prot_Ecto-sp6_S_contig110.1467.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig110.1467.1
Unique Nameprot_Ecto-sp6_S_contig110.1467.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length250
Homology
BLAST of mRNA_Ecto-sp6_S_contig110.1467.1 vs. uniprot
Match: D7G4J1_ECTSI (Smr domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4J1_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 9.560e-160
Identity = 227/248 (91.53%), Postives = 234/248 (94.35%), Query Frame = 0
Query:    1 MIEAHLTDHPFDDMACQDYEDESNHVFARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETEGDGDGD----VEWPKWPLKVGRTGVAVLELHDLTQGIALETVQVALLDVIRRPLRRPYWSGDKRWRIVTGMGNNSKDKEAVIKPAVVELLEDLGLRPEFQQRNEGCVELKPASLEAYIRRMKRGGAAA 244
            MIEAHLTDHPFDDMACQDYEDESNHVFARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETEG+        VEWPKWPLKVGRTG A+LELHDLTQGIALETVQVALLDVIRRPLRRPYWSGDKRWRI+TGMGNNSKD+EA+IKPAVVELLEDLGLRPEFQQRNEGCVELKPA+LEAYIRR     +AA
Sbjct:   52 MIEAHLTDHPFDDMACQDYEDESNHVFARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETEGNXXXXXXXXVEWPKWPLKVGRTGGAILELHDLTQGIALETVQVALLDVIRRPLRRPYWSGDKRWRIITGMGNNSKDREAIIKPAVVELLEDLGLRPEFQQRNEGCVELKPANLEAYIRRQVTKASAA 299          
BLAST of mRNA_Ecto-sp6_S_contig110.1467.1 vs. uniprot
Match: D7G4I1_ECTSI (Predicted mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I1_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 2.290e-32
Identity = 77/204 (37.75%), Postives = 114/204 (55.88%), Query Frame = 0
Query:   34 VAGMQADAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETEGDGDGD-VEWPKWPLKVGRTGVAVLELHDLTQGIALETVQVALLDVIRRPLRRPYWSGDKRWRIVTGMGNNSKDKEAVIKPAVVELLEDLGLRPEFQQRNEGCVELKPASLEAYIRR 236
            +A M     I+P   TYRA++ L   E  W+ ++LL+EH +R+      F +D + + + K G+ E++TM++E               D  GD +E      ++       L+LH+ T   AL  V+V LLD+ R+P  R +    +   I+TGMGNNSKD EAVIKP V+ELL D+GL P   + NEGC+ L+PA L+AY+ R
Sbjct:  246 LAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFE---------------DALGDKIE------ELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPATRTFHDPAQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLQAYMAR 428          
BLAST of mRNA_Ecto-sp6_S_contig110.1467.1 vs. uniprot
Match: A0A835YUL6_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUL6_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.660e-17
Identity = 67/225 (29.78%), Postives = 112/225 (49.78%), Query Frame = 0
Query:   43 IKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETEGDGDGDVE-WPKWPLKVGRTGVAVLELHDLTQGIALETVQVALLDVIRRPLRRPYWSGDKRWRIVTGMGNNSKDKEAVIKPAVVELLE-DLGLRPEF----------------QQRNEGCVELKPASLEAYIRRMKRGGAAAASTPP 249
            ++P+  TYRA++ +C  +  W  ++LLLEH R    +   F ++ + T +  +G  +++ ++YE       R+L      G+G  E W +   KV        +LH  T   A   V+ AL D++R+P  RP+        I+TG+G  S++  AVIKPA++++L  +L +  E                 Q+ N GCVE++P  L+A+ R   R  A  A+T P
Sbjct:  139 LEPDVDTYRAVMGMCTKDRLWHLSLLLLEHMRLRGVQPGKFIYNEICTVLDMEGKHDLAEIVYE-------RSL------GEGVFEPWIEDDNKV--------DLHSFTLNTARAAVRSALTDMLRQPSGRPFHDPAAPMHIITGVGRRSEEGVAVIKPAILDMLNVELQIPAEXXXXXXXXXXXXXXXXVQKHNPGCVEIQPQHLQAWARA--RLAAVGATTDP 340          
BLAST of mRNA_Ecto-sp6_S_contig110.1467.1 vs. uniprot
Match: A0A812I2Z0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812I2Z0_9DINO)

HSP 1 Score: 57.4 bits (137), Expect = 7.260e-6
Identity = 57/216 (26.39%), Postives = 98/216 (45.37%), Query Frame = 0
Query:   47 NGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETE------------GDGDGDVEW----PKWPLKVGRTGVAV-----------LELHDLTQGIALETVQVALLDVIR-RPLRRPYWSGDKRWRIVTGMGNNSKDKEAVIKPAVVELLEDLGLRPEFQQRNEGCVELKPASLEAYI 234
            +GT+ AL ++ +   SW++ + +LE +  +  +L+  +  ++++   K    +   +L  LG+++A   +L+              GD    + W    P   L++G                 L+LH L    A   V  ALLD    +P   P W       +VTG GN+S+  E+V++PAV++LL++LGL       NEG V L    L  +I
Sbjct:  322 DGTFNALCRVFEHNSSWQSCLQILEEASLAGPQLSQLTLSVVVSACQKS--TKWHQVLQLLGMMEASGMVLDDVFQAAGMTSHVYMGDLATALAWYRERPLRGLRLGGRKAGAGWFEHGRRWGHLDLHGLQPEEARLAVCCALLDATMVKPGMLPSWG----LVLVTGRGNHSEG-ESVVRPAVLQLLKELGLAARVDPYNEGRVVLPARELLTFI 530          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G4J1_ECTSI9.560e-16091.53Smr domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G4I1_ECTSI2.290e-3237.75Predicted mitochondrial protein n=2 Tax=Ectocarpus... [more]
A0A835YUL6_9STRA5.660e-1729.78Smr domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A812I2Z0_9DINO7.260e-626.39Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 13..119
e-value: 7.5E-8
score: 34.1
NoneNo IPR availableGENE3D3.30.1370.110coord: 136..226
e-value: 3.3E-10
score: 41.8
IPR002625Smr domainPROSITEPS50828SMRcoord: 144..228
score: 13.535
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 143..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig110contigEcto-sp6_S_contig110:112373..117002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig110.1467.1mRNA_Ecto-sp6_S_contig110.1467.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig110 109919..117002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig110.1467.1 ID=prot_Ecto-sp6_S_contig110.1467.1|Name=mRNA_Ecto-sp6_S_contig110.1467.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=250bp
MIEAHLTDHPFDDMACQDYEDESNHVFARACGIVAGMQADAGIKPNNGTY
RALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEV
STMLYELGVVDADRALLETEGDGDGDVEWPKWPLKVGRTGVAVLELHDLT
QGIALETVQVALLDVIRRPLRRPYWSGDKRWRIVTGMGNNSKDKEAVIKP
AVVELLEDLGLRPEFQQRNEGCVELKPASLEAYIRRMKRGGAAAASTPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002625Smr_dom
IPR036063Smr_dom_sf