prot_Ecto-sp6_S_contig102.867.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig102.867.1
Unique Nameprot_Ecto-sp6_S_contig102.867.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp6_S_contig102.867.1 vs. uniprot
Match: A0A6H5JBC2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC2_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.210e-39
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 0 
Query:    1 MAITISRRALQGAEKQIFDFMAETCTPEQWAAWLSAAVVNAADKGKAGLVQKLAKAGAEIGVAMHAAALRGDQEVANSLLQNGASI 86
            MAITI+RR L+GAEKQIFDFMA+TC PEQWAAWLSAAVVNAAD GKAGLVQKLA +GAEIGVAMHAAALRGDQEVANSLLQNGA I
Sbjct:    1 MAITITRRTLRGAEKQIFDFMADTCIPEQWAAWLSAAVVNAADTGKAGLVQKLATSGAEIGVAMHAAALRGDQEVANSLLQNGALI 86
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BLAST of mRNA_Ecto-sp6_S_contig102.867.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 7.350e-32
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0 
Query:   21 MAETCTPEQWAAWLSAAVVNAADKGKAGLVQKLAKAGAEIGVAMHAAALRGDQEVANSLLQNGASIN 87
            MAETCTPEQWAAWLSAAVVNAADKGKAGLVQKL KAGAEIGVAMHAAALRGDQ+VANSLLQNGASIN
Sbjct:    1 MAETCTPEQWAAWLSAAVVNAADKGKAGLVQKLVKAGAEIGVAMHAAALRGDQDVANSLLQNGASIN 67
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BLAST of mRNA_Ecto-sp6_S_contig102.867.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.010e-9
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 0 
Query:    7 RRALQGAEKQIFDFMAETCTPEQWAAWLSAAVVNAADKGKAGLVQKLAKAGAEIGVAMHAAALRGDQEVANSLLQNGASI 86
            RRAL+GAE + FD  +E  T   WA  L   +  AA +G   L QKL +AGA++G A+HAA   G  EV  +LL++GA +
Sbjct:   23 RRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACV 102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JBC2_9PHAE3.210e-3989.53Reverse transcriptase domain-containing protein n=... [more]
D7G981_ECTSI7.350e-3297.01Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LL12_ECTSI1.010e-945.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 6..87
e-value: 7.8E-7
score: 30.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 28..87
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 59..87
score: 10.045
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 59..87
score: 10.02

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:494247..494507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.867.1mRNA_Ecto-sp6_S_contig102.867.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig102 490290..494507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig102.867.1 ID=prot_Ecto-sp6_S_contig102.867.1|Name=mRNA_Ecto-sp6_S_contig102.867.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=87bp
MAITISRRALQGAEKQIFDFMAETCTPEQWAAWLSAAVVNAADKGKAGLV
QKLAKAGAEIGVAMHAAALRGDQEVANSLLQNGASIN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom