MSSGQAGPESGDNDPYTDPGAKFGRLELPKLNTSSIDLGSLAGMYGVQGGGAYEPDYLDYNIKGRDTFEKTTYNTGMCYLAGIIGGGGYGVLEGARTAPSSRARIRVNAILNAAGKRGSRAGNTLAVLAMFYTGFEFMFDSLEVDA-----KVGDAEWLHPVLAGSAAMTLFYTGKNVRTMALAGVAGGAGMGALYLGTTALGSLIG 202
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: A0A4D9D4E0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4E0_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.720e-33
Identity = 81/163 (49.69%), Postives = 109/163 (66.87%), Query Frame = 3 
Query:  141 NVDL---SKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 620
            NVDL   + +YG A++ +EP+YLDY+IKGRG  ERM   +G+ Y+TGIL GG  G R G+  AP+ R  + LNS+MN AGK GS +GN   V A  Y+ +E+LLDHFE D++    QA     +NP+L+GA +GLLYKS+A PR A +ASV G    G+ Y +
Sbjct:   27 NVDLRTVAPLYGVASE-EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRTGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQA-----VNPVLSGAISGLLYKSTAAPRTAALASVLGGFGAGMFYVI 183
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: W7TXH2_9STRA (Mitochondrial import inner membrane translocase subunit tim23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXH2_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.400e-33
Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 3 
Query:   60 AEESGGVQDPYSDASAKYGPLKLPELQ-----NVDL---SKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 620
            ++ S G+ D  + +S       LP++      NVDL   + +YG A++ +EP+YLDY+IKGRG  ERM   +G+ Y+TGIL GG  G R G+  AP+ R  + LNS+MN AGK GS +GN   V A  Y+ +E+LLDHFE D++    QA     +NP+L+GA +GLLYKS+A PR A +ASV G    G+ Y +
Sbjct:   61 SQSSPGMVDNNTSSSYSASDDNLPKIDLFGGGNVDLRTVAPLYGVASE-EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRRGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQA-----VNPVLSGAISGLLYKSTAAPRTAALASVLGGFGAGMFYVI 249
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: A0A7S0AZQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AZQ3_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.500e-30
Identity = 75/185 (40.54%), Postives = 108/185 (58.38%), Query Frame = 3 
Query:   75 GVQDPYSDASAKYGPLKLPELQNVDLSKMYGG-AAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMG-PVQQAGLGEI-INPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 620
            GV+ PY D  A   PL   +  ++ L+ +        ++P+YLDY+ KGRG    M  N G  Y+ GI+ GG  G+REG    P+ R +V LNS++NH G+ GS+ GN   V +  Y+  E L DH+++DQ   PV    +GE+  +P  A   TG+ YK++AGPR+A +A   GLGAVG  YA+
Sbjct:   18 GVERPYDDTDAG-SPLPSFDASSIKLTTVAPALGVPTQQPDYLDYDTKGRGVVVTMFANTGVSYLLGIVAGGVYGLREGLLHTPSSRFKVKLNSVLNHCGRHGSWAGNVLGVASIMYSLFEGLADHYDLDQYTRPV----VGEVPASPAFAALMTGVTYKATAGPRVAALAGTIGLGAVGATYAL 197
