mRNA_Ecto-sp6_S_contig108.1118.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: D7FY65_ECTSI (AAA_12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY65_ECTSI) HSP 1 Score: 1318 bits (3410), Expect = 0.000e+0 Identity = 668/692 (96.53%), Postives = 676/692 (97.69%), Query Frame = 1
Query: 1 MYHRRWTNRSRSSFSASRTAARTGFHRGDDDLTRAMGRVSIRATSNIRIPPLSAFSSGAVAVAGSAVRAGECVPPAEDIPTNFRTPTAYLKAMQAHTQKEFEASARQGVNNADRQGGGWLLLTCRPNPRWQDSRLSYYVHGKSENGGLGTRDTEEDGHNFKQDPWSRHLVEFEDSSIALVVACGEGVTDNEAFLAITPGADGIPVRSEHLHTRVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEKVDSFGVLVFGNEARLGPHSKNFTMAGRMANDTELLVWRDARATWTKHLKSAQAVSWSRLHLPNFPGVARLFALEQESLRSTGTGKKHDQLRRSGRAAGKWAFALKRVLKANFYKRLENGSRAQRLMFHQLKALDKWCRLLSEGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMVVSSTFYDGKLKTAEELRLTRMSHQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDHRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVADHFKS 2076
MYHRRWTNRS SSFSASRTAARTGFHRGDDDLTRAMGR+S+RATSNIRIPPLSAFSSGAVAVAGSAVR GECVPPAEDIPTNFRTPTAYLKAMQAHTQKEFEASARQGV+NADRQGGGWL+LTCRPNPRWQDSRLSYYVHGKSENGGLGTRDTEEDGHNFKQDPWSRHLVEFEDSSIALVVACGEGVTDNEAFLAITPG DGIPVRSEHLHTRVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQV TL+ SSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHI ESRIRAEGRVLITSIRNQAVDAVTEKVDSFGVLVFGNEARLGPHSKNFTMAGRMAND ELL WRDAR TWTKHLKSAQAVSWSRLHLPNFPGVARLFALEQESL+STGTGKKH QLRRSGRAAGKWAFALKRVLKANFYKRL NGS AQRLM HQLKALDKW RLLSEGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMVVSSTFYDGKLKTAEELRLTRMSHQP KWVHVSGGETKHQGRGYSNHLEIPKVV+EVRASMHRYGREADIRVITFYNMQKRDLEREFKD+PDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTD RRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVADHFKS
Sbjct: 1 MYHRRWTNRSCSSFSASRTAARTGFHRGDDDLTRAMGRMSVRATSNIRIPPLSAFSSGAVAVAGSAVRVGECVPPAEDIPTNFRTPTAYLKAMQAHTQKEFEASARQGVSNADRQGGGWLVLTCRPNPRWQDSRLSYYVHGKSENGGLGTRDTEEDGHNFKQDPWSRHLVEFEDSSIALVVACGEGVTDNEAFLAITPGTDGIPVRSEHLHTRVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQVRTLDTSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHINESRIRAEGRVLITSIRNQAVDAVTEKVDSFGVLVFGNEARLGPHSKNFTMAGRMANDAELLFWRDARETWTKHLKSAQAVSWSRLHLPNFPGVARLFALEQESLKSTGTGKKHHQLRRSGRAAGKWAFALKRVLKANFYKRLVNGSLAQRLMLHQLKALDKWVRLLSEGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMVVSSTFYDGKLKTAEELRLTRMSHQPSKWVHVSGGETKHQGRGYSNHLEIPKVVQEVRASMHRYGREADIRVITFYNMQKRDLEREFKDKPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDRRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVADHFKS 692
