mRNA_Ecto-sp6_S_contig102.871.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig102.871.1
Unique NamemRNA_Ecto-sp6_S_contig102.871.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 1.380e-137
Identity = 239/474 (50.42%), Postives = 307/474 (64.77%), Query Frame = 3
Query:    3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKD-NWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQN 1418
            N+DAR+V+ L++K AAK+NQS  FK+ F+E +++ L + LK +      W SLVRV+ERI RLWHVLRK                      L+SLLQPL+ ITRD + G VPMTAE HMAFA+LK E+LDPD PL+VFDIP  P SPEAE+  E    +   + +LP  MV    LRPV  KTR+ L+K LVE+L+ RVWD++SADPSPFR+++VLLTP +    +L A  LTAAD++HL      LAPT D  V  KL+ CW DIK RA  AAR+++  SA    + GQP  KRL    +   P    RFA+  R    G    +D    +SED+ L   V+ E+ER+++L+MTA ELD REVL WW  TG+  FPCLAPVAQQV G+Q  A+QVE R+F    N L  NRSR+D YW EMVMFL  N++ IPA + IP+IA K+IR+CLP RF G + DL AAEA  D+++N
Sbjct:  173 NKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRK----------------------LFSLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLKVFDIPATPVSPEAEQADEEVPKK---KKSLPHKMVEPAALRPVATKTRELLTKTLVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKH--SARATAEGGQPPLKRLSTPATKARP----RFASLARNRVRGD--TEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVE-RDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEATFDVIEN 612          
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 2.640e-134
Identity = 214/318 (67.30%), Postives = 245/318 (77.04%), Query Frame = 3
Query:  507 MVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDG-QPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKDNWAN--SEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQNAAIPTADDFGL 1451
            M+ + ELRPVTVKTRKELSKALVERLFGRVWD++SADPSPFRD+AVLLTPPFNTGKYL+ALRL+AADAE+L    +GLAPT D+ VTAKLD CW DIK RAW AARER RRS    +DDG QP  KR R + ST S  R SRF+ FGRG+A     + D+ A+  SEDRKLG +VAGE+E YKSLF+ A ELDCREVL WW RTGKN FP LAPVAQQVFG+Q A SQVE     VG+  L PNRSRMD YW E+VMFL ANF HIP  +QIP++A KNIRSCLPARF+G + DL AAEA  D+L N A P+ +D  L
Sbjct:    1 MILASELRPVTVKTRKELSKALVERLFGRVWDDDSADPSPFRDAAVLLTPPFNTGKYLEALRLSAADAEYLSIGKKGLAPTMDSEVTAKLDGCWADIKRRAWEAARERNRRSES--LDDGVQPLHKRFRGESSTSSATRKSRFSLFGRGDARS---STDDMADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGI-LLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHGRDADLMAAEAIFDVLMNTAPPSVNDIDL 312          
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 1.180e-119
Identity = 218/484 (45.04%), Postives = 297/484 (61.36%), Query Frame = 3
Query:    3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQNAAIPTADDFGL 1451
            N  AR++++ VVK    +N+S  FK  FE++++D L +I K        W SL R +ER  RLWHVLRK+Y+D+G  F L+E + ++ +LQLYSLLQPLS+ITRD + GD PM A+  M F  L  +VLDP + L+VF +PP        +DG    G++  +  LP  MVP ++L     KTR E+ +ALV R +GRVWDE + DP  F  +A LLTPPF+ G ++ A++L A D E+LP++    APT D  VTAKLD  W++IK RA  A ++    ++      G   R R         P     FAAFGR   S GG  +    ++ +++    VA EI RYK +FMT+ +L   EVLS+W  TG+++FP L  VAQQ FGSQ +A+ VE R+F     FL+PNRSR++ YW EMVMFL ANF+ IP  + IP I +K+IR CLPA+F G + DL +AE ALD L+N   P  DD GL