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: A0A7S2QVE9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVE9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.870e-28
Identity = 64/168 (38.10%), Postives = 99/168 (58.93%), Query Frame = 3 
Query:  117 PLKLPELQNVDLSKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 620
            P  LP L  +DL ++ GG     EPEYLDY+IKGRG+W+R   + G  Y+ G   GG  GV+ G +  PN R +V +N+++NH+G+ GS  GN    +A  Y+  E   +  +V++       G   ++ P++    +G++YKS+AGPR+A ++   G+G VG  YAV
Sbjct:    8 PPTLPSLDGIDLRRVAGGITS--EPEYLDYDIKGRGWWDRTVSSTGWGYLIGTGVGGIYGVKTGMSSVPNSRFKVKVNALLNHSGRYGSRVGNAVGCVALLYSLFEGASEKLDVEKY-TYSIIGHSPLVTPMIGSIMSGIVYKSTAGPRVAALSGTIGMGTVGGYYAV 172
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BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Match: A0A7S2A828_TRICV (Hypothetical protein n=3 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A828_TRICV)

HSP 1 Score: 125 bits (314), Expect = 1.460e-27
Identity = 69/146 (47.26%), Postives = 88/146 (60.27%), Query Frame = 3 
Query:  186 EPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQM-GPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 620
            +P+YLDY+ KGRG    M  NAG  Y+ GI GGG  G+REG  + P+ R +V LNS++NH G+ GS  GN   VL+  Y+  E L DH+EV+   GP+Q A      +  LA   TG  Y S AGPR+A +A   GLG VGV Y V
Sbjct:  161 QPDYLDYDTKGRGVVVTMFANAGVSYLMGIFGGGLYGLREGLTQTPSSRFKVKLNSVLNHCGRHGSRAGNVLGVLSVMYSLYEGLADHYEVENYTGPIQPA------SQPLAAFLTGATYYSRAGPRVAALAGTIGLGTVGVTYGV 300
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G276_ECTSI1.810e-12899.51Mitochondrial import inner membrane translocase su... [more]
D7G275_ECTSI5.450e-4294.55Phosphatidate phosphatase n=1 Tax=Ectocarpus silic... [more]
A0A7S1XNQ0_9STRA8.990e-3843.17Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6H5JPH1_9PHAE1.630e-3680.00LNS2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z638_9STRA2.210e-3642.51Mitochondrial import inner membrane translocase su... [more]
A0A4D9D4E0_9STRA1.720e-3349.69Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TXH2_9STRA2.400e-3344.62Mitochondrial import inner membrane translocase su... [more]
A0A7S0AZQ3_9STRA2.500e-3040.54Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S2QVE9_9STRA1.870e-2838.10Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A7S2A828_TRICV1.460e-2747.26Hypothetical protein n=3 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:565221..574742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score408.3