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: A0A6H5JRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT8_9PHAE) HSP 1 Score: 909 bits (2349), Expect = 0.000e+0 Identity = 502/729 (68.86%), Postives = 536/729 (73.53%), Query Frame = 1
Query: 1 MYHRRWTNRSRSSFSASRTAARTGFHRGDDDLTRAMGRVSIRATSNIRIPPLSAFSSGAVAVAGSAVRAGECVPPAEDIPTNFRTPTAYLKAMQAHTQKEFEASARQGVNNADRQGGGWLLLTCRPNPRWQDSRLSYYVHGKSENGGLGTRDTEEDGHNFKQDPWSRHLVEFEDSSIALVVACGEGVTDNEAFLAITPGADGIPVRSEHLHTRVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEKVDSFGVLVFGNEARLGPHSKNFTMAGRMANDTELLVWRDARATWTKHLKSAQAVSWSRLHLPNFPGVARLFALEQESLRSTGTGKKHDQLRRSGRAAGKWAFALKRVLKANFYKRLENGSRAQRLMFHQLKALDKWCRLLSEGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMV-------------------------------------------------------------------------------------------------------------VSSTFYDGKLKTAEELRLTRMSHQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASV 1860
MYHRR TNRSRSSFSASRTAART +HRGDDDLTRAMGR+S+RATSNIRIPPLSAFSSGAVAVAGSAVR GEC+P AE IPTNFRTPTAYLKAMQAHTQKEFEASARQGV+NADRQGGGWLLLTCRPNPRWQDS LSYYVHGKSENGGL T+DTEEDGHNFKQDPWSRHLVEFEDSSIALVVAC EGVTDN+AFLAI PGADGIPV SEHL TRVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQ CTLPSSSGAGTFLPRGQV N + + L++ + +L+ ++T H+ +++ + R+ + S V FGNEARLG HSKNFTMAGRMAND ELL WRDARATWTKHL+ A+AVSW RLHLP+FPG+ARL ALEQESLRSTGTG+KHD+LRRSGR AGKWAFAL VLKANFYKRLENGSRAQRLM QL ALDKW RLLS+GASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMV VSSTFYDGKLKTAEELRLTRMSHQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRAS+ RYG EADIRV TFYNMQKRDLER+FK QPD+K+VRI SV
Sbjct: 1 MYHRRSTNRSRSSFSASRTAARTAYHRGDDDLTRAMGRMSVRATSNIRIPPLSAFSSGAVAVAGSAVRVGECIPRAESIPTNFRTPTAYLKAMQAHTQKEFEASARQGVSNADRQGGGWLLLTCRPNPRWQDSCLSYYVHGKSENGGLDTQDTEEDGHNFKQDPWSRHLVEFEDSSIALVVACVEGVTDNQAFLAIVPGADGIPVLSEHLQTRVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQ-CTLPSSSGAGTFLPRGQVFG-NEARLGLHSKNFTMAGRMANDAELLFWRDA--QATWTKHLKKAKAVSWRRLHLPSFPGLRARGV-----------FGNEARLGLHSKNFTMAGRMANDAELLFWRDARATWTKHLEKAKAVSWRRLHLPSFPGIARLLALEQESLRSTGTGEKHDKLRRSGRTAGKWAFALTCVLKANFYKRLENGSRAQRLMLRQLNALDKWVRLLSQGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMVRTMEEGTREAAIAIGHELDASSCRLTLDTAIMDEAACVLEAAVPVLLALGIKNLTLVGDHRQLQPFSQVRENEAGKHHSRSLMERAIDSGRANQFLDLQYRMHPTLCQVVSSTFYDGKLKTAEELRLTRMSHQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASIQRYGTEADIRVNTFYNMQKRDLERDFKHQPDMKHVRIVSV 714