Sbjct:  385 NPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQVPPI------GEDGLPDRGQQ--KKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQAAASSGPGAAGVFKRARTAGXXXRRRPVDGDEFAAFGR---SVGGVEESKQGDAVEQE----VANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVE-RDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGTDEDLLSAEMALDPLRNNTPPGEDDTGL 852          
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 4.450e-104
Identity = 212/476 (44.54%), Postives = 275/476 (57.77%), Query Frame = 3
Query:    3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEA-EKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSP--ARMSRFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQN 1418
            N+DAR V++LV+K AAK+NQS  FK+ F+E ++    ++LK        W SLVRVMERI RLWHVLRKVYA+DG EF LD+ +N++++LQLYSLL+PL+AITRD + G VPM+AE HMAFA+LK E LDP  PL+VFDIPP P+SP A + D E  +    G+  LP   V    LRPV  KTR+ L KALVE+L+ R+WDEESADPSPFR+++VLLTP +   K+LD   LTA DA+HL      LAPT D  V +KLDA W DI+ RA  AAR+ + ++A     DGQP  KR       CSP  A   RFA+  R  A     A  +  +SE   L   ++ EIERY SL++TA E+                                                     +R+   W            HIP  + IP+IA ++I +CLP RF G + DL AAEAA D+++N
Sbjct:  368 NKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTPDSPAALQSDEELPVTVNTGKKPLPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESADPSPFRNASVLLTPSYKDSKFLDGHALTAGDAQHLGEGRAHLAPTLDDDVQSKLDASWADIRKRASDAARKEHSKAA--TGQDGQPPLKRF------CSPSGAPKPRFASLARHRARHES-ADGSDGDSEINVLMQQMSQEIERYHSLYITAEEV-----------------------------------------------------ARLSRTW------------HIPGFKDIPMIAARDIHTCLPPRFNGGDADLTAAEAAFDVIKN 769          
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 1.540e-102
Identity = 202/487 (41.48%), Postives = 282/487 (57.91%), Query Frame = 3
Query:    3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARM-GREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRR---SAPPVVDDGQPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQNAAIPTADDFG 1448
            N  AR+VI++V+K    +N+S+  +  FE++E + L ++LK        W S+VR MERI RLWH LRK+Y+D+G+ F L+E +N+N VLQLYSLL+PL  ITRD + G  PM A+ +M    LK  +L+ ++ L+V++ P         + GE  +  RE     LP  MV    L P   K R+EL +ALV RLFGR W     DPS F DS+ LLTPP+++G ++ A++LT  + ++LPT +  L PT D  V  K    W  IK RA  A +E   +   S     D G   R R   +GS  + A    FA           GA +   + +D  L   VAGEI+R ++L M + +L  R+VL++W ++G++AFP L  VAQQ FGSQ  A+Q+E R+F  G      NR+R+D YW EMV+FLKANF+ IP  + IP + +K+IR CLPA+F G N  L  AE ALD L+N   P     G
Sbjct:   40 NPGARDVIKVVIKVVENLNKSSNLRAKFEDLETELLGEVLKVVKHAPQRWLSMVRTMERIIRLWHALRKLYSDEGKVFPLEEGDNKNGVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILKMGMLNLEKELKVYETP---------RVGENGLPDREEQNKPLPHKMVAHGNLHPAAKKAREELCRALVARLFGRYW-AGCVDPS-FVDSSCLLTPPYSSGIHISAMKLTEEEGDYLPTGLTVLTPTTDEDVEDKKAEAWGMIKKRAIQAVKEDQAQANGSGDGGGDAGPFKRARTSGNGSARNDAGEDHFAVLCTA------GAVEQSGSGDDGDLS--VAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIE-RDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKGTNEYLLDAEMALDPLENKTPPNTSAIG 506          
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 1.950e-96
Identity = 188/461 (40.78%), Postives = 266/461 (57.70%), Query Frame = 3
Query:    3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARM-GREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSR----FAAFGRGEA--SGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARF 1361
