prot_Ecto-sp6_S_contig82.17427.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig82.17427.1
Unique Nameprot_Ecto-sp6_S_contig82.17427.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length280
Homology
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BLAST of mRNA_Ecto-sp6_S_contig82.17427.1 vs. uniprot
Match: D7G437_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G437_ECTSI)

HSP 1 Score: 557 bits (1436), Expect = 1.220e-200
Identity = 268/279 (96.06%), Postives = 273/279 (97.85%), Query Frame = 0 
Query:    1 MGCSGSRQQPASPTRRNRYDEFAALITDPLRGPTKADISFIETCTPRALEPKDKDATKLPLLVLAKDHDEWFRCLSKRCDPGVTWKQDGDGTSLGVELMGHRLYDDWCEAMARWDARHATTDSTGVRPLDSPQRNDWWSLGDYGGVSVALGLSVIATASLGCPLVYVGPVIWTVIKAWRESFKRCRPSHKLTKIFSTHETIVGSVLKELDTRIKAAEEVAKANPGHRPSIEKSARQRTRMDGLRMLLENDTRVGAATRCVVDHGVIDYYPPPPPEIRES 279
            MGCSGSRQQPASPTRRNRYDEF ALITDPL+GPTKADISFIETCTPRALEPKDKDATKLPLLVLAKDHDEWFRCLSKRC+PGVTWKQDG+ TSLGVELMGHRLYDDWCEAMARWDARHATT+STGVRPLDS QRNDWWS+GDYGGVSVALGLSVIATASLGCPLVYVGPVIWTVIKAWRESFKRCRPSHKLTKIFSTHETIVGSVLKELDTRIKAAEEVAKANPGHRPSIEKSARQR RMDGLRMLLENDTRVGAATRCVVDHGVID YPP PPEIRES
Sbjct:    1 MGCSGSRQQPASPTRRNRYDEFGALITDPLKGPTKADISFIETCTPRALEPKDKDATKLPLLVLAKDHDEWFRCLSKRCNPGVTWKQDGNTTSLGVELMGHRLYDDWCEAMARWDARHATTNSTGVRPLDSSQRNDWWSIGDYGGVSVALGLSVIATASLGCPLVYVGPVIWTVIKAWRESFKRCRPSHKLTKIFSTHETIVGSVLKELDTRIKAAEEVAKANPGHRPSIEKSARQRNRMDGLRMLLENDTRVGAATRCVVDHGVIDDYPPLPPEIRES 279
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BLAST of mRNA_Ecto-sp6_S_contig82.17427.1 vs. uniprot
Match: A0A6H5LA16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA16_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 1.780e-87
Identity = 139/214 (64.95%), Postives = 149/214 (69.63%), Query Frame = 0 
Query:   72 FRCLSKRCDPGVTWKQDGDGTSLGVELMGHRLYDDWCEAMARWDARHATT------DSTGVRPLDSPQRNDWWSLGDYGGVSVALGLSVIATASLGCPLVYVGPVIWTVIKAWRESFKRCRPSHKLTKIFSTHETIVGSVLKELDTRIKAAEEVAKANPGHRPSIEKSARQRTRMDGLRMLLENDTRVGAATRCVVDHGVIDYYPPPPPEIRES 279
             +CLSKRCDP VTWKQDG+ T LGVELMGHRL+DDWCEA   WDARHATT      DSTG+RPLD PQRN WWS G+YGGVSVALGLS IATASLGCPLVYVGPVIWT                                         AAEEVAKANPGHRPS E+S RQR R+DGLR+LL N+TRVGAATRCV+DHGVI  YPPP PEIRES
Sbjct:    1 MQCLSKRCDPWVTWKQDGEKTDLGVELMGHRLFDDWCEATKHWDARHATTARHAATDSTGLRPLDLPQRNGWWSRGEYGGVSVALGLSAIATASLGCPLVYVGPVIWT-----------------------------------------AAEEVAKANPGHRPSEEQSDRQRFRVDGLRVLLVNETRVGAATRCVMDHGVIADYPPPLPEIRES 173
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17427.1 vs. uniprot
Match: A0A6H5L261_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L261_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.010e-34
Identity = 60/73 (82.19%), Postives = 64/73 (87.67%), Query Frame = 0 
Query:    1 MGCSGSRQQPASPTRRNRYDEFAALITDPLRGPTKADISFIETCTPRALEPKDKDATKLPLLVLAKDHDEWFR 73
            MGC  SRQ+PA PTRRNRY E AALITDP+RGPT  DI+FIETC+PRALEP DKDAT LPLLVLAKDHDEWFR
Sbjct:    1 MGCCDSRQRPAPPTRRNRYIEIAALITDPVRGPTTEDINFIETCSPRALEPTDKDATNLPLLVLAKDHDEWFR 73
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G437_ECTSI1.220e-20096.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LA16_9PHAE1.780e-8764.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L261_9PHAE1.010e-3482.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:348333..350836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17427.1mRNA_Ecto-sp6_S_contig82.17427.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig82 348333..350836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17427.1 ID=prot_Ecto-sp6_S_contig82.17427.1|Name=mRNA_Ecto-sp6_S_contig82.17427.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=280bp
MGCSGSRQQPASPTRRNRYDEFAALITDPLRGPTKADISFIETCTPRALE
PKDKDATKLPLLVLAKDHDEWFRCLSKRCDPGVTWKQDGDGTSLGVELMG
HRLYDDWCEAMARWDARHATTDSTGVRPLDSPQRNDWWSLGDYGGVSVAL
GLSVIATASLGCPLVYVGPVIWTVIKAWRESFKRCRPSHKLTKIFSTHET
IVGSVLKELDTRIKAAEEVAKANPGHRPSIEKSARQRTRMDGLRMLLEND
TRVGAATRCVVDHGVIDYYPPPPPEIRES*
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