prot_Ecto-sp6_S_contig102.856.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig102.856.1
Unique Nameprot_Ecto-sp6_S_contig102.856.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length474
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.856.1 vs. uniprot
Match: A0A6H5KDB5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB5_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 2.240e-107
Identity = 208/424 (49.06%), Postives = 268/424 (63.21%), Query Frame = 0
Query:   15 DCDGTEGALTVVAAELAMKSQQRNLFGSRRVQGRAIAGLSQEFATHRRETRRHLSEATAGLQSASQAIAEGLMGVREDLC----------------------------YGTTQLTRGVAAVKSEVGTVIEKVDGVWNAVESGLLEVNYAVRQGTTVVYRSLEELKGDMARMERSVIKAGQDNLLSLQNVSSRLEN-------FERNMERRDQERDRSMLETEGRKASNYLNKFAASCE-DVRSLDLANDSCQNILANRPRLDTLDLHFTAGVVAVATSYAKNVQLTSSATAKKTVFDGEVRNISESLKPIWADSSAVLTSTWEEVVIYLLDIASSICILPPEGVLLSPLDSQLVEAFGVLCASQPSLRDRFPEVGGASLRTLLQAKTLNELCHASNVLKVDTSRCDNKADLIQRLLDEGKPLHA 402
            +CD  EGA+  V  ELAMK+  R  FGSR ++ RAI GLS EFATHRR+ +  LSE  A     SQA+AEG + VR DL                             YGT QL +GVAAV++++ TVIE ++GV   V +GL EVN+ VRQGT V+YRSL++L+ DM  ++ S+ +A ++N    Q++SSRL +        E     R+Q+++ S L+    +A  YLN+F  +   D+  LD A+  C  +L  RP LDTLD H  AG++ VATSY K+ QL    TAK+ VFD +  NI+  LKP WAD +A  T TW  VV YLL+++SSIC+LPPEG++L  LD  LVEAFG LC SQPSL DRFPEVGGA+ R+LLQAK L+ELC  SN  +VD S C+NKADLIQ LLD GKPL A
Sbjct:  344 ECDTVEGAIMAVGTELAMKAH-RKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELAARQGRTSQALAEGFLDVRGDLRDLXXXXXXXXXXXXXXXXXXXXXXNDFRYGTDQLVKGVAAVRTDLDTVIENMEGVREEVVTGLQEVNHTVRQGTAVIYRSLQDLRCDMGELQLSMDQAREENSHYFQDISSRLNDVKLGLIALEATYVMREQQKELSKLQNSLSEAGIYLNQFTGTGGGDLGLLDKAHTCCCKVLRLRPHLDTLDAHKMAGIIMVATSYRKHAQLKPPVTAKQYVFDSDFLNITNLLKPFWADHAAAHTPTWSNVVRYLLELSSSICLLPPEGLVLGELDPGLVEAFGELCCSQPSLLDRFPEVGGAAWRSLLQAKPLDELCRTSNAAEVDISLCNNKADLIQALLDAGKPLGA 766          
BLAST of mRNA_Ecto-sp6_S_contig102.856.1 vs. uniprot
Match: D7G6V2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V2_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 1.710e-98
Identity = 190/389 (48.84%), Postives = 253/389 (65.04%), Query Frame = 0
Query:   48 RAIAGLSQEFATHRRETRRHLSEATAGLQSASQAIAEGLMGVRE-DLCYGTTQLTRGVAAVKSEVGTVIEKVDGVWNAVESGLLEVNYAVRQGTTVVYRSLEELKGDMARMERSVIKAGQDNLLSLQNVSSRLENFERNMERRDQERDRSMLETEGRKASNYLNKFAASCE-DVRSLDLANDSCQNILANRPRLDTLDLHFTAGVVAVATSYAKNVQLTSSATAKKTVFDGEVRNISESLKPIWADSSAVLTSTWEEVVIYLLDIASSICILPPEGVLLSPLDSQLVEAFGVLCASQPSLRDRFPEVGGASLRTLLQAKTLNELCHASNVLKVDTSRCDNKADLIQRLLDEGK--PLHAALNTEQNTDEETKTDNFHDQGEIYSVAESD 432
            RAI GLS+EFA HR + RR L+  T G QSASQAIAE L+G+   DL   T +LTRG AAV++++GTV+E VDG+WN+V +GLLEVNYAVR GT V+YRSLE L  DMA +   + KA ++N    Q VSSRL+ FE  +    Q++D   L+   +KA   L +F  +   + + LD A +SC  IL   P  D+L +HF AG +A+A S+ K+ Q    A AK  VFDG  RN+  S +  W D  A  T     VV YLL I SS+C+LPPEG+LL  LD +LV+AFGVLC+S+PS+ DR+PEVGGA++R LLQ+K L+ELC  S  L VD + CDN+ADLIQ +LD+ K  P+ AA+      D+ TKT+      ++ S ++ D
