mRNA_Ecto-sp6_S_contig102.834.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig102.834.1
Unique NamemRNA_Ecto-sp6_S_contig102.834.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: D7FZ81_ECTSI (Similar to origin recognition complex, subunit 5-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ81_ECTSI)

HSP 1 Score: 518 bits (1334), Expect = 2.910e-179
Identity = 281/307 (91.53%), Postives = 282/307 (91.86%), Query Frame = 1 
Query:  496 MFGLDLNVNLRDGXXXXXXXXXXXXXESGRKRRVRGNDEGRKLFRKMATALVTTLQNETRDAWELGAEAARIWPAYKRSAEDGCYDAHLAAALKPLLTETTKRLHGFGRQDDDKRQNQNNNGKDKRGRNGDAKKEGRVKPNGLGLSRSGKHLLVSAYLASHNSRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAG-----------VQDLPEAREFQLERLLSIMSSIVAVTEAGTKAANSMGSTELFAQIKSLTKLNLMRDCGQRKSFDLDCPSYRCNISRELAEAVAKEIGLDLSQYLVTA 1383
            MFGLDLNVNLRDG             ESGRKRRVRGNDEGR+LFRKMATALVTTLQNETRDAWELGAEAARIWPAYKRSAEDGCYDAHLAAALKPLLTETTKRLHGFGRQDDDKRQNQNNN KDKRGRNGDAKKEGRVKPNGLGLSRSGKHLLVSAYLASHNSRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAG           VQDLPEAREFQLERLLSIMSSIVAVTEAGTKAANSMGSTELFAQIKSLTKLNLMRDCGQRKSFDLDCPSYRCNISRELAEAVAKEIGLDLSQYLVTA
Sbjct:    1 MFGLDLNVNLRDGGGGRGGSAEGGG-ESGRKRRVRGNDEGRELFRKMATALVTTLQNETRDAWELGAEAARIWPAYKRSAEDGCYDAHLAAALKPLLTETTKRLHGFGRQDDDKRQNQNNNSKDKRGRNGDAKKEGRVKPNGLGLSRSGKHLLVSAYLASHNSRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAGRFRSRIAEHFKVQDLPEAREFQLERLLSIMSSIVAVTEAGTKAANSMGSTELFAQIKSLTKLNLMRDCGQRKSFDLDCPSYRCNISRELAEAVAKEIGLDLSQYLVTA 306
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: A0A6H5K0F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0F2_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 1.860e-67
Identity = 134/153 (87.58%), Postives = 134/153 (87.58%), Query Frame = 1 
Query:    1 VGAGGAGGAGNQWRGQDILTKLASLQGMVDSLTGFAGEEAPLTATGGXXXXXXXXXXXQDPHSNASNISAAHLPSQSTPFGRHHXXXXXXXXXXGQPRLPPICPILISQNGFFASEIMGGRGGGGDWRGAGGRNRSLVMNAYPVQVRFPPYTK 459
            VGAGGAGGAGNQWR QDILTKLA LQGMVDSLTGFAGEEA LTA       XXXXXX QD H NASNISAAH PSQSTPFGRH XXXXXXX   GQPRLPPICPILISQNGFFASEIMGGRGGGGDWRGAGGRNRSLVMNAYPVQVRF PYTK
Sbjct:   18 VGAGGAGGAGNQWRDQDILTKLAGLQGMVDSLTGFAGEEATLTAA------XXXXXXDQDLHYNASNISAAHRPSQSTPFGRHXXXXXXXXQ--GQPRLPPICPILISQNGFFASEIMGGRGGGGDWRGAGGRNRSLVMNAYPVQVRFQPYTK 162
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: A0A7M5X478_9CNID (AAA domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X478_9CNID)

HSP 1 Score: 69.7 bits (169), Expect = 6.520e-9
Identity = 49/144 (34.03%), Postives = 81/144 (56.25%), Query Frame = 1 
Query:  943 KHLLVSAYLASHNSRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAGVQDLPEAREFQLERLLSIMSSIVAVTEAGTKAANSMGSTELFAQIKSLTKLNLMRDCGQRKSFDLDCPSYRCNISRELAEAVAKEIGLDLSQYL 1374
            K++L++AY AS+N  +TDR  FT K+  R  ++   ++SA  A+NL +  +   P    FQL+RL++I  SIV   E G  +     S  + +Q+ SL  L L+          +D P Y+C +S + A ++AK++ LD+ +YL
Sbjct:  314 KYMLLAAYFASYNPANTDRRFFTKKTAGRMSKR--AKASAKAAKNLDKKFLGPKP----FQLDRLMAIFYSIV---EGGASS-----SANILSQLSSLVTLQLLAKTSN--DDQVDTPKYKCLVSFDFALSIAKQLDLDMGEYL 441