Seed ortholog evalue2.1e-111
Seed eggNOG ortholog2880.D7G276
Preferred nameTIMM23
Model size4557
KEGG rclassRC00034
KEGG koko:K00430,ko:K17794
KEGG TC3.A.8.1
KEGG ReactionR00602,R02596,R03919,R04007,R07443
KEGG Pathwayko00940,ko01100,ko01110,ko04212,map00940,map01100,map01110,map04212
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005758,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009719,GO:0009725,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010604,GO:0010628,GO:0010954,GO:0014070,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019222,GO:0019866,GO:0019899,GO:0022804,GO:0022857,GO:0022884,GO:0030150,GO:0030162,GO:0030943,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031323,GO:0031325,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032268,GO:0032270,GO:0032592,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042221,GO:0042277,GO:0042719,GO:0042886,GO:0042887,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0045862,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051641,GO:0051649,GO:0055085,GO:0060255,GO:0061024,GO:0065002,GO:0065007,GO:0070013,GO:0070585,GO:0070613,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0080090,GO:0090150,GO:0090151,GO:0097066,GO:0098573,GO:0098796,GO:0098798,GO:0098800,GO:1901698,GO:1901700,GO:1903317,GO:1903319,GO:1904680,GO:1905242,GO:1990351,GO:1990542
Exons7
EggNOG free text desc.protein import into mitochondrial matrix
EggNOG OGsCOG5596@1,KOG3324@2759
Ec32 ortholog descriptionMitochondrial import inner membrane translocase subunit TIM23 homolog
Ec32 orthologEc-16_002190.1
EC1.11.1.7
Cds size621
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17543.1prot_Ecto-sp6_S_contig83.17543.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig83 565265..570787 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350466.9782887-UTR-Ecto-sp6_S_contig83:565220..5652641682350466.9782887-UTR-Ecto-sp6_S_contig83:565220..565264Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig83 565221..565264 +
1682350467.0536106-UTR-Ecto-sp6_S_contig83:570787..5741721682350467.0536106-UTR-Ecto-sp6_S_contig83:570787..574172Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig83 570788..574172 +
1682350467.061482-UTR-Ecto-sp6_S_contig83:574235..5747421682350467.061482-UTR-Ecto-sp6_S_contig83:574235..574742Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig83 574236..574742 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350466.9921677-CDS-Ecto-sp6_S_contig83:565264..5652741682350466.9921677-CDS-Ecto-sp6_S_contig83:565264..565274Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 565265..565274 +
