mRNA_Ecto-sp6_S_contig11.1277.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig11.1277.1
Unique NamemRNA_Ecto-sp6_S_contig11.1277.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: D8LAX5_ECTSI (Nfu_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX5_ECTSI)

HSP 1 Score: 540 bits (1391), Expect = 1.030e-185
Identity = 276/282 (97.87%), Postives = 278/282 (98.58%), Query Frame = 3 
Query:  108 LSRTAAESLGTQARPALGGAAAQTRRFQVAASSAGTLSAVTERPLLGRNHPRSRSPWLSQQSRSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVPFEP 953
            +SRTAAESLGTQARPALGGAAAQTRRFQVAASSA T SA TERPLLGRNHPRSRSPWLSQQSRSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGV GVFLGTDFITISK+DEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVPFEP
Sbjct:    1 MSRTAAESLGTQARPALGGAAAQTRRFQVAASSASTSSAATERPLLGRNHPRSRSPWLSQQSRSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVAGVFLGTDFITISKHDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVPFEP 282
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BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: A0A1V9Y986_9STRA (Iron-sulfur cluster scaffold protein Nfu-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y986_9STRA)

HSP 1 Score: 283 bits (725), Expect = 2.540e-86
Identity = 140/218 (64.22%), Postives = 167/218 (76.61%), Query Frame = 3 
Query:  291 SRSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVP 944
            +RS FIQTE TPNP+S+KFLPGR VL     TGV FTP   E  QS LA  L ++ GVT VF G DFI+++K ++  W L++  +F  IMDF+A GKPVM  +P++TDTTILDDDDEVVAMIKELL+ R+RPAVQ+DGGDIFY+GFD  TG V VQLAGSC GCPSS+VTLKNGVE MLMHYIPEV  +    DEEL +VN+KE   LE RL+AAG+P
Sbjct:   48 ARSMFIQTENTPNPHSIKFLPGRAVLDERFTTGVDFTPKSPEVRQSLLAKELFTIHGVTRVFFGKDFISVTKTEDEDWDLLRGQIFATIMDFYASGKPVMSDKPIITDTTILDDDDEVVAMIKELLETRIRPAVQDDGGDIFYKGFDEETGIVTVQLAGSCAGCPSSSVTLKNGVENMLMHYIPEVRGIKEFVDEELNEVNEKEFQSLEARLRAAGIP 265
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BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: A0A1V9Y8Q5_9STRA (Iron-sulfur cluster scaffold protein Nfu n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8Q5_9STRA)

HSP 1 Score: 281 bits (720), Expect = 6.010e-85
Identity = 141/218 (64.68%), Postives = 169/218 (77.52%), Query Frame = 3 
Query:  291 SRSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVP 944
            SRS FIQTE TPNP+S+KFLPGRPVL     TGV FTP   E  QS LA  L  ++GV  VF G DF++I+K+++  W +++  +F  IMDF+A GKPVML +P +TDTTILDDDDEVVAMIKELL+ R+RPAVQ+DGGDIFY+GFD  TG V VQLAGSCVGC SS+VTLKNGVE MLMHYIPEVT V  V+D  LK +N+ E   LE+RL+AAG+P
Sbjct:   94 SRSMFIQTESTPNPHSIKFLPGRPVLDERFTTGVDFTPKAPEVRQSELARELFKIDGVNRVFFGKDFVSITKDEDEDWEMLRGQIFATIMDFYATGKPVMLDKPEITDTTILDDDDEVVAMIKELLETRIRPAVQDDGGDIFYKGFDEETGIVKVQLAGSCVGCASSSVTLKNGVENMLMHYIPEVTGVEEVDDG-LKDINENEFKTLEERLRAAGIP 310