            N +A  +++ ++     +++S      FE++++D L ++LK   +    W +LVR MER+ RLWHVLRK+Y+D G+ F+L+E +N++ + QLYSLLQ LS++TRD + G +PM A+ ++ F  LK  VL+    L+VFDIPP          GE  +  R+  +  L   MV  DEL PV  K R +L +ALV R +G VWD+   DPS F D+A LLTPPF+ G YL A++LTA + ++L      +APT D  V  KL+  W +IK RA  A +    R A      G    KR R  G+   P+R       F+ FG  E   S   G   ++   E       V+GEI RYK +FM  ++L   +VL++W + GK  FP L  VAQQ FGSQ +A+Q+E R+F     F   NRSR + YW EMVM LK N+E IP  + IP I +K+IR CLPA++
Sbjct:  141 NPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDIPPL---------GEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQGSDPFKRARTSGAV--PSRRKNYEDDFSMFGCNEVAPSQSDGGDVDFVEEE-------VSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIE-RDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKY 582          
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 1.810e-88
Identity = 196/485 (40.41%), Postives = 253/485 (52.16%), Query Frame = 3
Query:    3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAAR-ERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQNAAIPTADDFGL 1451
            N  AR++++ V+K    +N+S+     FE++++D L ++ K        W  L R +ERI RLWH                                PLS+ITRD + G  PMTAE  M FA LK  VLD   PLRVFDIP         +DG    G +  +  LPS MV +D+L P T   R+EL +AL+ RL+ RVW+E+S +PS F D+A LLTPPF+ G+++ A+RLTA DA +LP S   +APT D  VTAKLD  W +I+ RA  + + E+ R         G P                      F R   SGG  A++     E    G   A E  R     MT+      EVLS+WGRTGK+AFP L  VAQQ FG+Q +A+ VE R+F     F++PNRSR+D YW EMVMFLKANF        IP I  K+IR CLPA+F G + D   AE AL  L N A P     GL
Sbjct:   95 NPAARDLLKTVIKVVETLNKSSNLGAKFEDLQVDLLGEVFKVVKHAPQRWLGLTRTLERIIRLWH--------------------------------PLSSITRDVQYGGAPMTAEIFMKFATLKTNVLDMSEPLRVFDIP------ALGEDGLPNRGEQ--KKALPSKMVSADQLHPTTTLAREELCRALMSRLYERVWNEQSPNPSFFCDAACLLTPPFSEGRHVSAMRLTAEDAMYLPNSSNIIAPTADFEVTAKLDWAWTEIRKRAVESVKTEQDRAGGSDAGGGGGP----------------------FKRAHTSGGRSARNPTDPDEFTDSGRTAAVEEARR----MTSCSRS--EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVE-RDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRIN-IPQIDPKDIRKCLPAKFEGTDEDHLNAEMALYPLSNDAPPAEAGLGL 509          
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 6.410e-75
Identity = 164/423 (38.77%), Postives = 235/423 (55.56%), Query Frame = 3
Query:    3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARM-GREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSR----FAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYW 1253
            N +AR +++ ++     +++S    + FE++++D L ++L    +    W +LVR MER+ RLW V+RK+Y+D G+ F L+E +N++ + QLYSLLQPLS++TRD + G +PM A+ +M F  LK  VL+    L+VFDIPP          GE  +  RE  +  LP  MV  DEL PV  K R EL +ALV R +GRVWD+   DPS F D+A LLTPPF+ G Y  A++LTA + E+L      +APT D  V  KL+  W +IK RA  A +    R+A      G    KR R  G+  +P+R       F+ FGR E +     + +    E+      V+GEI               R+VL++W + G+   P L  VAQQ FGSQ +A+Q+E R+F     F   NRSR + YW
Sbjct:  262 NPEARNMLKNLIGIIGTLHKSNLTAK-FEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPL---------GEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWAEIKKRAITAVKTAQNRAAGEGGGQGSDPFKRARTSGA--APSRRKNYENDFSMFGRNEVAPSQSDEGDVDFVEEE-----VSGEI--------------MRDVLTYWNKVGEQMLPSLKYVAQQTFGSQASAAQIE-RDFSHCGLFSTGNRSRAEEYW 652          