1682350467.001928-CDS-Ecto-sp6_S_contig83:566929..5670541682350467.001928-CDS-Ecto-sp6_S_contig83:566929..567054Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 566930..567054 +
1682350467.0122674-CDS-Ecto-sp6_S_contig83:567808..5678991682350467.0122674-CDS-Ecto-sp6_S_contig83:567808..567899Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 567809..567899 +
1682350467.021899-CDS-Ecto-sp6_S_contig83:569047..5691881682350467.021899-CDS-Ecto-sp6_S_contig83:569047..569188Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 569048..569188 +
1682350467.032292-CDS-Ecto-sp6_S_contig83:570108..5702491682350467.032292-CDS-Ecto-sp6_S_contig83:570108..570249Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 570109..570249 +
1682350467.0449853-CDS-Ecto-sp6_S_contig83:570674..5707871682350467.0449853-CDS-Ecto-sp6_S_contig83:570674..570787Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 570675..570787 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig83.17543.1

>prot_Ecto-sp6_S_contig83.17543.1 ID=prot_Ecto-sp6_S_contig83.17543.1|Name=mRNA_Ecto-sp6_S_contig83.17543.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=207bp
MASEPAEESGGVQDPYSDASAKYGPLKLPELQNVDLSKMYGGAAQGKEPE
YLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVL
LNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLG
EIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVL
GQGIIF*
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mRNA from alignment at Ecto-sp6_S_contig83:565221..574742+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig83.17543.1 ID=mRNA_Ecto-sp6_S_contig83.17543.1|Name=mRNA_Ecto-sp6_S_contig83.17543.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9522bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:565221..574742+ (Ectocarpus species6 EcLAC_371)
AGTCAGAGTCTCACAGCATCACGCGAGCCCTGCAAGGAACCACCATGGCA
TCAGGTCTGCTGTTCTTTTCGCTATGCATCGTGTCTGTTCCACCTTGCCC
TTCCGATTCGGCTTGTCTGCTGTATTTTGTCGTGCCTCCTCGCCTTGACC
GGGAGCTGTTGGCCTGGGCCCTACAGCAAGTATGCGGCTGTTCGCTGCCA
CAACGCCACAACTGCTGCGTTGGTCGTGTGTCGAAGGCGTACACTCCGTA
CACCACAATCTGAGCAGGGCACTGGGCAACGCTGAGCCGATTTTTGGTTG
CTATATGTAGATACATGGAGTTGCCGGACTCACTCGAAAGGGCACGACAC
AGCCAACCCGGGCGTGCGTGCCGCTAGCGGGTAGAAGTATTTATGCAGTG
TTCTGTATACTGCTTTTGTTGTGGAGTGGAGCATGAACTCTTGCAGTAAT
AATACAACACCGGTATCTCTTTTGCAGTGCTCTCGGGCAGCTGATGTTGA
TCTCGATTACGCATACCGTGGTTATCGTGAAATTACCAGAAAGTATGTGA
TGAAGATGCTGCATTACAGGATGCTGCCGCGCTACCTTGCTAATAGCACG