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BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: A0A6G0W9T7_9STRA (Nfu_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9T7_9STRA)

HSP 1 Score: 278 bits (711), Expect = 3.730e-84
Identity = 140/229 (61.14%), Postives = 170/229 (74.24%), Query Frame = 3 
Query:  261 RSRSPWLSQQS--RSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGV 941
            +SR P L      R+ FIQTE TPNP SLKFLPGR VL     TGV FTP   E  +S LA  L ++ GV  VF G DFI+I+K+D+  W +++  +FG IMD++A GKP+M  E V+TDTTILDDDDEVVAMIKELL+ R+RPAVQ+DGGDI+YRGFD  TG V +QLAGSC GCPSS++TLKNGVE MLMHYIPEV  +  VEDEELK +N KE   LE++L+ AG+
Sbjct:   44 KSRRPSLFSVGAVRTMFIQTETTPNPQSLKFLPGRLVLDERFTTGVDFTPKGPELRRSLLAKDLFAISGVVRVFFGKDFISITKHDDEDWDVLRGQIFGTIMDYYASGKPIMTDEEVITDTTILDDDDEVVAMIKELLETRIRPAVQDDGGDIYYRGFDETTGIVKLQLAGSCAGCPSSSITLKNGVENMLMHYIPEVRGIQEVEDEELKDINNKEFQTLEEKLRKAGI 272
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BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: A0A2D4C4T2_PYTIN (Iron-sulfur cluster scaffold protein Nfu-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4T2_PYTIN)

HSP 1 Score: 276 bits (706), Expect = 2.150e-83
Identity = 142/253 (56.13%), Postives = 179/253 (70.75%), Query Frame = 3 
Query:  192 VAASSAGTLSAVTERPLLGRN-HPRSRSPWLSQQS--RSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGV 941
            VAAS+    +     PL GR    RS SP+ +     R+ FIQTEPTPNP+S+KFLPGR VL     TGV FTP   E  +S LA  L  ++GVT VF G DF++++KN++  W  ++  +F  IMDF+A G+ +M  EP+VTDTTIL DDDEVVAMIKELL+ R+RP+VQEDGGDIFY+GFD  +G V +QLAGSC GCPSS+VTLKNGVE ML HYIPEV  +  V+D+EL  +N+ E    ED+L+AAGV
Sbjct:   22 VAASTRALSTRSPLHPLAGRAVAARSSSPFAAAAGAQRTMFIQTEPTPNPHSIKFLPGREVLDERFTTGVDFTPGSEEVRRSTLAKKLFQIDGVTRVFFGKDFVSVTKNEDEDWDALRSEIFATIMDFYATGEQIMSDEPIVTDTTILPDDDEVVAMIKELLETRIRPSVQEDGGDIFYKGFDEXSGIVKLQLAGSCAGCPSSSVTLKNGVENMLKHYIPEVRGIEEVQDDELNAINENEFKSFEDKLRAAGV 274
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BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: A0A067CVC8_SAPPC (Nfu_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVC8_SAPPC)

HSP 1 Score: 275 bits (702), Expect = 7.260e-83
Identity = 139/222 (62.61%), Postives = 167/222 (75.23%), Query Frame = 3 
Query:  291 SRSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFY----RGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVP 944
            SRS FIQTE TPNP+S+KFLPGR VL     TGV FTP   E  QS LA  L ++ GVT VF   DFI+++K ++  W L++  +F  IMDF+A GKP+M  +P++TDTTILDDDDEVVAMIKELL+ R+RPAVQ+DGGDIF     RGFD  TG V+VQLAGSC GCPSS+VTLKNGVE MLMHYIPEV  +  V DEEL ++N+KE   LE RL+AAG+P
Sbjct:   50 SRSMFIQTENTPNPHSIKFLPGRAVLDERFTTGVDFTPKSPEVRQSLLAKELFTIHGVTRVFFSKDFISVTKTEDEDWDLLRGQIFATIMDFYATGKPIMSDQPIITDTTILDDDDEVVAMIKELLETRIRPAVQDDGGDIFTTPIRRGFDEETGIVSVQLAGSCAGCPSSSVTLKNGVENMLMHYIPEVQGILEVVDEELNEINEKEFQSLEARLRAAGIP 271