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 7.150e-72
Identity = 147/360 (40.83%), Postives = 210/360 (58.33%), Query Frame = 3
Query:    3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMS---RFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVE 1070
            N +AR++++ V+     +N+S+ FK  FE++++D L D+LK   +    W + VR +ER+ RLWHVLRK+Y+D G+ F L+E +N+N +LQL+SLLQ LS++TRD + G+ PM A+  M F +LK EVLDP +PL+VFDIPP        +DG     RE  +  LP  MV  D+L PV  K R +L +ALV RL+GRVWD  + DPS F D++ LLTPPF+ G +L A++LTA +  +LP     +APT    V  KLD  W  IK  A  A +     +     D      KR R   S  S  +     +FA FGR E +     +D+   S+   +   V GEI RYK +F+ + +
Sbjct:  101 NPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKVFDIPPL------GQDG--LPDREEQKKALPHKMVEPDDLHPVAKKARSKLGRALVSRLYGRVWDHNTLDPSFFCDASCLLTPPFSEGHHLSAMKLTAEEHAYLPAGSVVVAPTSYEEVKEKLDGVWTKIKQGAVKAVKTAQSEAEGSGGDGSGGLFKRARTRHSGSSRRKNPEEHQFACFGRTETT----QEDSQGESD--VVEDDVGGEIMRYKGVFIKSTQ 446          
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5JGB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB7_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.230e-69
Identity = 142/337 (42.14%), Postives = 192/337 (56.97%), Query Frame = 3
Query:   60 QSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLR--ADGSTCSPARMSRFAAFGRGEASGGGGAKDNWANSEDRKL-GGIVAGEIERYKSLFM 1058
            +S+ FK  F+++++D L ++LK   +    W +LVR +ER+ RLW VLRK+Y+D G+ F L+E ++++ +LQLYSLLQP  ++TRD + G  PM A+ +M F  LK  VL P   L+VFD+PP          GE  +  E  +  LP  MV  D+L PV  K R +L +ALV R +GRVWD  + DPS   D+A LLTPPF+ G YL A++LTA   E+LPT     APTPD  V  KLD  W +IK RA  A +    R+A       +   KR R  A GS+    R   FA+FGR E        D  +   D  L    V+ EI RYK +FM
Sbjct:   67 KSSNFKAKFDDLQVDVLGEVLKIPDQAPQRWLTLVRTLERVVRLWRVLRKLYSDTGKTFPLEEGDDKDCILQLYSLLQPFPSVTRDGQYGGAPMLADIYMKFGMLKMRVLHPSEELKVFDVPPL---------GEDGLPEEQKK-ALPQKMVAHDDLHPVAQKARNKLCRALVTRFYGRVWDTSTLDPSVLCDAACLLTPPFSEGNYLSAMKLTAEGCEYLPTGSCVTAPTPDEEVQKKLDGAWAEIKKRAVAAVKTAQSRAAGXXXXXXKRPLKRARTSAAGSSRRKNREDAFASFGRNEV-------DPQSREGDVDLVEKEVSSEIMRYKGVFM 386          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5KZ46_9PHAE1.380e-13750.42Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZQ5_9PHAE2.640e-13467.30Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JJJ9_9PHAE1.180e-11945.04Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L1G0_9PHAE4.450e-10444.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFQ8_9PHAE1.540e-10241.48Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JB08_9PHAE1.950e-9640.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8W6_9PHAE1.810e-8840.41Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5K0P1_9PHAE6.410e-7538.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEE6_9PHAE7.150e-7240.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGB7_9PHAE1.230e-6942.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:503134..505380 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1796
Hectar predicted targeting categoryother localisation
Exons2