CGCAAAGATGGATACTTGTTTGACACCCAAGGCCGATTTCGAATCTCGGC
CAGTAGAAACAAACTGGAACCAGCAGACAAGGGTGTATGTGTAGTGCTCA
TCATAGACACCACGAAACGCTTGTTAAAGATCCGAGGTAAGGAGTTTTTT
TTTGGAGCACACTATATGCATAGCATAACAATCCGCAATCTGACTTCCGC
CCGCTCAGAATAGCAGTCTCGGGGGTGCTTTGTTGATACGCGTTGCACGG
CGAGCACCGCCTTCACTCACTGATTTGTTGATACGCAGTACCTGTGTTTG
TGTGCCCTCGCCAACAGGAATCGTCGATTGCCCTCCATAGACGGCTCGTT
GCACGTCACGTTTACTCGCAGTCCATCTGTTGAATGCTTGCACGCTGCAA
CGCCCTGCACACATGTATCAGAATGATGTTTCTCGTTTGGATTATCTAGT
TTTCCACAAAACACGCAATGCCGAGCAAGGAATTCTCGAGTGCGCCGTCT
CTCCCTGTTCCGTGAGTCGTCGTAAGGGTCAAGGCACCCCCTCCGGAACA
GGTTACCGTGGTATGCCAATACCTCCCCACTCAACCGCAGACCAGACCGG
GGTAGGTTCCCGCTTCCTCACAGCCGGGGATCAACTTGACCGTTCGTGTA
GAACCCATGTACCAGACATCTCCGAAGTCTTCCGGCACAGCACAAGTCTC
TCTGCCTCCCTCCGCAGCAAAGCAACATAACTTCCTTTCTTTCCCTTCGT
CTTAGAAATCATCCATACAAACACATCAAGAGACTTGCCCGCCAGAGAGC
AGTCGAAGGGGGGGGGAGGGGGGGCGTACTCTTACGCTTTGCATGCCTTT
AGCGGTTACACCATTGACCAAACGTCCTCGAGAGGGACGGAGCATCGAAC
GGGGGGGGGGGCGTACTCTTATGTTTTGCATGCCTTAGCGGTTAGACCAT
TGACCACGCGTCCTCGAGAGGACGGAGCATTGTTCCCACAGGACCGATCA
CCGATGGCCAATAGCTCCTTCCTAGCATCGAAGGGGGAGTGTTGAAGTGA
ATGTCTCTACAACAAGCTAACAACCACACTCGTTTGCGCGATTTACGAAT
CCCCTGCAGAACCGGCGGAGGAGAGCGGGGGGGTGCAAGACCCCTACAGC
GATGCCAGCGCCAAGTACGGACCGCTCAAGCTGCCCGAGCTGCAGAACGT
GGACCTCAGCAAGATGTACGGCGGGGCAGCTCAAGTGAGTTTTTTCTTTT
TTTTCCACGACACAAGAAAATGACCTCGTCCACAGATGAAGAGTCTTGGA
AGAGATGAGCACTGAAATACTTGCTCGCGTTTTTTTTCAATAGCTTCTTT
GGTACGACAACCAACAACATTAATTTCCCCACAGGTACAAGACTTAAAGG
ATAGACGAGCAATGAAGGACATATAGCGTATTGCTTCTACATCGTGCACA
GAGGTCGAACAGAGTGAAAGTCAACAAAATATCGATCGGAGAGAACGTCT
GAGGCTTTATTGTGCCGAAGGACTGGGGCCGCGTAGCAGGACAACTCTGC
TTTGTCTACCCACGCGCCCCCCCCCCACTTGGCCGGCAGGGTGTTGGTGT
CAGTGGCGTGACGTCCTCGCTTTGCTCTTGATACGTGGCATCTGCCAACA
CGTAACAGCTTGATGCACTGCTTTGCAGGTATCCCCAAGAACATACGACA
CCCGCACAGTGCCAATGCTATTGTTGGGCAACAAAAAGTAAATGAGACAA
CGCGGCTCACCCCCTGCTCGAAAGCTCTCTCTTGCCAGGCGATGAGCACG
CCCGCACGGGGACGATGTTGCATGTATAGCCGGTCACGCCGGCTCCACGA
TGTAGCGTCCACGTAAGCCTCAATATTAATTTCGTTCGTCTTGGCCTCCT
GGCTGCTCCTGCGTGCCACCCCACCGCAAAACTGGACCACCTCCGACATC
ACCAACCACAAATCGTGGTCGGAACTACCGCTCCCAAGGGGAAGGAGCCA
GAGTACCTGGACTACAACATCAAGGGGAGGGGCTTCTGGGAACGGATGCC
TTACAACGCCGGGGCGCTTTATATAACCGGTGAGTGAGGTAGAGGAGGAC
GGGAGGAAGACCTGTGCGCGATGCAGACAAAGGGCGCGTAGACTTTGCAG
CTTTACCGCCGGGGCGCTTTATATAACCGGTGAGGAGGAACGGGAGGAAG
TGCGCGATGCAGACAAAGGGCGCGTAGACTTTGCAGCTTTACCGCCGGGG
CGCTCTAAACGACCGGTGAGTGAGGTAGAGGAGGACGGGAGGAAGACCTG
TGCGCGATGCAGACAAAGGGCGCGTACACTTTGTAGCATTAACGCAGGGG
CGCTTTAAATGACCGGTTGAGTGAGGTAGAGGAGGACGGGAGGAAGACCT
TTGCACGATGCAGACAAAGGACGCGTACACTTTAGCTTTACGTATCCGGC