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BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: W2QTC7_PHYPN (Nfu_N domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QTC7_PHYPN)

HSP 1 Score: 275 bits (703), Expect = 7.690e-83
Identity = 142/248 (57.26%), Postives = 175/248 (70.56%), Query Frame = 3 
Query:  225 VTERPLLGRN----HPRSRSPWLSQQS--RSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVPFE 950
            V   P+ GR       R+ SP+L++    RS FIQTEPTPNP S+KFLPGR VL     TGV FTP   E  +SPLA  L  +EGVT VF G DFI+++K ++  W  +   +F  IMDFFA  + VM  EP++TDTTIL DDDEVVAMIKELL++R+RP+VQ+DGGDIFY+GFD  TG V VQLAGSC GCPSS+VTLK+GVE ML HYIPEV  +    DEEL  VN+KE   LE++L++ G+P E
Sbjct:   38 VHAHPVAGRAAAALQTRATSPFLARNGALRSMFIQTEPTPNPLSVKFLPGRTVLDDRFTTGVDFTPSSEEVRRSPLAKKLFQIEGVTRVFFGKDFISVTKTEDEDWDALNAEIFATIMDFFASDEQVMSDEPIITDTTILPDDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGMVLVQLAGSCAGCPSSSVTLKHGVENMLKHYIPEVRGIEEWVDEELNAVNEKEFRTLEEKLRSVGIPSE 285
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BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: A0A662XYG1_9STRA (Nfu_N domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYG1_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.130e-82
Identity = 147/260 (56.54%), Postives = 179/260 (68.85%), Query Frame = 3 
Query:  195 AASSAGTLSAVTERPLLGRNH------PRSRSPWLSQQS--RSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVPFE 950
            AA+SA T S    R L GR        PR+ SP+ +     RS FIQTEPTPNP S+KFLPGR VL     TGV FTP   E  +SPLA  L  +EGV  VF G DFI+++K ++  W  +   +F  IMDFFA  + VM  EPV+TDTTIL +DDEVV MIKELL++R+RP+VQ+DGGDIFY+GFD  TG V VQLAGSC GCPSS+VTLK+GVE ML HYIPEV  +   EDEEL  +NQKE   LE++L++ G+P E
Sbjct:   17 AAASAATRSMHVHR-LAGRVSSSAALAPRALSPFAAHGGARRSMFIQTEPTPNPQSVKFLPGRAVLDDRFSTGVDFTPGSEEVRRSPLAKKLFQIEGVVRVFFGKDFISVTKTEDEDWDALNAEIFATIMDFFASEEEVMSDEPVITDTTILPEDDEVVVMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGLVLVQLAGSCAGCPSSSVTLKHGVENMLKHYIPEVRGIEEWEDEELNAINQKEFMTLEEKLRSVGIPSE 275
[Close]
BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: A0A485KKH5_9STRA (Aste57867_8521 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKH5_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.280e-82
Identity = 141/229 (61.57%), Postives = 173/229 (75.55%), Query Frame = 3 
Query:  261 RSRSPWLSQQS-RSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVP 944
            R+R P L   + R+ FIQTE TPNP SLKFLPGRPVL  E  + V FTP   E  +S LA  L ++ GVT VF G DFI+I+K ++  W  ++  +FG IMDF+A GKP+M  E V+TDTTILD+DDEVVAMIKELL+ R+RPAVQ+DGGDIFYRGFD + G V +QLAGSC GCPSS++TLKNGVE MLMHYIPEV  +  V DEELK +N++E   LED+L+AAG+P