Cds size1407
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348739.0123825-UTR-Ecto-sp6_S_contig102:503133..5031861682348739.0123825-UTR-Ecto-sp6_S_contig102:503133..503186Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig102 503134..503186 +
1682348739.0504522-UTR-Ecto-sp6_S_contig102:505044..5053801682348739.0504522-UTR-Ecto-sp6_S_contig102:505044..505380Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig102 505045..505380 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348739.022601-CDS-Ecto-sp6_S_contig102:503186..5042031682348739.022601-CDS-Ecto-sp6_S_contig102:503186..504203Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 503187..504203 +
1682348739.0330184-CDS-Ecto-sp6_S_contig102:504654..5050441682348739.0330184-CDS-Ecto-sp6_S_contig102:504654..505044Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 504655..505044 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.871.1prot_Ecto-sp6_S_contig102.871.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig102 503187..505044 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig102.871.1

>prot_Ecto-sp6_S_contig102.871.1 ID=prot_Ecto-sp6_S_contig102.871.1|Name=mRNA_Ecto-sp6_S_contig102.871.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=469bp
MNQSAAFKEMFEEIEIDALNDILKATGRGAGWPSLVRVMERIFRLWHVLR
KVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETH
MAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPS
AMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLT
PPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKT
RAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSRFAAFGRGE
ASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWG
RTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYW
AEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAAL
DILQNAAIPTADDFGLED*
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mRNA from alignment at Ecto-sp6_S_contig102:503134..505380+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.871.1 ID=mRNA_Ecto-sp6_S_contig102.871.1|Name=mRNA_Ecto-sp6_S_contig102.871.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2247bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:503134..505380+ (Ectocarpus species6 EcLAC_371)
AGAATAGGGACGCGCGCGAGGTCATTAGGCTCGTGGTCAAGACTGCGGCG AAGATGAACCAGTCCGCCGCCTTCAAGGAGATGTTCGAGGAGATCGAGAT CGACGCGCTGAACGACATCTTGAAGGCCACGGGGCGCGGCGCGGGGTGGC CGAGCCTCGTGCGCGTGATGGAGCGCATATTCCGCCTGTGGCACGTCCTG AGGAAGGTCTACGCCGACGACGGCGAGGAATTCCTCCTCGACGAGGACAA CAACAGGAACGATGTCCTCCAGCTCTACTCGCTCCTGCAGCCTCTCTCCG CGATAACGCGCGACAGCCGGTGCGGCGACGTGCCGATGACCGCGGAGACG CACATGGCGTTCGCGCAGCTCAAGGCGGAGGTGCTCGACCCCGACCGGCC GCTTAGGGTGTTCGACATCCCCCCTGCGCCGAACTCCCCGGAGGCGGAAA AGGACGGCGAGGCGCGAATGGGGCGGGAGGGGGGCAGACCGACGTTGCCG TCGGCGATGGTGCCCTCGGACGAGTTGCGTCCGGTCACGGTCAAGACACG GAAGGAACTGAGCAAAGCCCTCGTGGAGAGGCTCTTCGGGCGAGTGTGGG ACGAGGAATCCGCCGACCCCTCCCCGTTCCGCGACTCCGCCGTGCTCCTC ACCCCACCGTTCAACACCGGCAAGTACCTGGATGCCCTCCGGCTGACTGC GGCGGACGCGGAGCACCTTCCCACCAGCATGAGGGGATTGGCGCCAACCC CGGACGCCGGCGTGACGGCGAAGCTTGACGCTTGCTGGCGCGACATTAAG ACCAGGGCCTGGGGAGCTGCGCGAGAGCGGTACCGCCGATCTGCGCCACC AGTCGTGGACGACGGGCAACCGTCTCGAAAGCGCCTCCGCGCCGACGGCT CAACCTGTAGCCCCGCCAGAATGAGCAGGTTCGCTGCCTTTGGGCGGGGC