CAGGAACAGGACGCGAGAGTAATCGTGTACGATGCAGACAAAGGGCGCGC
GCGCAGCTTTGCATAAGCGGTGAATTAGATGGAGGAAGAGGAGGAGAGGA
TGACCGTGCACGACGCGGACGAAGGGCGTGGAGACCGAAGTGTCCAACAT
GACCAGTCGGCAGAGCGAGAGTGGTCGCAGGGTGGCACAAGTTGAAGGAG
ATCAGAGCTTTGTGGCCCTGTAGACGGACCAGCGGGTTTAGTAGAAAGTT
GGAGGTAATAGTGCAGAAGAGCAAGGCATCCGTGTAGCATACACGAAGTG
AGAGGTCGCGGGATCAAACCAGACAACACCACAGAAGGAGCAAGCAACTT
CCTACTGCTTGTTTTCTGTCTCTCGATTTGTATATTTTACCATTTGGGGA
ATCTTGAGCTCTCTTCGACTCAATACTGTGTGGTAGGTGTGTTTGTACTT
GTTTTTGGTGTTGGTCGTTTTAATTTCGGTGTTTGGGGACGCAATATATA
TCCTTTTCTGCACATTTTTTTTTGTGGCCCGTCCAAATCCCGCACGTTCG
AGAATTAAAACGGTGCAAACCTTAAATGAGGAGGAATGGTCTCGGTCGGT
GCCTTGTCGTTGCTTCCCCGGGTGCTAGTGTGCTTGCGTGAGGTTGGTGA
TGACGTCTGAATTTCATCATCTCCTCCCCGTAAGCTGCCATCCTGTCCTT
GCTTAGCAAGTACCCCCCGACCGCCCCCTATTGTGCGTGCTCGGTCCAAT
CTTCCCCATTGTGTGCTTGGCTTTCAGGGATCTTGGGAGGCGGAGCGGCG
GGCGTACGGGAGGGGTTCGCGAAGGCGCCCAACCGGAGATCTCGGGTCCT
TCTGAACAGCATCATGAACCACGCTGGCAAGAAAGGCTCCTTCTACGGCA
ACACCTTTGCGGTCCTCGGTGAGTGAGTCGACAGGCAGGTTACCGGTAAG
GGCCATGTACATTTGCTGCCCTCCGTCGTGCGGGGACCAACGTTTTTGGC
GCGTCTGCAGTGTTTGGTGATGGGCTACCGCCGTGACGCGCACCTCTGGT
TGTGCTTGGCCGATGGTGCAAGGGTGAGTGCAACACGCCTCCTCCGACTA
GGTCGAATTATTGTCTTCCCCTTGCCGCCAACGATACAGTGTAGAGCAGC
ACCTTGTAACGGCGTGCGAGGGGGGCACGTGTTAAGCTTCGTTCCGTATG
CAGGTGGCCCGCATTGAGCAAGTCAAGGGATAGAGTAAAAAGGTGGAATA
GCAACAAAACAAAGAGAGCGGCAGTGAGGAGACACTGCCAAGGTTGCGGT
GGATTTTTTTGCACGCTGTACCGATGGGCAGCAGGCAGGGCGGGCGGTGC
CACAGGTGGTCCGCCCGCTCATGCCAACAACTGCAAAACCCGTACCATGT
ATGTGTATCCACCAGTGGTCTCCCGGAACGCCTTTTTTTTGTGCCGGATT
TTCCTACAACAACGCATGTGGTACAATATACGCATGGAACCTACGAATGC
TTCGAAGACCCCTGTCACCTACAGCACATGCATGCATATTTTCCCCACTT
GGAGAATAACTACGAATGGTAGAACGGATGTCACCCAGCACGAAGAGGAC
GTTGTACGGTAGTTTTTGTTGTTGTTGACAATTTTTTCGGCGCGAAGGGA
CGGAAACACATCCGGCTGGCTATATTAGTCCTTTCGTCGAAGACTTCGTA
CGGAATTGGACCGTATTTGTACATCCCTCTTTCGTCATTCCGTAGTGGTA
CGTTTTTTTTTTTTTCGTCGAAATGGTTTCATCCTCGGACCTCTCTCTCT
CACAACCGCCCCCCGTCCCCCTCTCGCTACCGCCGCAGCAACGTACTACA
CTTGCGCGGAGACCCTGTTGGACCACTTTGAGGTGGATCAGATGGGACCG
GTCCAGCAAGCGGGGCTGGGAGAGATCATCAACCCGTTGCTGGCGGGCGC
GTCGACCGGCCTCCTGTACAAGAGCTCCGGTAAGATAACTTGCGTCTTCC
CGTTGCTGGCGTTACAGCAGTAGTAAGGGTCGATATCATTAGCGTTCCGT
GGTGGTGGTGGTGGTGGTGGTGGTGGTGCTGACAGAAGTCTCTGCTGCGG
TGGCAGGCATATATGGGCTTGGAGTTTGTGATGTGCTTTTGATGAAATTG
GCGAAAATAAAACATGTTGGAAAGGTATCGTAGCATTTTCGCCTTCCAAA
GTGAGGATGGTTGCGGGGGGGGGGGGTTCCGCACAGAGAAAATTCGCCGG
CTGTAGGTCCATCCTCGCAACTGGCACACCGCGGGCTACTGTTCCCATTG
CGCGTTGGTATTTGCAGCACCGTCATGTTCTCGAGTCGCGTTTCGCCGAA
ATACCCGACCTTTCGCCTGCTTCTCGCGTGTCTTTCTTTTTATGGCTTGT
GCAGCGGGGCCAAGATTGGCGTTGATGGCTTCCGTGGCGGGGCTTGGGGC