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: E1ZLN5_CHLVA (Expressed protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLN5_CHLVA) HSP 1 Score: 232 bits (591), Expect = 1.420e-62 Identity = 227/715 (31.75%), Postives = 334/715 (46.71%), Query Frame = 1
Query: 202 RAGECVPPAEDIPTNFRTPTAYLKAMQAHTQKEFEASARQGVNNADRQGGG----WLLLTCRPNPRWQDSRLSYYVHGKSENGGLGTRDTEEDGHNFKQDPWSRHLVEFEDSS---IALVVACGEGVTDNEAFLAITPGADGIPVRSEHLHTRVRSLGYVGSFLREYGSAAELLRRDESDSL-------LNAVAAPGQQCTLPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEKVDSF--GVLVFGNEARLGPHSKNFTMAGRMANDTELLVWRDAR-------------ATWTKHLKSAQAVSWSRLHLPNFPGVARLFALEQESLRSTGTGKKHDQLRR---SGRAAGKWAFALKRVLKANFYKRLENGSRAQRLMFHQLKA--LDKWCRLLSEGASR-----VASLLMRLEGLT-------------------------------------RFRIFTETRVLICT----VDSTERM------VVSSTFYDGKLKTAEELRLTRMSHQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRAS---MHRYG-READIRVITFYNMQKRDLEREFKDQPDIKNV---RIASVDSCQGSDADVVVISTVRS---GGVGYKLSGFMTDHRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSV 2058
+AGE A +P +P AYL MQAHT EF+A+A + +A+ + W + +W+ R G+S D ++G +PW +HLV+ +++ +A + D+ L T A G R+ + ++RSLGY+GSFL +Y SA L + + +L L A P +Q SSSG GT L RG VH L ++ VP+NA Q+ AV L GGL ++ GPPGTGKSTTI+HI+ESR++ +VL+T RNQAVDAV K+ +LVFG E RLG +K +T+ R+A + W D T ++ A+AV + + GVA QE +R+ + ++LR+ S AA A+ R+L A ++ ++ + L ++ A +D R++ E A V ++LM G R F E V + + + RM +S+ FY +L TA R +PC+ V V G E HQG GYSN +E K V R + + G R I +IT YN Q+ LER +P ++ ++ S+D+CQG +AD VV+STVR+ G LS F D RRVNVA+SRA+ C++VG +TLR W +V
Sbjct: 65 KAGE----AAALPDVHASPEAYLTDMQAHTALEFQAAAAAALASAEGRHPEPAQLWWNFGWVSDAKWRALR----TRGQS-------LDFSDEG-----EPWVKHLVQVKETDSYHVARLARRDPDSGDDVLVLLPTVEAGG---RAREV-VQMRSLGYLGSFLLQYTSAQALRYQLRTRTLPPAAQHMLQLAADPTRQL---SSSGQGT-LRRGPVHLLTDT-VPINAGQRAAVEGLQGGLSIIHGPPGTGKSTTIFHIVESRVQPRAQVLVTCSRNQAVDAVVGKLAGVEGSLLVFGREERLGDKAKQYTLTARLARHPTVAAWLDLMRQLQELRDNTVPPGTLAARVRQAEAVLAAVVAAGASDGVA------QEEMRTL--RRLLERLRQRDYSTLAADILQPAITRLL-ARVLPEVKAAAKREILASTRVYACTIDSTPRMVFELADHGVDVDVDTILMDEAGCVAEMAVPPLIKLAPANLVLVGDHLQLPAYSDLVSPPPNHVRSFMERAVALAVPAAMLTNQYRMHPAICRAISAEFYADRLHTAAAAAARRALAEPCRMVQVGGKEVWHQGGGYSNPVEASKAVRVARKAAKELRELGIRHPTIYIITIYNRQRDLLERLVAKEPALRGACDCQVLSIDACQGDEADAVVVSTVRNAFCGSENQHLSSFFRDRRRVNVAMSRARHLCVVVGSLYTLRLPKARPWSAV 741
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: A0A2P6TVU4_CHLSO (DNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVU4_CHLSO) HSP 1 Score: 159 bits (402), Expect = 8.650e-38 Identity = 127/357 (35.57%), Postives = 178/357 (49.86%), Query Frame = 1