GAAGCCAGCGGCGGCGGCGGCGCTAAAGACAACTGGGCGAATAGTGAGGA CAGGAAGCTGGGTGGGATCGTGGCGGGCGAAATCGAGCGCTACAAGTCGC TCTTCATGACGGCAGTCGAGGTATGTCGGAAACACAACGTTTTCAAGCGT GTTTCTTGTTATTGAAATATTTCATGGGCATTTTCATAGTTCGGTAGTCT GCCAGGCATGGCCGGCAGGGCCTTTTCTCGAAGCCTTGTCTGGTAGGTGG ATGTGTAGCGCAGTCAAAGCATGTGTACGTTGGGATTTTGCGAGGGATGT AGGAATGACGTTGTATGAGTGACGGGCACACTTGTCCGTCAAAAGGAACG TGTGGGCCCATGTTTGTCGGTAGTCACAGATTCTTTGCGTTGTTTCATGT TCAATCGGATGTGAAATGTGATCGCAACGTTGTACAACCAATGTTGATGT GGATTGCTGTGCTCTTGGCGCTTGTTCTGCACCTCGCTGTTCTGTGCTGC ACGGGGGGAATGCTCCTCTTTCGACGGGAAAACAAAGCCACCTCGCCTGC TTCGTTCGTTGAATTGCGCAGTTGGACTGCCGCGAGGTGCTGTCCTGGTG GGGGCGCACGGGCAAGAACGCCTTCCCTTGCCTCGCCCCGGTCGCACAGC AGGTGTTCGGAAGCCAGGTGGCAGCCTCGCAGGTAGAGGATCGCAACTTC GACGTCGGCGTTAACTTTCTCATGCCCAACAGGAGCCGCATGGATGTCTA CTGGGCGGAGATGGTGATGTTCCTCAAGGCCAACTTTGAGCACATCCCCG CGACGGAGCAGATCCCCGTGATCGCCACCAAGAACATCCGGTCGTGTCTG CCGGCGCGGTTCTACGGGCTGAACCCGGACTTGTTCGCCGCTGAAGCCGC CCTCGATATACTGCAAAACGCCGCGATCCCTACCGCGGATGATTTCGGGT TGGAGGACTGAAGATACCTAGCGTGGCTTTGTGCTTCACGTCTGTAGCAA GTTTTTTCGAATCTTGTGTGGCCATTCAAACCTCAGCGGCAAAGATGTCC ATCAATAGAGAAATTGTCGATGTCTGTCCGTTTCGAATCTCTACCGAACG TGTAGTAGCGATTGCTGTTGCAGCTTGGTCGGGCGGAGAGGTTCTTGCTC CTCGTTTGTGGTGTCGTGTTAATCACCAGTTGTTTTGGTTATTATTTTCA TACGAGCTTCTGTATATTGCATTTGTATACCTTCGTGCACGATGTGCGCA ACGAGAGAAGCATTGTCTTGTGTGTTTGTATTCTTGCAGTATACGAC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:503134..505380+

>mRNA_Ecto-sp6_S_contig102.871.1 ID=mRNA_Ecto-sp6_S_contig102.871.1|Name=mRNA_Ecto-sp6_S_contig102.871.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1407bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:503134..505380+ (Ectocarpus species6 EcLAC_371)
ATGAACCAGTCCGCCGCCTTCAAGGAGATGTTCGAGGAGATCGAGATCGA
CGCGCTGAACGACATCTTGAAGGCCACGGGGCGCGGCGCGGGGTGGCCGA
GCCTCGTGCGCGTGATGGAGCGCATATTCCGCCTGTGGCACGTCCTGAGG
AAGGTCTACGCCGACGACGGCGAGGAATTCCTCCTCGACGAGGACAACAA
CAGGAACGATGTCCTCCAGCTCTACTCGCTCCTGCAGCCTCTCTCCGCGA
TAACGCGCGACAGCCGGTGCGGCGACGTGCCGATGACCGCGGAGACGCAC
ATGGCGTTCGCGCAGCTCAAGGCGGAGGTGCTCGACCCCGACCGGCCGCT
TAGGGTGTTCGACATCCCCCCTGCGCCGAACTCCCCGGAGGCGGAAAAGG
ACGGCGAGGCGCGAATGGGGCGGGAGGGGGGCAGACCGACGTTGCCGTCG
GCGATGGTGCCCTCGGACGAGTTGCGTCCGGTCACGGTCAAGACACGGAA
GGAACTGAGCAAAGCCCTCGTGGAGAGGCTCTTCGGGCGAGTGTGGGACG
AGGAATCCGCCGACCCCTCCCCGTTCCGCGACTCCGCCGTGCTCCTCACC
CCACCGTTCAACACCGGCAAGTACCTGGATGCCCTCCGGCTGACTGCGGC
GGACGCGGAGCACCTTCCCACCAGCATGAGGGGATTGGCGCCAACCCCGG
ACGCCGGCGTGACGGCGAAGCTTGACGCTTGCTGGCGCGACATTAAGACC
AGGGCCTGGGGAGCTGCGCGAGAGCGGTACCGCCGATCTGCGCCACCAGT
CGTGGACGACGGGCAACCGTCTCGAAAGCGCCTCCGCGCCGACGGCTCAA
CCTGTAGCCCCGCCAGAATGAGCAGGTTCGCTGCCTTTGGGCGGGGCGAA
GCCAGCGGCGGCGGCGGCGCTAAAGACAACTGGGCGAATAGTGAGGACAG
GAAGCTGGGTGGGATCGTGGCGGGCGAAATCGAGCGCTACAAGTCGCTCT
TCATGACGGCAGTCGAGTTGGACTGCCGCGAGGTGCTGTCCTGGTGGGGG
CGCACGGGCAAGAACGCCTTCCCTTGCCTCGCCCCGGTCGCACAGCAGGT
GTTCGGAAGCCAGGTGGCAGCCTCGCAGGTAGAGGATCGCAACTTCGACG
TCGGCGTTAACTTTCTCATGCCCAACAGGAGCCGCATGGATGTCTACTGG
GCGGAGATGGTGATGTTCCTCAAGGCCAACTTTGAGCACATCCCCGCGAC
GGAGCAGATCCCCGTGATCGCCACCAAGAACATCCGGTCGTGTCTGCCGG
CGCGGTTCTACGGGCTGAACCCGGACTTGTTCGCCGCTGAAGCCGCCCTC
GATATACTGCAAAACGCCGCGATCCCTACCGCGGATGATTTCGGGTTGGA
GGACTGA
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