Sbjct:   48 RARRPSLFATTVRTMFIQTETTPNPLSLKFLPGRPVLD-ERFSSVDFTPKGPELRRSLLAKDLFTIPGVTRVFFGKDFISITKQEDVDWDELRGQIFGTIMDFYASGKPIMTDEEVITDTTILDEDDEVVAMIKELLETRIRPAVQDDGGDIFYRGFDEDRGIVKLQLAGSCAGCPSSSITLKNGVENMLMHYIPEVRGIEEVVDEELKDLNEQEFKTLEDKLRAAGIP 275
[Close]
BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Match: K3WMX0_GLOUD (Nfu_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMX0_GLOUD)

HSP 1 Score: 273 bits (698), Expect = 4.280e-82
Identity = 158/290 (54.48%), Postives = 194/290 (66.90%), Query Frame = 3 
Query:   93 ALRSLLSRTA-AESLGTQARPALGGAAAQTRRFQVAASSAGTL-----SAVTERPLLGRNH-PRSRSPWLSQQSRSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKNDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGV 941
            ALRSLL  +A A ++ T AR A  G        Q  A +  +L     SA+      G  H P ++S   S  +RS FIQTEPTPNP S+KFLPG  VL     TGV FTP   E  +SPLA  L  +EGVT VF G DFI+++K+++  W  +K  +F  IMDF+A G+ VM  EPV+TDTTIL DDDEVVAMIKELL++R+RP+VQ+DGGDIFY+GFD  TG V+VQLAGSC GCPSS+VTLKNGVE ML HYIPEV  +    DE L Q+N+KE    E +L+AAGV
Sbjct:    5 ALRSLLRASASAAAVATTARSAASG--------QRGARALSSLVRHRNSAMRSAAAAGFTHGPFAKS---SGAARSMFIQTEPTPNPQSVKFLPGEVVLDDRFSTGVDFTPGSEEMRRSPLAKKLFQIEGVTRVFFGKDFISVTKDEDIDWDALKAEIFATIMDFYATGEDVMSDEPVITDTTILPDDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEATGIVHVQLAGSCAGCPSSSVTLKNGVENMLKHYIPEVRGIEEWVDEGLTQLNEKEFQTFEQKLRAAGV 283
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAX5_ECTSI1.030e-18597.87Nfu_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A1V9Y986_9STRA2.540e-8664.22Iron-sulfur cluster scaffold protein Nfu-like prot... [more]
A0A1V9Y8Q5_9STRA6.010e-8564.68Iron-sulfur cluster scaffold protein Nfu n=1 Tax=T... [more]
A0A6G0W9T7_9STRA3.730e-8461.14Nfu_N domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A2D4C4T2_PYTIN2.150e-8356.13Iron-sulfur cluster scaffold protein Nfu-like prot... [more]
A0A067CVC8_SAPPC7.260e-8362.61Nfu_N domain-containing protein n=2 Tax=Saprolegni... [more]
W2QTC7_PHYPN7.690e-8357.26Nfu_N domain-containing protein n=12 Tax=Phytophth... [more]
A0A662XYG1_9STRA2.130e-8256.54Nfu_N domain-containing protein n=2 Tax=Nothophyto... [more]
A0A485KKH5_9STRA2.280e-8261.57Aste57867_8521 protein n=1 Tax=Aphanomyces stellat... [more]
K3WMX0_GLOUD4.280e-8254.48Nfu_N domain-containing protein n=1 Tax=Globispora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig11contigEcto-sp6_S_contig11:947576..954052 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score543.9
Seed ortholog evalue4.7e-152
Seed eggNOG ortholog2880.D8LAX5
Preferred nameNFU4
Model size2375
KEGG koko:K22074
Hectar predicted targeting categorymitochondrion
GOsGO:0000166,GO:0003674,GO:0005198,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0017076,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0030554,GO:0031163,GO:0031974,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042592,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051186,GO:0051235,GO:0051238,GO:0051604,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0097428,GO:0097577,GO:0098771,GO:0106035,GO:1901265,GO:1901363,GO:1901564