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: A0A0N5CU16_THECL (Uncharacterized protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CU16_THECL)

HSP 1 Score: 69.3 bits (168), Expect = 7.450e-9
Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = 1 
Query:  928 LSRSGKHLLVSAYLASHNSRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAGVQDLPEAREFQLERLLSIMSSIVAVTEAGTKAANSMGSTELFAQIKSLTKLNLMRDCGQRKSFD--LDCPSYRCNISRELAEAVAKEIGLDLSQYLV 1377
            LS S K+LL++AY AS+NS ++DR  FT    K+ +R  + +    NA +  E G       + F L+RLL I  S++   +  T+ A      ++ AQ+  L  + L+     R S D  LD P YRC I+ + AE +AK +G+ +  +L+
Sbjct:  268 LSISAKYLLIAAYCASYNSPNSDRRFFTKNHGKQRRRTTTAKGIRNNAISAHETG------PKPFSLQRLLFIYLSMLEKHDMSTQCA-----ADINAQVAELCAMGLLN----RVSADGNLDTPKYRCIITFDFAEQLAKAMGIKIRDFLI 404
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: A4RUG0_OSTLU (AAA domain-containing protein n=3 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RUG0_OSTLU)

HSP 1 Score: 67.4 bits (163), Expect = 3.700e-8
Identity = 54/160 (33.75%), Postives = 83/160 (51.88%), Query Frame = 1 
Query:  928 LSRSGKHLLVSAYLASHNSRDTDRDMFTAK------STKRSKRQRSTRSSAGNAENLVEAGVQDLPEAREFQLERLLSIMSSIV--AVTEAGTKAAN---SMGSTELFAQIKSLTKLNLMRDCGQRKSFDLDCPSYRCNISRELAEAVAKEIGLDLSQYL 1374
            + R  K LLV+A+L SHNS + D+ MF  +        KR  R    R  A  AE  V+       + R F+LERL++    I   A  E G + A+    + S ++F QI S+T+L ++      +   ++   Y+CNISR+LAE +A+ +G+ L  YL
Sbjct:  307 IPRLTKFLLVAAFLCSHNSDEVDKRMFGGQIEGHVARAKRKDRNAQDRERAAAAEAAVD-------KRRVFKLERLIAWFHFITRSACDEHGAEVADLEEELLSADVFMQISSMTQLGML---SINRGSAMEGGLYQCNISRDLAERLAQNLGVHLDTYL 456
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: A0A090LYX4_OSTTA (Origin recognition complex, subunit 5 n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090LYX4_OSTTA)

HSP 1 Score: 66.6 bits (161), Expect = 7.370e-8
Identity = 50/154 (32.47%), Postives = 82/154 (53.25%), Query Frame = 1 
Query:  928 LSRSGKHLLVSAYLASHNSRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAGVQDLPEAREFQLERLLSIMSSIVAVT--EAGTKAAN---SMGSTELFAQIKSLTKLNLMRDCGQRKSFDLDCPSYRCNISRELAEAVAKEIGLDLSQYL 1374
            + R  K LL++A+L SHN+ D D+ +F  +      R   T  +AG  E    A    +   R F+LERL++    I   T  E G + A+    + S ++F QI S+T+L L+      +   ++   Y+CN+SR+LAE +A+ +G++L  YL
Sbjct:  360 IPRLTKFLLLAAFLCSHNNDDVDKRLFGGQIEGHVARTSRTDRNAGERERAAAAEAA-VDTRRVFKLERLIAWFHFITRSTCDEHGAEVADLEEELLSADVFMQISSMTQLGLL---SINRGSAMEGGLYQCNVSRDLAEKLAQNLGVNLPTYL 509
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: D7FZ80_ECTSI (Putative Mn/Fe superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ80_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.160e-6
Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 1 
Query:    1 VGAGGAGGAGNQWRGQDILTKLASLQGMVDSLTGFA 108
            VGAG   GAGNQWRGQDILTKLASLQGMVDSL GFA
Sbjct:  334 VGAGXXXGAGNQWRGQDILTKLASLQGMVDSLAGFA 369