Sbjct:   16 RAIPGLSKEFAEHRSQARRDLAGNTTGQQSASQAIAEELVGIHAADL--QTDKLTRGKAAVRTDLGTVME-VDGIWNSVSNGLLEVNYAVRHGTAVIYRSLEGLHEDMASLRSCIDKAQRENSKCFQQVSSRLQAFEEYVRSHHQQQDGKSLQRSLKKARMCLIEFTGTGGGEPQLLDQAKESCMEILIREPHSDSLRVHFLAGCIAIAASFTKHAQQEPPARAKAYVFDGVFRNVMLSFESFWTDPCAARTRNGICVVEYLLSIVSSVCMLPPEGLLLPQLDDRLVKAFGVLCSSEPSILDRYPEVGGAAVRALLQSKPLDELCRMSKSLGVDIALCDNRADLIQGMLDKRKSIPVDAAM------DQVTKTNQRESSSDVDSNSDDD 395          
BLAST of mRNA_Ecto-sp6_S_contig102.856.1 vs. uniprot
Match: D7FKB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKB6_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 3.760e-67
Identity = 148/331 (44.71%), Postives = 196/331 (59.21%), Query Frame = 0
Query:   15 DCDGTEGALTVVAAELAMKSQQRNLFGSRRVQGRAIAGLSQEFATHRRETRRHLSEATAGLQSASQAIAEGLMGVREDL----------------------------CYGTTQLTRGVAAVKSEVGTVIEKVDGVWNAVESGLLEVNYAVRQGTTVVYRSLEELKGDMARMERSVIKAGQDNLLSLQNVSSRLEN-------FERNMERRDQERDRSMLETEGRKASNYLNKFAASC-EDVRSLDLANDSCQNILANRPRLDTLDLHFTAGVVAVATSYAKNVQLTSSATAKKTVFDGEVRNISESLKPIWADSSAVLTSTWEEVVIYLLD 309
            +CD  EGA+  V  ELAMK+Q R  FGSR ++ RAI GLS EFATHRR+ +  LSE  A     SQA+AEG + VR D                              YGT QL +GVAAV +++ TVIE V+GV N V +GLLEVN+ +RQGT V+YRSL++L+  M  ++ S+ +A ++N L  Q+VSSRL +        E     R+Q+++ S L+    +A  YLN+F  +  ED+  LD A+  C  +L  RP L+TLD H  AG++ VATSY K+ QL   ATAK+ VFD +  NI+ SLK  WAD +A  T TW  VV YLLD
Sbjct:   55 ECDTVEGAIMAVGTELAMKAQ-RKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELVARQGRTSQALAEGFLDVRGDFRDLXXXXXXXXXXXXXXXXXXXXXXXXXXYGTDQLIKGVAAVHTDLDTVIENVEGVRNEVVTGLLEVNHTLRQGTAVIYRSLQDLRCVMGELQLSMDQAREENSLYFQDVSSRLNDVKSGLIALEATYVMREQQKELSKLQNSLSEAGMYLNQFTGTGGEDLGLLDKAHTCCCKVLRLRPHLETLDAHKMAGIIMVATSYRKHAQLKPPATAKQYVFDSDFLNITNSLKHFWADHAAAHTPTWSNVVCYLLD 384          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KDB5_9PHAE2.240e-10749.06Integrase catalytic domain-containing protein n=1 ... [more]
D7G6V2_ECTSI1.710e-9848.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FKB6_ECTSI3.760e-6744.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..167
NoneNo IPR availableCOILSCoilCoilcoord: 172..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:326863..333125 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.856.1mRNA_Ecto-sp6_S_contig102.856.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig102 326805..333885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig102.856.1 ID=prot_Ecto-sp6_S_contig102.856.1|Name=mRNA_Ecto-sp6_S_contig102.856.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=474bp
MEFSVQVEEGECDEDCDGTEGALTVVAAELAMKSQQRNLFGSRRVQGRAI
AGLSQEFATHRRETRRHLSEATAGLQSASQAIAEGLMGVREDLCYGTTQL
TRGVAAVKSEVGTVIEKVDGVWNAVESGLLEVNYAVRQGTTVVYRSLEEL
KGDMARMERSVIKAGQDNLLSLQNVSSRLENFERNMERRDQERDRSMLET
EGRKASNYLNKFAASCEDVRSLDLANDSCQNILANRPRLDTLDLHFTAGV
VAVATSYAKNVQLTSSATAKKTVFDGEVRNISESLKPIWADSSAVLTSTW
EEVVIYLLDIASSICILPPEGVLLSPLDSQLVEAFGVLCASQPSLRDRFP
EVGGASLRTLLQAKTLNELCHASNVLKVDTSRCDNKADLIQRLLDEGKPL
HAALNTEQNTDEETKTDNFHDQGEIYSVAESDTSSDGDWNVWAANEENDV
GRSETDNDTLEALKTRRMARWAR*
back to top