Exons6
EggNOG free text desc.NFU1 iron-sulfur cluster scaffold
EggNOG OGsCOG0694@1,KOG2358@2759
Ec32 ortholog descriptionScaffold protein Nfu/NifU, N-terminal
Ec32 orthologEc-27_006080.1
Cds size897
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig11.1277.1prot_Ecto-sp6_S_contig11.1277.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig11 947635..952633 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348781.970822-UTR-Ecto-sp6_S_contig11:947575..9476341682348781.970822-UTR-Ecto-sp6_S_contig11:947575..947634Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig11 947576..947634 +
1682348782.0370228-UTR-Ecto-sp6_S_contig11:952633..9540521682348782.0370228-UTR-Ecto-sp6_S_contig11:952633..954052Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig11 952634..954052 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348781.9828603-CDS-Ecto-sp6_S_contig11:947634..9478451682348781.9828603-CDS-Ecto-sp6_S_contig11:947634..947845Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 947635..947845 +
1682348781.992213-CDS-Ecto-sp6_S_contig11:948104..9482551682348781.992213-CDS-Ecto-sp6_S_contig11:948104..948255Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 948105..948255 +
1682348782.0015774-CDS-Ecto-sp6_S_contig11:949698..9497831682348782.0015774-CDS-Ecto-sp6_S_contig11:949698..949783Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 949699..949783 +
1682348782.0107503-CDS-Ecto-sp6_S_contig11:950829..9510001682348782.0107503-CDS-Ecto-sp6_S_contig11:950829..951000Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 950830..951000 +
1682348782.0194771-CDS-Ecto-sp6_S_contig11:951693..9518611682348782.0194771-CDS-Ecto-sp6_S_contig11:951693..951861Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 951694..951861 +
1682348782.02803-CDS-Ecto-sp6_S_contig11:952522..9526331682348782.02803-CDS-Ecto-sp6_S_contig11:952522..952633Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 952523..952633 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig11.1277.1

>prot_Ecto-sp6_S_contig11.1277.1 ID=prot_Ecto-sp6_S_contig11.1277.1|Name=mRNA_Ecto-sp6_S_contig11.1277.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=299bp
MASTSRYLGHRALRSLLSRTAAESLGTQARPALGGAAAQTRRFQVAASSA
GTLSAVTERPLLGRNHPRSRSPWLSQQSRSFFIQTEPTPNPNSLKFLPGR
PVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVTGVFLGTDFITISKN
DEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIK
ELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKN
GVEKMLMHYIPEVTAVNAVEDEELKQVNQKEVNELEDRLKAAGVPFEP*