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: UPI0014259990 (origin recognition complex subunit 5-like isoform X1 n=3 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259990)

HSP 1 Score: 62.4 bits (150), Expect = 1.390e-6
Identity = 46/144 (31.94%), Postives = 73/144 (50.69%), Query Frame = 1 
Query:  943 KHLLVSAYLASHNSRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAGVQDLPEAREFQLERLLSIMSSIVAVTEAGTKAANSMGSTELFAQIKSLTKLNLMRDCGQRKSFDLDCPSYRCNISRELAEAVAKEIGLDLSQYL 1374
            K+LL++AYLAS+N   TDR  F+    K  K      S+  N +  + +    L   + F L+RL++I  SIV    + T          +F+QI SL  L+L+  C       LD P Y+C +S +  ++VA+ +  D+ +YL
Sbjct:  320 KYLLIAAYLASYNPAKTDRRFFSKNHGKIKK------SACPNPKKDMSS---QLLGPKAFPLDRLMAIFYSIVDAKVSTT--------ANIFSQISSLVTLSLL--CHVGHDDQLDSPRYKCTVSLDFIQSVARTVSFDIIRYL 444
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: UPI000DC13D55 (origin recognition complex subunit 5 n=2 Tax=Aphidini TaxID=33387 RepID=UPI000DC13D55)

HSP 1 Score: 60.8 bits (146), Expect = 3.990e-6
Identity = 44/152 (28.95%), Postives = 72/152 (47.37%), Query Frame = 1 
Query:  922 LGLSRSGKHLLVSAYLASHNSRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAGVQDLPEAREFQLERLLSIMSSIVAVTEAGTKAANSMGSTELFAQIKSLTKLNLMRDCGQRKSFDLDCPSYRCNISRELAEAVAKEIGLDLSQYLV 1377
            L L    K+ L++AY+AS N    D+ +F   S K+ K  R          N  E     L   + F L+RLL+I  +I+          N+  +  L AQ+ +L+ L L+      K   LD P YRC++S +    +A+ +  +L++YL+
Sbjct:  291 LDLPYFAKYFLIAAYIASFNLPKYDKQLFVKASNKKKKTNRLV--------NKTENSTFQLVGPKMFSLDRLLAIFYAIIE--------ENTNMTANLLAQVNTLSDLGLLIRLSDGK---LDTPKYRCSVSFDCVNNIARTVNFNLNKYLI 423
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BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Match: A0A8C4C9J2_9TELE (Origin recognition complex subunit 5 n=3 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4C9J2_9TELE)

HSP 1 Score: 60.5 bits (145), Expect = 5.580e-6
Identity = 47/144 (32.64%), Postives = 67/144 (46.53%), Query Frame = 1 
Query:  943 KHLLVSAYLASHNSRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAGVQDLPEAREFQLERLLSIMSSIVAVTEAGTKAANSMGSTELFAQIKSLTKLNLMRDCGQRKSFDLDCPSYRCNISRELAEAVAKEIGLDLSQYL 1374
            K LL++AYLAS+N   TDR  F     K  K          N     E     L   + F L+RLL+I  S+V    A T +        +F+QI SL  L L+   G      LD P Y+C +S +  +A+A+ +  D+ +YL
Sbjct:  317 KFLLIAAYLASYNPARTDRRFFLKHHGKLKKT---------NFMKKHEKTSNHLLGPKPFPLDRLLAIFYSVVDNRVAPTAS--------VFSQISSLVTLQLLTQVGH--DDQLDAPKYKCAVSLDFIQAIARTLSFDIVRYL 441
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FZ81_ECTSI2.910e-17991.53Similar to origin recognition complex, subunit 5-l... [more]
A0A6H5K0F2_9PHAE1.860e-6787.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7M5X478_9CNID6.520e-934.03AAA domain-containing protein n=1 Tax=Clytia hemis... [more]
A0A0N5CU16_THECL7.450e-933.55Uncharacterized protein n=1 Tax=Thelazia callipaed... [more]
A4RUG0_OSTLU3.700e-833.75AAA domain-containing protein n=3 Tax=Ostreococcus... [more]