TGTTGGGGTTGCCTACGCGGTGGACAAGACCTCGGCGTCGGTGCTAGGAC
AGGGCATCATTTTCTAGACATGATGGGCAATGTATTCTTGTTTTGTGTAG
GGAAGGACCGTGCGTCTCCGGTTCTTTTGAGATTTAATTCTCCGTTCCTT
TCGTTTTTTCGTGGGAAGGGCATGTCTTGGCGCGTTGCCTTCTTGAGGGG
TATAAATAAACTGTCTTTGTTCTTGGTCTAGGCAGGCCACTGCTGTGTTT
GATTTGGAACGGTGTATTCCCTTCGACATGTTTTGCCCCCCTCCGTTTGG
TGCCGTCCCCCTTGAGTAGCCGCGTTTTTTCCTTTTGCCCAACAGTTGGG
CATTGAGGGGTATTCGTAATCGCGGTGGCGTGGACCTCAGTTGTCCAACC
AAAATGCTCTGACAGGAAAGTAACGTTTTTTAACTGGAAACAACACAACA
ATCTGGCTTCGTTTCGCTTCGCCTTTCCTTGCCAGTCGTCTTTATATTCG
GATTCGATTCTCTTTTGCGCAGCACCAAACGATCCATCCTCCGACAAACA
AGCCTCTGCCCCTTTCATTTTCACTTTTACAGTGCGCCCGCCTATAGTAG
TGTGAAACTTGAATCTGGGTTTTTATGATTGTGCGAGTGATACGGGTATG
ATCACCGTGGCTTGAGCTGGGCTTCAATAGTGAGCAGATCCGTTACCTCT
GTGCCTGACGACAGCTCGCCCAGCAACCTGATATATTTTGACGACCCTCA
AGCACCCCGTCTTGTGGTAGCTCCCAAGCACTCGAGGCCGGCGCAAGGAA
AAAGTTGCACGCGAGCGCTTATATCAGTATCGACAGCGCGCGACGAACAT
GTATATGTGTGTCTTTAGGATTAGCATCGACCGCGCTAGCCGGCTGACCG
ATGAAAAGACGTCAGTCATAGTGTGGGGTGCGTGTGCGTTCGTCCCGTTC
TAGCGCCAATCTACGCATGTCATATGTCGGAGGAAGTATATCTTTGACGA
AACAGTCGGGGCCTGCGGTGGGAAACACGTGTCCTGCTGGTGTGGTGTTT
GGTGTGTCGTCGTCGTGGTTTTGTTGTGGCTGTGAGGTGCGGGGGGTTCG
ATCCCCCCCCGAATGAAAGACCGATATCGATGAGGAGACTGAAACACTTT
GTGCCAGCCGAACAATTCCAGGGTACAAATCTTGATGGGAGTATCCACCT
CGCTCACATTCGCCTCTATACCCCCTTGCCGCCAACTACTCACCAATGTG
TCCTTTGCCAATATAGTCGAATCCGGCTCCGGACAGCGTTCGTTCTGTGG
AGGGGACAAGCGCTTGGTCATGTCCCGGGCTTGTGTCCTCGAGAATAAAA
CCAGCTCTGCTCCCGCAAGACGTATGCAGCTTTGGCGGACATACACCACG
AGGGACACCACTACTATTATTGACACTTACTTGGGGAGACCATCCTCATA
CAAACGCAAGTCAGGGGGGACCAAATACTGCATATAATAATAGTGAGTAG
CTTTCACCTACGGAATGTTCGAATGCGCCGCGGAGTGCCTGTGGCGTCTC
CGTCATAGCAACGGTGCACCGACAAAAACCCGACAAAAGCCCTTGGCAAA
ACGCAACAGAGGAGCAGGGGCGACGCAGGTTGGAGACCACCCCCCTCTCT
CCGCACCAGGCCCAGCTCTCAAGCCTCGTCTGTGCCCGTTACTCGCGCAT
GGATGGGGTGAAAAAAAAGAGATGCGAAACCTCAAATACCCCCAAAATAA
CCTGGGCCGCAGAGCGGAGACCGGGGGGCCCGACGGCGTGAACCACGGCA
TGCGCTACCGGAACATCTAAGCGGGCCTCATGTACGACAACCAAGAGAAC
ACCCGATACGCGAGAAAGAAGTTGGCTCAGATGCCGCTGCCAGATCATCG
ACATGATGAACAACCTCCAACAAACGGGGCTCCCGGCATATCATGGACAT
GATGATGACGACGTTCCAACAAAAGGCACCCTCTCAAAGAGAACAGGATT
AAGCCGAATCCCCTAGGTGAACCAAAAAAAGCAAACGGACGACTGGTTGC
ACAGCAACAAACGAAGCAGCCGACCAATGATGGAAAGCTCCCAAAAACAA
CCCGCCAGATCGCTCAATAATACTTGAATTAGCTACTTCACACACGGCTT
CGGAGAGACAAGAGACAAGTGAACAACCAGCTGAGCAAAAAATAATAAAA
AAGAGCCAAGACAAAGAAAGCTCTTGACCTATCGTCATGTTGCGATGCCC
CTCCTCTCTCGAAGGCGGGATTACACGCATGTGAAATGTCTATTCGCCAA
AAGCACCAGCAGCCAGCCGAAGGCAAAGCACACCTGCGAACTGTAGCTGC
ATCCTACACATCTGTGAACACCCCGCTGCATCCCCACCCACATGCACACA
CATCCCACCGCCACCGCACGGCACATGCAGAGCCACACGTAACAAAAGTG
GGAGATTTAGAACTCCAGGCCCAAAGACAGAAAATAGTCAAGAACTTGAC