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mRNA from alignment at Ecto-sp6_S_contig11:947576..954052+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig11.1277.1 ID=mRNA_Ecto-sp6_S_contig11.1277.1|Name=mRNA_Ecto-sp6_S_contig11.1277.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6477bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:947576..954052+ (Ectocarpus species6 EcLAC_371)
AGCAGCGACAGCCGAATCACAGCCAGACTGGCCTTGGTCACAGAAAAAGA
CAACACGGTATGGCGTCTACGTCGAGATATCTCGGCCATCGCGCACTTCG
ATCGCTTTTGTCGAGAACTGCTGCGGAGTCGTTGGGAACACAAGCGAGGC
CGGCGCTGGGAGGTGCAGCAGCACAAACTCGCCGCTTTCAAGTGGCAGCA
TCATCAGCAGGCACCTTGTCAGCAGTAACAGAGCGTCCGCTGCTGGGCCG
CAACCATCCGAGAAGTCGCTGTGAGCCAATCGTTGTTTTGAAGACGTCTA
GCGTGTACATGCATGCGATTGCTGCTGTCGTTGTGCTCAATGAAGTTCCT
CAGAGTCTACGCTTGTTGAAGAGCACAGAACTGCAACAAGGGAGAGGACG
AACTGCTGTCTTTTGTCTCGTTGCCACCCCACGTTCTTTCACCTTTGCAG
TCAAGGCTGTGCAATTTCGTCCACGCACACACAAACCCGAAGTACCCACT
CCACCCCCGCCCTCGCACCGCACACCCAGCCCCCTGGCTCTCCCAACAGT
CCCGAAGTTTTTTCATCCAGACGGAGCCAACGCCCAACCCCAACTCCCTC
AAGTTCCTACCGGGCCGACCTGTGCTCCCCGCTGAACACGGAACGGGGGT
GTACTTCACCCCCGATGATAGGGAGAAGAGGTGGGCAGGAGGGACATCGG
GGGGGGGGGGTGGCGTCGGTTATGAGAATTCTGCGAGACGTTTTGTGTCA
GCGCCACCTCTATCGGGTGTACGTGTAGCGGAACAATCGGGGTGAGGAAA
GCTCTTCGTTTTGGTAAGAACCCCCATGAATGGATCATTCGAGGGGCTTC
AGCCCATTTGTTGCGTAGGTGTCTTTTTATTAGATCTTTTTCCCCCCAAA
AGAGGCAACCCAAGAAATGATCTAAAAAAAATATGATCCCCTCCTTGCGG
TGCTGGTCCGTCCTTTTTTCTATTCCGAGTCATCGACCAACAAAAAGAGA
CCCTGCAACGGCCGCTGGTCACACATACATACACCTTCCACCGCTATGGT
GTTTCGGTGATATCTCCGCATACAGTGAAGCAACAACGATGACAAAGCTA
TCCGCCATGAGCTGTGTTTATGGTCCGTCTTGTGTGGAGGTTGATACAGA
CCAGGAGGCTGAAGGGCGCTCAAAAATTGTGAGCGCAAGAGTTGTGAACA
AGCGGGAAAAATGACCCGCCTCGTCTTCAAGCAATTTTTTTTGCTCTTTC
CGCCCGTGTCGCAACTTTGGTTTATCGATGCTCCCTCGCCGCCCACTCCA
GCAACAGCGATGACAAAGGTATCCGTCATGAGCTGCGCGTATGGTCCGTC
TTGTGTGGTGGTTGACACAGATCAGGAGGCTATAGCGCGCCCAAAAGTTG
GGTTCGCAAAAGTTGACAGCACACCAACAAAGACCCCCCGCTGCTGCGTC
CAGACTCTCGGCTCGTTTGCCGCTTGTTTGCGCCGCACACATCGGGTTGT
CCACTTGGTCCAGCCGAATGAAAAAACAACGCTGTACCGCTGATGCTACT
GACTCTGCACCAGTCACATGACACAGCTCGTGTGAACACCGTTACAGTAC
AGTTTGCGGGGATCAACCGTCGAGAGATTTGTAGGTAGCGTCACGTGGTT
GTGACCGTAAAAAGACCACAGAAAAAGACAGCCCCGACTTATCCAAAACT
GCCCCAGAAAAAGACAGGATGGGCTGTCCAAAACGGGTTGTCTTTTTTGT
TGGCCTTTTTTCCCTGATAAAAGACACCGTAAGAAGGGGTTCTGTGGCCA
GTTGTCTTTTTTTGAGAAGGAAAAAAGAAAAAGACAGCTCCAAAAAAGAA
CAAATGGCCTCACTGCTGGGTCTCTTTTCCCTGGCTGAGGTGTAAAGCTT
TTGGTCAACACTCGCTACTGCTGATACTTGAGCACGCCCCTTCGACTGTG
GTACTGTGGTATTATCTCGAACGAGCAAGTTTTCTGTGAGTAAATGTAAA
TGTTCTAGAAAGCTGCTCGCAGCATGTGTGCTCAATTCTCCCGTGGTACT
TGTTGAACGCTGTGCTATCACGACATTCCGAACCGACCACCAACAACGTG
ACCACCCCGCCCGTCCTAAGCAGCCAGAGTCCTTTGGCGGTCGCTCTACT
GAGCTTGGAGGGTGTTACGGGCGTCTTTCTCGGGACCGACTTCATCACCA
TTTCCAAGGTGAAGAGAGAGGGGGGGGGGGTCCAGTCTCACCTCTACGTT
CAGCGGAGACTCCACCCATTGGATGTCTATTTGGAGGGTTCGATTCGCGA
AATGTTGGCGACAAGAGTCGAGCTCAGCGTCCTCGCTTTGGTGCTGATGC