A0A090LYX4_OSTTA7.370e-832.47Origin recognition complex, subunit 5 n=2 Tax=Ostr... [more]
D7FZ80_ECTSI1.160e-688.89Putative Mn/Fe superoxide dismutase n=1 Tax=Ectoca... [more]
UPI00142599901.390e-631.94origin recognition complex subunit 5-like isoform ... [more]
UPI000DC13D553.990e-628.95origin recognition complex subunit 5 n=2 Tax=Aphid... [more]
A0A8C4C9J2_9TELE5.580e-632.64Origin recognition complex subunit 5 n=3 Tax=Denti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:98612..107172 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score524.6
Seed ortholog evalue4.3e-146
Seed eggNOG ortholog2880.D7FZ81
Preferred nameORC5
Model size1840
KEGG koko:K02607
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG ModuleM00284
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000082,GO:0000166,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000808,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005664,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006267,GO:0006270,GO:0006323,GO:0006325,GO:0006342,GO:0006355,GO:0006725,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007062,GO:0007064,GO:0007076,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009743,GO:0009744,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0030261,GO:0030466,GO:0030554,GO:0031261,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031935,GO:0031938,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033043,GO:0033044,GO:0033260,GO:0034285,GO:0034622,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036387,GO:0036388,GO:0040029,GO:0042221,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0060968,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0098813,GO:0140014,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1901700,GO:1902275,GO:1902292,GO:1902299,GO:1902315,GO:1902679,GO:1902850,GO:1902969,GO:1902975,GO:1903047,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141
Exons10
EggNOG free text desc.DNA replication origin binding
EggNOG OGsKOG2543@1,KOG2543@2759
Ec32 ortholog descriptionOrigin recognition complex, subunit 5
Ec32 orthologEc-13_002760.2
Cds size1305
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko03032
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.834.1prot_Ecto-sp6_S_contig102.834.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig102 99066..107091 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348736.0520165-UTR-Ecto-sp6_S_contig102:98611..990651682348736.0520165-UTR-Ecto-sp6_S_contig102:98611..99065Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig102 98612..99065 -
1682348736.1522408-UTR-Ecto-sp6_S_contig102:107091..1071721682348736.1522408-UTR-Ecto-sp6_S_contig102:107091..107172Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig102 107092..107172 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348736.0635076-CDS-Ecto-sp6_S_contig102:99065..991471682348736.0635076-CDS-Ecto-sp6_S_contig102:99065..99147Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 99066..99147 -