Query: 142 RIPPLSAFSSGAVAVAGSAVRAGECVPP----------AEDIPTNFRTPTAYLKAMQAHTQKEFEASARQGVNNADRQG-----GGWLLLTCRPNPRWQDSRLSYYVHGKSENGGLGTRDTEEDGHNFKQDPWSRHLVEF-EDSSIALVVACGEGVTDNEAFLAITPGADGIPVRSEHLHTRVRSLGYVGSFLREYGSAAELLRR--------DESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEKVDSF--GVLVFGNEARLGPHSKNFTMAGRMANDTELLVWR 1134
R+P L F +V GEC P A +P F + AYL AMQ+ EF+AS RQ + A+R+ GW + + R S L G+S + T G +F+QD W RHLV+ E S L + + E +A+ P + S +R+LG+VG FL +Y AA+ LR D + LL AV P TL S A T LP G L VP+NA+Q+ AV +L GGL+++ GPPGTGKSTTI+H+I++ ++ + +VL+T RNQAVD+V +KV G+LVFGN RLG + T+ R+ ++VWR
Sbjct: 64 RLPELDYFCRKLASVLND----GECPPQWRLPYAKAGAAAGLPDAFSSDGAYLDAMQSTAALEFQASIRQALEQAEREQRRTGVSGWHEFVPQRSRRSGGSLL--LDGGESHGTWVFAGHT---GVDFEQDSWGRHLVQVRETGSFHLAIMAKQDDETQEHVMALLPTVECSGSAS------MRTLGFVGPFLAQY-EAAQGLRYSLHCSTLPDRTRQLLAAVVRPS---TLYSRGAASTLLPAGA--RLRTDEVPINASQRAAVEALRGGLNIIHGPPGTGKSTTIFHLIDAGVQPDAQVLVTCTRNQAVDSVVDKVARLEGGILVFGNAKRLGERAAQHTLEARVEAHPAVVVWR 399
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: A0A813JMW8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JMW8_POLGL) HSP 1 Score: 148 bits (373), Expect = 5.000e-33 Identity = 153/534 (28.65%), Postives = 246/534 (46.07%), Query Frame = 1
Query: 637 RVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEKV---DSFGVLVFGNEARLGPHSKNFTMAGRMANDTE--------LLVWRDARA---------TWTKHLKSAQAVSWSRLHLPNFPGVA-RLFALEQESLRSTGTGKKHDQLRRSGRAAGKWAFALKRVLK---ANFYKRLENGSRA--QRLMFHQLKALDKWCRLLSEGAS----RVASLLMR----------------LEGLTRFRIFTETRVL----ICTVDSTERM------VVSSTFYDGKLKTAEELRLTRMSHQ--PCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDHRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVAD 2064
+V+SLGYVGSFL E+ + EL D + P + P G++ R +N ++VP+N +Q+ A+ L L+ + GPPGTGKSTTI+H++++R+ A RVL+T RN AV+++ +K+ + + + VFG R+G ++ + ++ + LLV +RA W + + A+ + + L + A R +S S T D + +A + A RV A+ + L A + + H + + C S A R ++L++ LEG R E VL + T+ RM VVS FY G+L T + R + + P W+ V G E + Y NH E+ V+ R G A I ++TFY Q L++ + P NV + +VD+CQGS+ D VV+STVR+ + GF+ D +R+NVAISR++ + I+G ++TL GG W+ V +
Sbjct: 1279 QVKSLGYVGSFLAEFSAILELRGMQPRD-----MTGPMRAILEPKVDLPGSYANRP----INAAAVPVNPSQRTAIEGLRHALEKIQGPPGTGKSTTIFHVLDARVPAGQRVLVTCSRNVAVESIAQKLSGLEDWPLCVFGPRDRVGETARRHLLDSQVGGQFDERKIGKVALLVAERSRALREAIDGKEAWCRG-RRAEGLLLAYLRKRHAAAYALRDLCSRLDSYCSAATTSP-DWCKTQLQAGKEVVLARARVFLCTIASTSRMLREWEEATGEEMQVHTVIVDECGCTPESSTALLLRLRPSNLVLVGDHKQLPPVSTIQPQILEGTGHTRSLLERCVLASGRVHTLREQYRMHPAISTVVSDLFYAGRLVTPGSVAKARTARENRPLVWLDVQGREEAPEC-SYMNHSEVSASVKVCARLRERAGPLASIALLTFYRGQ---LQQLMQALPSELNVEVLTVDACQGSEFDFVVLSTVRANA--QQRLGFVKDAQRINVAISRSRLQLFIIGHRYTL--GGDKDWKRVME 1793
