mRNA_Ecto-sp6_S_contig11.1259.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: D8LAV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAV8_ECTSI) HSP 1 Score: 296 bits (759), Expect = 9.010e-102 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1
Query: 1 MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDM+AFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF
Sbjct: 1 MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A5D6Y004_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y004_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.370e-33 Identity = 62/114 (54.39%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 106 VDLESLQLAYPPRTTPEFVLKNGWCPPP-ESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
V+LE L Y P PE V NGW PPP E P LPF V RT G +PVYRDI+NGRTR +TI+++ GD E ++LSKVC G +V AR G L + GDHA ++K+WL+GLGF
Sbjct: 42 VELEVPPLKYEPTYEPERVSFNGWSPPPAEPLPGLPFHVKRTAVGLQLPVYRDIRNGRTRVLTILRRYHGDEEELRTELSKVCLGKEVVARPGRLEVVGDHARDIKKWLTGLGF 155
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: D0NCG0_PHYIT (Uncharacterized protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=D0NCG0_PHYIT) HSP 1 Score: 112 bits (281), Expect = 5.570e-29 Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 127 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
L Y P PE V NGW P PE+ LPF V RT G +PVYRD +NGRTR +TI+++ GD + ++SKVCQG +V R G L + GDHA+++++WL GLGF
Sbjct: 48 LKYEPTYVPEKVSFNGWSPAPEAPLSGLPFHVKRTATGMQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 154
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A6A3EWI4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EWI4_9STRA) HSP 1 Score: 112 bits (280), Expect = 7.880e-29 Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 127 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
L + P PE V NGW P PE+ P LPF V RT G +PVYRD +NGRTR +TI+++ GD ++SKVCQG +V R G L + GDHA+++++WL GLGF
Sbjct: 48 LKFEPSYVPEKVSFNGWSPAPEAPLPGLPFHVKRTAVGMQLPVYRDFRNGRTRVLTILRRYKGDELELRDEMSKVCQGKEVVVRPGRLEVVGDHASDIRKWLVGLGF 154
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A0W8C9Q0_PHYNI (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9Q0_PHYNI) HSP 1 Score: 115 bits (287), Expect = 1.400e-28 Identity = 54/107 (50.47%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 127 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
L Y P PE V NGW P PE+ P LPF V RT G +PVYRD +NGRTR +TI+++ GD + ++SKVCQG +V R G L + GDHA+++++WL GLGF
Sbjct: 168 LKYEPTYVPEKVSFNGWSPAPEAPLPGLPFHVKRTAVGLQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 274
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A8K1FRY2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRY2_PYTOL) HSP 1 Score: 111 bits (277), Expect = 2.230e-28 Identity = 55/113 (48.67%), Postives = 71/113 (62.83%), Query Frame = 1
Query: 109 DLESLQLAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
++E L Y P PE V NGW P PE P+LPF V RT G +PVYRD +NGRTR +TI+++ GD +++SK+C G V R G L + GDHA+ VK+WL GLGF
Sbjct: 42 EVEVPPLKYEPTYVPEKVSFNGWSPAPEQPLPNLPFFVKRTAVGLQLPVYRDYRNGRTRVLTILRRFNGDEGELQAEMSKICGGKDVVLRPGRLEVTGDHASEVKKWLVGLGF 154
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: W7U6S8_9STRA (Ribosomal protein L49/IMG2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6S8_9STRA) HSP 1 Score: 107 bits (267), Expect = 9.460e-27 Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 1
Query: 127 LAYPPRTTPEFVLKNGWCPPPES------KPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGG-ELRIEGDHATNVKRWLSGLGF 444
L YPP P VL NGW PP+ K LPFQV RT KG ++PVY D++ GRT+ +T+V+K +GD+E ++SKVC +V R G L ++G + +++WL+GLGF
Sbjct: 52 LKYPPTYQPSRVLPNGWSAPPDPATVGLPKTSLPFQVERTDKGRWLPVYTDVRKGRTQLITLVRKVSGDLEEMRGEMSKVCANQEVRIRTGPRLEVKGRYTAQLRQWLAGLGF 164
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A484E697_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E697_BRELC) HSP 1 Score: 107 bits (266), Expect = 1.020e-26 Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 127 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
L Y P PE V NGW P PE+ LPF V RT G +PVYRD +NGRTR +TI+++ GD ++SK+C+G +V R G + + GDH ++V++WL GLGF
Sbjct: 48 LKYEPTYVPEKVSFNGWSPAPEAPLTGLPFHVKRTATGLQLPVYRDYRNGRTRVLTILRRYRGDEHELRDEMSKICEGKEVVIRPGRMEVVGDHFSDVRKWLVGLGF 154
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A7S3XRT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRT8_HETAK) HSP 1 Score: 103 bits (256), Expect = 4.280e-25 Identity = 57/143 (39.86%), Postives = 77/143 (53.85%), Query Frame = 1
Query: 70 RNEARRILESGPVDLESLQLAYPPRTTPEFV-----------------LKNGWCPPPESKPD-LPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
RN+ +R+ + PV L + + PE V L NGW PPP + PD PF V RT KG ++PVY DI+NGRT+T TIV++ GD E DLS + G + AR G + + G+H V+ WL+GLGF
Sbjct: 23 RNQVKRLFKKNPVALRHRTKYFGKQVPPEKVAEIPTELQFKPSQEPKALPNGWTPPPATVPDGYPFTVTRTLKGKWLPVYTDIRNGRTKTFTIVRRIEGDPEPLRRDLSALT-GARAVARAGRVEVPGNHVPRVRAWLAGLGF 164
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A5A8CPU9_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPU9_CAFRO) HSP 1 Score: 97.4 bits (241), Expect = 2.690e-23 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 169 NGWCPPPESKPD-LPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
+GW P + P+ LPF V R G G +PVYRDI++GRT+ T+V+K GD EA +L K+C+G V R G + ++GDH +V R+LSGLG
Sbjct: 33 HGWAPATGAVPETLPFAVDRAGPAGSLPVYRDIRHGRTKIYTVVRKIRGDTEAMAQELHKLCRGAPVTQRPGRIEVDGDHKLDVVRYLSGLGL 125 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig11.1259.1 >prot_Ecto-sp6_S_contig11.1259.1 ID=prot_Ecto-sp6_S_contig11.1259.1|Name=mRNA_Ecto-sp6_S_contig11.1259.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=149bp MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTback to top mRNA from alignment at Ecto-sp6_S_contig11:850629..853230+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig11.1259.1 ID=mRNA_Ecto-sp6_S_contig11.1259.1|Name=mRNA_Ecto-sp6_S_contig11.1259.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2602bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:850629..853230+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:850629..853230+ >mRNA_Ecto-sp6_S_contig11.1259.1 ID=mRNA_Ecto-sp6_S_contig11.1259.1|Name=mRNA_Ecto-sp6_S_contig11.1259.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:850629..853230+ (Ectocarpus species6 EcLAC_371)back to top |