1682348736.0720353-CDS-Ecto-sp6_S_contig102:99849..999291682348736.0720353-CDS-Ecto-sp6_S_contig102:99849..99929Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 99850..99929 -
1682348736.080978-CDS-Ecto-sp6_S_contig102:101724..1018561682348736.080978-CDS-Ecto-sp6_S_contig102:101724..101856Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 101725..101856 -
1682348736.089629-CDS-Ecto-sp6_S_contig102:102499..1025971682348736.089629-CDS-Ecto-sp6_S_contig102:102499..102597Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 102500..102597 -
1682348736.098337-CDS-Ecto-sp6_S_contig102:103119..1033021682348736.098337-CDS-Ecto-sp6_S_contig102:103119..103302Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 103120..103302 -
1682348736.107813-CDS-Ecto-sp6_S_contig102:104190..1042531682348736.107813-CDS-Ecto-sp6_S_contig102:104190..104253Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 104191..104253 -
1682348736.116993-CDS-Ecto-sp6_S_contig102:104664..1048031682348736.116993-CDS-Ecto-sp6_S_contig102:104664..104803Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 104665..104803 -
1682348736.1257772-CDS-Ecto-sp6_S_contig102:105226..1053761682348736.1257772-CDS-Ecto-sp6_S_contig102:105226..105376Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 105227..105376 -
1682348736.133964-CDS-Ecto-sp6_S_contig102:105899..1062491682348736.133964-CDS-Ecto-sp6_S_contig102:105899..106249Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 105900..106249 -
1682348736.1425045-CDS-Ecto-sp6_S_contig102:107063..1070911682348736.1425045-CDS-Ecto-sp6_S_contig102:107063..107091Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 107064..107091 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig102.834.1

>prot_Ecto-sp6_S_contig102.834.1 ID=prot_Ecto-sp6_S_contig102.834.1|Name=mRNA_Ecto-sp6_S_contig102.834.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=435bp
MVDSLTGFAGEEAPLTATGGGGGGGGGGGSGQDPHSNASNISAAHLPSQS
TPFGRHHHHHHHQHQEQGQPRLPPICPILISQNGFFASEIMGGRGGGGDW
RGAGGRNRSLVMNAYPVQVRFPPYTKEHLPSVLASTAHMFGLDLNVNLRD
GGGGGGGGSAEGGGESGRKRRVRGNDEGRKLFRKMATALVTTLQNETRDA
WELGAEAARIWPAYKRSAEDGCYDAHLAAALKPLLTETTKRLHGFGRQDD
DKRQNQNNNGKDKRGRNGDAKKEGRVKPNGLGLSRSGKHLLVSAYLASHN
SRDTDRDMFTAKSTKRSKRQRSTRSSAGNAENLVEAGVQDLPEAREFQLE
RLLSIMSSIVAVTEAGTKAANSMGSTELFAQIKSLTKLNLMRDCGQRKSF
DLDCPSYRCNISRELAEAVAKEIGLDLSQYLVTA*
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mRNA from alignment at Ecto-sp6_S_contig102:98612..107172-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.834.1 ID=mRNA_Ecto-sp6_S_contig102.834.1|Name=mRNA_Ecto-sp6_S_contig102.834.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8561bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:98612..107172- (Ectocarpus species6 EcLAC_371)
GTCGGTGCCGGGGGGGCGGGAGGCGCGGGAAACCAGTGGCGAGGCCAGGA
CATCCTGACCAAGCTTGCTAGCCTGCAGGGCATGGTCGACTCCCTCACGG