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: A0A813J659_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J659_POLGL) HSP 1 Score: 148 bits (373), Expect = 5.140e-33 Identity = 150/538 (27.88%), Postives = 243/538 (45.17%), Query Frame = 1
Query: 637 RVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEKV---DSFGVLVFGNEARLGPHSKNFTMAGRMANDTE--------LLVWRDARA---------TWTK----------HLKSAQAVSWSRLHLPNFPGVARLFALEQESLRSTGTGKKHDQLRRSGRAAGKWAFALKRVLKANFYKRLENGSRAQRLMFHQLKALDKWCRLLSEGAS----RVASLLMR----------------LEGLTRFRIFTETRVL----ICTVDSTERM------VVSSTFYDGKLKTAEELRLTRMSHQ--PCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDHRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVAD 2064
+V+SLGYVGSFL E+ + EL D + P + P G++ R +N ++VP+N +Q+ A+ L L+ + GPPGTGKSTTI+H++++R+ A RVL+T RN AV+++ +K+ + + + VFG R+G ++ + ++ + LLV +RA W + +L+ A +++ L +RL + + S K Q + A F + + E + + + H + + C S A R ++L++ LEG R E VL + T+ RM VVS FY G+L T + R + + P W+ V G E + Y NH E+ V+ R G A I ++TFY Q L++ + P NV + +VD+CQGS+ D VV+STVR+ + GF+ D +R+NVAISR++ + IVG ++TL GG W+ V +
Sbjct: 1540 QVKSLGYVGSFLAEFSAILELRGMQPRD-----MTGPMRAILEPKVDLPGSYANRP----INAAAVPVNPSQRTAIEGLRHALEKIQGPPGTGKSTTIFHVLDARVPAGQRVLVTCSRNVAVESIAQKLSGLEDWPLCVFGPRDRVGETARRHLLDSQVGGQFDERKIGKVALLVAERSRALREAIDGKEAWCRGRRAEGLLLAYLRKRHAAAYALRDL-----CSRLDSYCAAATTSPDWCKTQLQAGKEVVLARARVFLCTIASTSRMLREWEEAT-GEEMQVHTVIVDECGCTPESSTALLLRLRPSNLVLVGDHKQLPPVSTIQPQILEGTGHTRSLLERCVLASGRVHTLREQYRMHPAISAVVSDLFYAGRLVTPGSVAKARTARENRPLVWLDVQGREEAPEC-SYMNHSEVSAGVKVCARLRERAGPVASIALLTFYRGQ---LQQLMQALPSELNVEVLTVDACQGSEFDFVVLSTVRANA--QQRLGFVKDAQRINVAISRSRLQLFIVGHRYTL--GGDKDWKRVME 2054
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: A0A812PVU5_9DINO (SETX protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812PVU5_9DINO) HSP 1 Score: 145 bits (367), Expect = 2.860e-32 Identity = 151/550 (27.45%), Postives = 250/550 (45.45%), Query Frame = 1
Query: 592 PGADGIPVRSEHLHT-RVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEKVDS---FGVLVFGNEARLGPHSKNFTMAGRMANDTE-------LLVWRDARATWTKHLKSAQAVSWSRL---HLPNFPGVARLFALE------------------------QESLRSTGTGKKHDQ------LRRSGRAAGKWAFALKRVLKANFYKRLENGSRAQRLMFHQLKALDKWCRLLSEGASRVASLLMR---LEGLTRFRIFTETRVL----ICTVDSTERM------VVSSTFYDGKLKTAEELRLTRMS--HQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDHRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVAD 2064