TGGTGATACATTCACCCACTGCTCGCTGTTTATAGCGTGATTTTACAACA
CGACGGGTCGAAGCTCGGATCGCGGGGAATGGGGCAATAGGCAGCGCTCG
GGGAGGGAGCTGGCATGGTCGATTCCCATCCTCTCTGCGTGTTATGGTTG
GTACGAAACCCTTTTTTTTTTTTTTTTTTTTTGGTTTTACTTAACCGAAA
GAATGTACGAGGCGTGGCATCTCGAAGCTTGGATGCGATGGACAATACGC
ATGTAACGCATACAGCCACGTGCTACACATGCTGCGGTGGTTGCCCTCTT
GCAGTCTCTGTTGTACCGAGTATCCCCATCTACATGTACCTTGCGTAATA
TTCCGCAGTACCGGTGTGGATGAATGCGTGTCTTCTCGAGAGAAATAACG
CCCTTCTTTAGAAACTCTGGCATCAATTGTGTGTTTCTCTCACTTGAATA
GGATGTTTCTTGGCCACACACACCGCAAAGTTGTTCAACAGGCAGGTGTC
CACCCAACCGAGCACAAGCTTTCCGTGTCTCCACTACAGCGAAGCCATCG
AATCATTGCCGCAGTTGCTTCTCTCTCGAGAAAGGCGAAGTTTTTCACCC
CGATTTTCGGTGCTCGTGACGACGGAGATTCGTTTTTCTGCTCCCCTCGA
GGACAAGGGAGGTACTCGATAGAGGTTATACCGTGTGTTGAGTTTTCATC
AGTGAAGTGTGTAGACAGACAATTTGATCGCTGCAGGAACAATGGCAACT
GCAGCACGATTGACCCCTCTTCAACGACGGGAAGTATTCGATGGAGGCTA
TGCCGCATGTCAAGTTTTAAAGTGTGAAGACAGCAACCACAATAACAGCA
GCAGCAACAATAACAACACCAGCACCATTTGCCCCTCTTCGTCAACGACG
GTAGAACGACGAGGGCGGCTGGACCCTCATGAAGCCGGTCGTGTTCGGCG
AGATCATGGACTTCTTTGCAGAGGGCAAGCCGGTCATGTTGGCCGAGCCG
GTGGTCACGGACACGACCATTCTCGACGATGATGACGAAGTGGTGGCCAT
GATCAAGGAGCTCTTGCAAGAGCGGGTGAGAGAAGGCACAGCAACTCGCG
ATTAGGGGTGGCGGCTATTATGGCCCCTTGATGATCACCCGACGGGAGAC
CTAACAATGTCCCATCGAGGGGGGAGAGAGTCGAAAGCGTATGCGCGGAT
TGTTGTAGGTTTGGTCCGTTGATTGTGGGTCGATTCGATTGGGGCGAGCT
TGTCTGTGTAGCCTCCCCCAATGAGGACCATCAACTCGGAGCTGACGAAG
CCGCAGTTGCCTCAAGGGGTCAAGTCGTGCCGCCTTTTTTGCCCGCAAGA
GACCGCCCCTGCGTTCGTGCCATGCAGCGGTGTGGAGAGGCAACAAGAGG
AGCAGCACGCACGGACGCACTACGGCGGTCATTGGTGGACACGCGCACGT
TCTGTTCGCGCGACAAACTGTGGAGAAAACCCGCATCACCTTGAAAAACG
TTCTGACACATGAATACAACTTGCAGACCCTTGTTTTGCTAGTGTCTGCC
TCGTCCATCCGTTTCTTAACGGACGCGTGTTGTGTCGCGTTTTTGGTCTT
CCCACGTTTAAGGCTAAGCTAGCCCGTGATCACGGGAATCGACGGCGTCA
AGTGTTATATCGGTACGGACAGATGGAGGTACTGGGTAGAGAGATCGGAA
CGGTTTTTCATCTAAAGACAAGACAACTCTGAAAAACAAAAAATTAACAT
AAACCTTCTGGGTGGCAGGTGAGACCGGCGGTACAGGAGGACGGAGGGGA
CATCTTCTACAGGGGCTTCGACCCGAACACGGGCACCGTCAACGTGCAGC
TCGCAGGCTCCTGCGTCGGCTGCCCGAGCTCCACCGTGACCCTCAAGAAC
GGGGTAGAGAAGATGCTGATGCACTACATCCCGGAGGTGACTTTATGGGC
AAAAATGCAGCAAAAAATAACCTTAAAAGCAAGAGGCAATCGAAGCAGGT
GTTTGTGTGAGTGACGCAGCGTCTCCTTTTCTCGCTTTTCACGGCTCTGC
CGTTTCTTAGGCGCTAGTCTTGCCCCCTAGTTCCAGAATTTCCTCTACTG
TTGCCATGAAATATCGCGTGCTTAAAAAACCAATGCAGTTGTCAATGGTG
GTTGATTTGTGCCATGCGTTGTTTTCTCAACGATCAGCGTTTGATAAAAT
CCATGACGAAAATAGTGGTCGCTCCCCTTCTTGGGTGTGCTGGTTCTGCC
CGGCTTGGCTTAAAAAACAACGCCGCTGTGGTGACTACTCTCGATGAGAG
CAAAGACACACCATCAAACTAGGCCAAACAAGTGAAGCAAGTGGGATGAA
AGACCCCGCCGGGTGACGGCGAAAAATTCCGACACACTTTGGCTCGTCCT
TGGCGGGACACTTTCTGCTTTCTTGCCTTTTTTTAGTACTTTTTCTCCTT
GTATTCTATTCTTAAGGTTGAATGTTGTTGTTGTTGTTACCGTTAGTGCA
GTTGTGGTGATTATTATTTCGTCGTCGTCGTCGATGTTGTTGGCAATGGT
GGTGATATTTTTGTATTCGTTGCTGCCTGTTGGTCTGGTTCTGTCAGGTG
ACGGCCGTCAACGCCGTCGAGGACGAGGAGCTGAAACAGGTCAACCAGAA
GGAGGTCAACGAGCTGGAGGACCGACTCAAGGCAGCAGGGGTGCCCTTCG