CAACGACCAGTTTTCCACCCGAGAAAAATCCCACAGCAATAAAACCTGAC
ACTCTAGCCGCTGTGTTAGTTTCTAGTCTACAGAGGAAAAAAGAGACAAC
GAGCCTCGGGTAAAATGACACGGATAAATGTAGCGCATGATCCCTCCCGG
CTCTTGTCCATCCCAGCTCGCCAACGCCCACCACCTCCCGCTACGTCCTC
TCGAGCACGCGCAACCAATGGTCGAAGGCAAGCAAAACACGAGTACGCCC
CCCTGCCACCAATACCACTATGGCTATCACCGCACATCCAAAGCCCCGAG
ACCCATTCCTCCTCGCTACGGGGAACGGAACACTACAGTCGACATCAGGG
ACAAAAAATAGCACAACCCCTGTACCGAGCGCTTACCCTGCGGCAGAACA
CACCACATACACTCACAGATTTGACCAGACAATTTAACATTTTCACTTTT
TTTGTGTACGACAAAACGGGGTGAGAGATACGGTGCCCGTTCCATTGTGT
AGCCGTGGCCGACACCCTACCCATCCGCCCTCTGCGGTGCCCCACAACGA
GGCCGTCGTTGCCGCACACCGAACCCTAGTAGAATACGAAACATGTTTAA
TATGTTTCTAGCACTTGAACCACGTGCGGAACAAACCAGACAAACAAGAA
AAAAACCAAACGAACAAGAGGGCCATCACGGCCCGGACATATCATGGGAC
ACTCAAACACGAACGAACACAAAACCTTTTTCAGGCTGCTGCACAGCAAA
CGGGTGCATCGTTCCCGAGTTCCCAGTTATTCTACCGACAACATACTACT
ATTGTTGCACTAAGAGTATGGTTCTCTAACATCGCGCGACGCTGATACAC
CCCGCGGGCTGCTGGACAGCAAAGCGCACACACTGTCCCCGTACTCCTAC
ACGAACTAATCCTGTCGCACCGGGCGTTCCAAATCAGTCTTCCCGTTCCG
AATCGTCCTCCCCGCCCGCCACCCCATTCTCCTCCCCCTCTCCGGCCGCC
ACGGCCTTCTCGGCTTCGTCCTCTTCACGCTGACTCTCGTCGTCATCTTC
CTCCTCGTCGTCGTCGTCATCATCATCATCGCCGATAAGCGGCGGCGGGT
CCCTCCAAAAATTGAGGTCGGTGAATCTGTCCTCGACGGCGGCGCGGTTG
GGGTAGAAGCTCTTCTCCCGCCGCGGCGCCACCTCCTCCCACCTCCGCGG
AATCGTCGGGGGCCCCTTCGCCTTGGAACTCGCCGCCTCCTTCCCTCCGA
TTCCGCCGACGCCGCCGCCGCTGCCACCGCTGTCGGCCAGGGAAGGGCGG
CGGCTAGCCTGACCTTTGCTCTTGCTCCCGTCGCCGCGTTCGCCTCCAAG
CGCTGGGACAAATCCGTTGATGTCTCGGCCGTCGGTTTCGGCGGCCACGG
ATGCACCGATAGCGGGGGACACGCCTCCGCCGCCACCGCCGCCACCGCCG
CCGCCATCTGGACCGTCAGCACCGTCACCAGCCCCGCCGGGTCCGCCTCC
GCCGCCTGCAACGGAAGAAGAC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig83:565221..574742+

>mRNA_Ecto-sp6_S_contig83.17543.1 ID=mRNA_Ecto-sp6_S_contig83.17543.1|Name=mRNA_Ecto-sp6_S_contig83.17543.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:565221..574742+ (Ectocarpus species6 EcLAC_371)
ATGGCATCAGAACCGGCGGAGGAGAGCGGGGGGGTGCAAGACCCCTACAG
CGATGCCAGCGCCAAGTACGGACCGCTCAAGCTGCCCGAGCTGCAGAACG
TGGACCTCAGCAAGATGTACGGCGGGGCAGCTCAAGGGAAGGAGCCAGAG
TACCTGGACTACAACATCAAGGGGAGGGGCTTCTGGGAACGGATGCCTTA
CAACGCCGGGGCGCTTTATATAACCGGGATCTTGGGAGGCGGAGCGGCGG
GCGTACGGGAGGGGTTCGCGAAGGCGCCCAACCGGAGATCTCGGGTCCTT
CTGAACAGCATCATGAACCACGCTGGCAAGAAAGGCTCCTTCTACGGCAA
CACCTTTGCGGTCCTCGCAACGTACTACACTTGCGCGGAGACCCTGTTGG
ACCACTTTGAGGTGGATCAGATGGGACCGGTCCAGCAAGCGGGGCTGGGA
GAGATCATCAACCCGTTGCTGGCGGGCGCGTCGACCGGCCTCCTGTACAA
GAGCTCCGCGGGGCCAAGATTGGCGTTGATGGCTTCCGTGGCGGGGCTTG
GGGCTGTTGGGGTTGCCTACGCGGTGGACAAGACCTCGGCGTCGGTGCTA
GGACAGGGCATCATTTTCTAG
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