PG + +R + + +VRSLGY+GSFL EY +A EL R +D V P + P G F R +N + VP+N +Q+ A+ L L+ + GPPGTGKSTTI+HI+++R+ A RVL+T RN AV+++ +K++ + + VFG R+G ++ + + ++ + +++RA + L + +A R L F + + FAL + ++T H+ + + R +W A+ L+ + E G + L+ L+ + + L++ LEG R E VL + + RM +VS+ FY G+L+T + R + +P W+ V G E + Y N E+ ++ V R G + + ++TFY Q LE K P +V + +VD+CQGS+ D VV+STVR+ GF+ D +R+ VA SR++ + +VG + TL S G W+ VA+
Sbjct: 1754 PGKFALKLRGGSVRSGQVRSLGYIGSFLAEYSAALELQRCKPTD-----VTNPMKAILEPKVDLPGDFARRP----VNAALVPVNPSQRAAIEGLKYALEKIQGPPGTGKSTTIFHILDARVPAGQRVLVTCSRNVAVESIAQKLEGLQGWPLCVFGPRDRVGGTARRYLLDSQVGGHLDEPRRRRGAQAAKESRAALSAALTAKEAECRGRRGERFLLAF--LRKRFALAYAMRDLCMRVERYCAAAAASPEWCSQRTQATKEATLHEARILLCTIASTSRMLREWEEAMGTELRVHTVVVDECGCTPESSTALLLRLQPANLVLVGDHKQLPPTSLVQPQILEGTGHNRSLLERCVLASGRVHQLREQYRMHPSIGRLVSNLFYTGRLETPRRVAEDRQACERRPLVWLDVQGREEA-PNKSYINLAEVSTCLKVVTRLRERVGPKPSVALLTFYKGQ---LEELMKAVPSDLDVEVLTVDACQGSEFDFVVLSTVRANRES--RLGFVKDAQRICVATSRSRLQLFVVGHRQTLCSDGD--WKQVAE 2284
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: A0A6A7G2U3_9CRUS (Expressed protein n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G2U3_9CRUS) HSP 1 Score: 136 bits (342), Expect = 1.300e-29 Identity = 159/571 (27.85%), Postives = 259/571 (45.36%), Query Frame = 1
Query: 502 HLVEFEDSSIALVVACGEGVTDNEAFLAITPGADGIPVRSEHLHTRVRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEKVDSFGVLVFGNEARLGPHSKNFTMAGRM-ANDTELLVWRDARATWTKHLKSAQAV------------SWSRLHLPNFPGVARLFALEQ--ESLRSTGTGKKHDQ------LRRSGR-------AAGKWAFALKRVLKAN---FYKRL--ENGSRAQRLMFHQLKALDKWCRLLSEGASRVASLLMRLEGLTRFRIFTETRVLIC--------TVDSTERM------VVSSTFYDGKLKTAEELRLTRMSHQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDHRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVADHFK 2073
HLV+ D++ +VV E N + I P R + ++R LGY+G+F+ AAE+L D+ ++L ++ P + S + LP+ + N +Q+ AV L L+++ GPPGTGKSTTI II+ +I + VL+T+ RN+A+D++ EK ++VFG + R+GP +K T+ ++ AN ++ + R T+ LK A+ S S+ P ++ AL+ E LR + ++ + R+ R + GK L + L A+ + L E G + M LK K L+ + ++ L + +R + + + + C T+ RM +VS +Y GKL + + R P W + E + Y N + + V+ R+ E+ I +I+FYN Q + L FK D K ++I SVD QGS+AD V+ISTVRS GF+ D RR+NV+ISRAK+ VG+ T +S W + + +