AACCATGACCCCAATCGCCGAGCAGAGAACCAACAGCAGCCGTCCCCGAG
CACGCCACGTGGTTTGTCCACCCGGACACCTCGCCGTCGACAGGCCGGTT
GTTGTAACCCTTTGGGCTCCTCGTTTAGCTTCCCCACGGACCCCTCGCTA
TCGACAAGCCGGTCGTTATAGTCCTTTGGCTCGTCGTGGGTGCTGAACGT
GTGTCTTTCCCGTGAGGCTACTCGCGCTACGCAAAAAAGCAAGGCAACGC
CCAGCGCTACAGACGGTGCCACGAGGCACCGGGTGGCCTGGCCAAACCGG
AAGACGGTGCCGGTACGGAATAGGCACCACGACATTGTTGGGGGGGGACG
GGACGAGAACCGAACCAGGAGTGTCGGTCGAAATTTTGGGCGACGTTGTC
AGCGAACGGGGCTGACAGCCCGCCTGTTGATCGGAAAAGCGATGAGTGTT
TCGATCGACAAAAAAACACCCGTTTTCGAAAAATGGATGGTGGTTCCAAC
GGGGCTGACTGCCTACCTGTTGAACTTTGTGGTGAAAAGGCGAACGTTTT
CGACCGGAAGTAAACGTAACACATCTCTCTTCTCGTTACCGGAAACAGGG
AGTGGTGCTTCCTCCGTCTCTTGCCTTGCGGGCAGCGAGCCCTCCCTTTG
TTTCATTTGTATTGTTGTCCACCCACAGCCTCCGTGCGTCGTGACGTTTT
GAGAGCAGGCAGCACACCAGTCCCCACGGAGACACGTGCCTGCTCTGCGG
TATGGAATACCGCGAGATGTGGAACAAACACGCCTCTTCGCCAGGGGGTT
GCTTTTGGAGTCGGTGGCGTGTTTGTTGCTTCGTGTGACGGGAGCAAACA
CCAATGGCGCACTCGTTCAAGGCGGTTGGAGTAAAGGTTGGTTCGGTGTG
TCGTGACAACCAGATGGTGCTTTTCGATATCACCATTTGCTCGAGAAAGT
AGGCATTTACGTGCGGCGTGAGTTTTGTTGTTTAAGGGTGGGGGTAGAGT
ATTAGCGATTGTGAGGCTTTCGGTGGGGGTGTTCTATTGCTGCCTGACCA
TCACGGGTGGATTTCACTGTTTACTACGGTCGGACCTCGTGCCCGCACGG
TGAGGCGGGCAACCTAAACGTGTTCTTGCTGTCGTCGATCTGATGAGTCG
GTGATTCTCGTTCTTCTCTGTTGACGCCCGGATGAGGAAATTTTTGAAAT
ATGCTAAGCCTGGTGCTAAGAAGGGGTTCTGTGGCCAGTTGTCTTTTTTT
GAGAAGGAAAAAAGAAAAAGACAGCTCCAAAAAAGAACCGTAAGAAATGG
CCTAAGCGTCAATAAAGGCATGAACAAACTAGGTGCGACAGCAAGAGATT
ATTATTTTCGGCTGTCTACTGCTGCCGTTATACGTAATAGCTCTCGGTGT
TGCCGGAGTTTTCACCTTCCATCTAGC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:947576..954052+

>mRNA_Ecto-sp6_S_contig11.1277.1 ID=mRNA_Ecto-sp6_S_contig11.1277.1|Name=mRNA_Ecto-sp6_S_contig11.1277.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=897bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:947576..954052+ (Ectocarpus species6 EcLAC_371)
ATGGCGTCTACGTCGAGATATCTCGGCCATCGCGCACTTCGATCGCTTTT
GTCGAGAACTGCTGCGGAGTCGTTGGGAACACAAGCGAGGCCGGCGCTGG
GAGGTGCAGCAGCACAAACTCGCCGCTTTCAAGTGGCAGCATCATCAGCA
GGCACCTTGTCAGCAGTAACAGAGCGTCCGCTGCTGGGCCGCAACCATCC
GAGAAGTCGCTCCCCCTGGCTCTCCCAACAGTCCCGAAGTTTTTTCATCC
AGACGGAGCCAACGCCCAACCCCAACTCCCTCAAGTTCCTACCGGGCCGA
CCTGTGCTCCCCGCTGAACACGGAACGGGGGTGTACTTCACCCCCGATGA
TAGGGAGAAGAGCCAGAGTCCTTTGGCGGTCGCTCTACTGAGCTTGGAGG
GTGTTACGGGCGTCTTTCTCGGGACCGACTTCATCACCATTTCCAAGAAC
GACGAGGGCGGCTGGACCCTCATGAAGCCGGTCGTGTTCGGCGAGATCAT
GGACTTCTTTGCAGAGGGCAAGCCGGTCATGTTGGCCGAGCCGGTGGTCA
CGGACACGACCATTCTCGACGATGATGACGAAGTGGTGGCCATGATCAAG
GAGCTCTTGCAAGAGCGGGTGAGACCGGCGGTACAGGAGGACGGAGGGGA
CATCTTCTACAGGGGCTTCGACCCGAACACGGGCACCGTCAACGTGCAGC
TCGCAGGCTCCTGCGTCGGCTGCCCGAGCTCCACCGTGACCCTCAAGAAC
GGGGTAGAGAAGATGCTGATGCACTACATCCCGGAGGTGACGGCCGTCAA
CGCCGTCGAGGACGAGGAGCTGAAACAGGTCAACCAGAAGGAGGTCAACG
AGCTGGAGGACCGACTCAAGGCAGCAGGGGTGCCCTTCGAACCATGA
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