Sbjct: 205 HLVQI-DATTHIVVDQDE---KNPRKITIQP-------RIQASKAKIRFLGYIGTFVSNVRCAAEMLSDDDPPAILRSILDP---TVVQSGDFVESDLPKDSL---------CNESQRRAVNGLKYMLEVIQGPPGTGKSTTIAEIIKYKIPPKRLVLVTATRNKALDSIAEKFIGTPIVVFGTKNRMGPTAKRSTLESQIRANPKVRQLFEEVRTIKTQ-LKMAELAIQEGNEQPGSNSSRSQRKSAPVPVSSQHPALKAILEDLREANASLQSERDIVKRLILRNARVLLSTISSTGKMTAELVQTLGASNSQIHTALIDEAGCMEEISMAVILKLRPKNVILVGDH-KQLPPLTLLQSTESRLKKYDRSLMERCVDVSQSCHTLTIQYRMHRSIQDLVSKLYYFGKLSSGP---IVRNRSPPIIWQ-ICSSEEQSVNVSYRNSAQSLRCVDIYVKERKRFPEES-IMIISFYNPQVQLLHEVFKRFNDPK-LQIVSVDGSQGSEADCVIISTVRSNNDS--SIGFLKDERRINVSISRAKQVLYFVGNPETFKSSKHPSWGLILSNVR 742
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: A0A0G4FAV1_9ALVE (AAA_12 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FAV1_9ALVE) HSP 1 Score: 120 bits (302), Expect = 7.140e-25 Identity = 135/486 (27.78%), Postives = 213/486 (43.83%), Query Frame = 1
Query: 646 SLGYVGSFLREYGSAAELLRRDESDS-LLNAVAAPGQQCT---LPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEK----VDSFGVLVFGNEARLGPHSKNFTMAGRMANDTELLVWRDARATWTKHLKSAQAVSWSRLHLPNFPGVARLFALEQESLRSTGTGKKHDQLRRSGRAAGKWAFALKRVLKANFYKRLENGSRAQRLMFHQLKALDKWCRLLSEGASRVASLLMR----LEGLTR-FRIFTETRVLICTVDSTERMVVSSTFYDGKLKTAEELRLTR----MSHQPCKWVHVSG-GETKHQGRGYSNHLEIPKVVEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKN--------VRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDHRRVNVAISRAKEECIIVGDKHTL 2025
SLGY GS + +L S LL ++A P +C +P +G VPLN+TQK+AV L ++ + GPP TGKSTTIYH I+ ++ L+TS++N+A+D+ K VDS VFG +G +K +T+ +M ++ L + R GVA +++ L + + +L+ + G + Q F Q +++ + + RV + L L LTR +R+ + VVSS+FY G+L+T E+ L R M +W+ +G E Q R N E+ V + + + + ++ + VITFY Q LE+ +D +R+ +VDS QG++ADVV++S VRS G K+ GF+++ R+ VA SRAKE +IVGD T+
Sbjct: 188 SLGYFGSQRADAIGLVKLQANPHGQSTLLRSLADPTVRCEASLMPFLDTSGDAAAEA---------VPLNSTQKEAVRGLKYEIEAIQGPPRTGKSTTIYHTIKGQVPLTQVALVTSVQNKAIDSCAAKLQKTVDSVPFFVFGQAENIGETAKRWTLQAQMESEDGSLRTLNGRL-----------------------GVA---VMDEAGLTPE--------------------YKVPALLQLGIKTIVAIGDQQQLQPFSQRTVINEESSVGTGFFQRVVAALQAAGQPLPMLTRQYRMHPKIA-----------SVVSSSFYGGRLETDEDTALNRSLATMGEPAIEWLTYTGCKEEFSQRRSKQNSHEVMMVRDLLEKNKAAWRSKSKM-VITFYRGQHFQLEKSLRDLVKQSRGGDAAEGELRVVTVDSSQGAEADVVILSCVRSNKKG-KI-GFLSNPHRLCVADSRAKERLLIVGDAETV 604
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Match: A0A7S4QCG3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QCG3_9DINO) HSP 1 Score: 120 bits (302), Expect = 1.320e-24 Identity = 142/531 (26.74%), Postives = 227/531 (42.75%), Query Frame = 1
Query: 640 VRSLGYVGSFLREYGSAAELLRRDESDSLLNAVAAPGQQCTLPSSSGAGTFLPRGQVHTLNNSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHIIESRIRAEGRVLITSIRNQAVDAVTEKV---DSFGVLVFGNEARLGPHSKNFTM----------------AGRMANDTELL----VWRDARATWTKHLKSAQAVSWSRLH----LPNFPGVARLF----ALEQESLRSTGTGKKHDQLRR----------SGRAAGKWAFALKRVLKANFYKRLENGSRAQRLMFHQLKALDKWCRLLSEGASRVASLL---MRLEGLTRFRIFTETRVLIC----------TVDSTERMVVSSTFYDGKLKTAEELRLTRMSHQ--PCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDHRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVAD 2064
VRS+GY+GS+L E+ + EL + N V P + P G F + + S VP+N +Q A+ L L+ + GPPGTGKSTTI+HI+++R+ RVL+T RN AV+++ +K+ D + + VFG R+G ++ + AG +A L R+A + + +A R L +F G + A+ + + K L R + R +W A+ L+ + E G + L+ + L+ + + L LEG R E VL + S+ +VS FY G+L T + R + P W V G E + R Y N E+ V A + A + ++TFY Q L++ + P V + +VD+CQGS+ D VV+STVR+ + GF+ D +R+ VAISR++ + ++VG++ TL G W V +
Sbjct: 42 VRSIGYIGSYLSEFAAILELRKLPP-----NEVTRPMRAILQPKVDIPGDFAQKP----VRASLVPVNPSQGAAINGLQHALEKIQGPPGTGKSTTIFHILDARVPPGQRVLVTCSRNVAVESIAQKLEGLDGWPLCVFGPRDRVGETARRHLLDVQVGGHLDERKVPRVAGVVAERASALKAAIATREAACRGCRGDRFLRAFLRKRYAAVYALVDFCGRLASYCDAAAVAPDWCKERAQAGKEQVLGRGRVFLCTIASTSRMLREWEEAMGEELRVHTVVVDECGCTPESSTALLLRLHPQNLVLVGDHKQLPPTSLAPPQALEGTGHTRSLLERCVLASGRVHQLREQYRMHSSIAALVSGLFYAGRLLTPGAVARARAEREGRPLVWHEVQGREEAPE-RSYVNLAEVGACVRAC-ARLRERAAGASVALLTFYRGQ---LDQLMRAVPSDLGVEVLTVDACQGSEFDHVVLSTVRANRE--QRLGFVKDPQRICVAISRSRFQLLVVGNRATL--AGDKDWLRVQE 554 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig108.1118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig108.1118.1 >prot_Ecto-sp6_S_contig108.1118.1 ID=prot_Ecto-sp6_S_contig108.1118.1|Name=mRNA_Ecto-sp6_S_contig108.1118.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=693bp MYHRRWTNRSRSSFSASRTAARTGFHRGDDDLTRAMGRVSIRATSNIRIPback to top mRNA from alignment at Ecto-sp6_S_contig108:29356..35669+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig108.1118.1 ID=mRNA_Ecto-sp6_S_contig108.1118.1|Name=mRNA_Ecto-sp6_S_contig108.1118.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6314bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:29356..35669+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig108:29356..35669+ >mRNA_Ecto-sp6_S_contig108.1118.1 ID=mRNA_Ecto-sp6_S_contig108.1118.1|Name=mRNA_Ecto-sp6_S_contig108.1118.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2079bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:29356..35669+ (Ectocarpus species6 EcLAC_371)back to top |