GCTTTGCCGGTGGGTGACGCCTGACCCTAACGCCTTGCAACGGTCTCGGT
GTCTTTGGTGGTCTTTTATCTGCCTGACGTCGATGGCTGCTTGCTGAAGG
GTTCGGGATCTTGCAACTGGTGCTGGTGCTGCTGGTGCTGGTGCTGGTGC
TGGTGCTGCTGGTGCTGGTGCTGGTGCTGCTGCTGCTGGTGCTGCTGCTG
GTGCAGCAGCTCCTGCCAGTAGCGTGTCGTGGAGTGTCCGGCCGTACGCA
CCGGCCATGCGTACGAAGCATGAAAATACATGTTAGGAGAGACGCATGTC
AGCGGTTGGTTGTGTAGCTAGCGCGCTGAGTTTTTTTCCGAAACGTTTAT
CATGTTGCAGGGTATGTGAGATTGGATGGGGCACCGCAGGTGACAAGATA
ACCTCTTTGCTCTTCCCACACCCCTCACCTCCTCACCCACGGGGCCCTTC
TTTTCGTTCTTGATTAAAGAGTCTTACTGAGAAACTCGTGTGAAGCGAAG
CAAACGCAAAACATCAATAATCGGATGTCTTCTTGGTGCAGGACTCCCCG
ATGCCACCGCTGAGTGGCTGCACCGCTCCTTCCATATCGCGCTCTTCTTA
CTGTCCATGTGGGCGGACGACGTCAACCTTCCAGTCAATCTCTCGCCCCC
CTCCAGGTTCAGCTATCCCCCCCCTCCCCCATTGGTCTAACGAGTAATAA
GCCTCCCTCCACAACAGCACGAGTTTCATTGCTATCTCATCCTCTGGACT
CTTACTCTGTGGTCTGGGGATAAACATGATTAATCTTTTTTTAGGAGCCA
ATCGAACACACCCACGCATGCAGGCGAAGAAGCGCCACTAACGGCTACCG
GCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGTGGCCAAGACCCCCAC
TCCAACGCGAGCAACATCTCGGCCGCACACCTACCGTCACAATCCACACC
TTTTGGAAGACATCACCACCACCATCATCATCAGCACCAGGAGCAGGGGC
AGCCCCGTCTTCCCCCCATCTGCCCAATCCTGATATCTCAGAACGGGTTC
TTCGCGTCGGAGATCATGGGGGGTCGGGGGGGCGGCGGCGACTGGAGGGG
CGCCGGGGGTAGGAACCGATCCCTGGTGATGAACGCGTACCCCGTACAAG
TCCGATTCCCGCCGTACACGAAGGTGGAGTGCACGCGTTGATTTTGGTAC
CCGATAGCGACGAAATGTGTCATACCCCCAGGATTGATTTTCAACTCCGA
AGCAGAGAGAGAGAGAGAGAGAGAGAAAGATTGGCGGTGCGGAAATGGCA
TCGTTCGGAACCGTATTCTCTCGTCGAGAGCCTTCCGAAAACGTGTGCAT
GTGTCACATCCTCTTCTTCGCGTAGGAACCGAGGTTCGAAAATCGGCCCA
AGGGGGGTGTGTGGTTTCTTGTGTCAACCCACGGTAGGCGTGCTCCCTAG
TCGCATGTCTTGTGTGCTGGTTCTGTTGCGCGAGGGAACCCGATGCAGTA
GAAGAGAAATACGCGGTGACCAAAAAAGGCCACCTGAAAATGCAACTCTC
CGAGCGTGCGTCGTGATTGGCCCACCTCTCCTTTCGATTACATACAGCCT
GGACACTTTTCAGTCCGCTTGTGCAACCGATACGACTGAATCCCAGCCTA
ACCGTTGCGTGTTTTTGTTCGGCCATCCACACCCAACGGCCCGCAGGAAC
ACCTTCCCAGCGTGCTCGCGTCCACGGCTCACATGTTCGGGTTGGACCTG
AACGTCAACCTGAGGGACGGCGGCGGCGGCGGCGGCGGCGGAAGCGCGGA
AGGCGGAGGGGAATCGGGGAGGAAAAGACGCGTGCGCGGCAATGATGTAA
GTTTTTGTGTTGCTGTGGGTGTTGTTGGTTCTCCCGTCTCTTTTCGTGCT
CTGTAGCTTCCGCTCGCCGTTTTCGTTGTTCGTGTGTGTTGGTGTGTGTT
GGTGTGCTCCGTCTTTTAACGTTCGGCCTGTTGACGAAAACCTGGGTGAA
TCGCCTCGGTTTCGTGTTGCCGGTGCTGCCACCGCTGGCCTTCCGCCTCT
CTGCGTGCTCTGCCGCTTCCGCTCGTGTCGCTTTTTTCGTACTGTATGTA
TTGGGGTGCTCCGCCTTTTAACGTCGAACCCGTTTGCTGAGAAACCCGCC
GCCAAAGGCCTCGGCTTTCGGGCCGATAGGGAGTCACACCCACAGTTGTA
CACACCTCCCTTCCTACCCTCAACTCTTTTGGCGGTGCTATTTTTGGTCG
ATTTCCTCATGTGCCCCAGGAGGGCCGGAAACTGTTCCGAAAGATGGCGA
CGGCCTTGGTGACGACCCTCCAGAACGAGACGAGGGACGCTTGGGAGCTC
GGGGCGGAGGCCGCGAGGATCTGGCCGGCCTACAAGCGGTCCGCCGAAGA
CGGCTGCTGTGAGATCGCCGTTGTTGTTGTTGTTGTTGTAGTAGTAGTAG
TAGTAGAAGTTACTGTAGTTGTTGTCATTGTTGGTACAGTCGGTCGGGGT
GCCGATGTGTGTTCATGTGCTGATGCGGGGAGCATCTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTCGTAGAAATTACTGCTGTGGTTGTTGTCGTTGTT
GTTGCAGTCGGTCGGGGTGCTGATGCGTGTTCATCTGCTGACGCTGGGAG
CATCTGCTGACGCTGGGAGCTTGTTGTTGTTACTGTTGTCGTTGGTGGTG
GTGGCAGACGGGGTGCCGACATGTATGCATAGTCTCGGTCTCATTCTTGC
TCTTCGCCCGTCGTTTTTCTCCTTCTTGTGCACCCTCTGCTTGTTCTGTG
TTTTGGACACGTTTTCCAGACGACGCTCATCTCGCCGCCGCCTTGAAGCC
TCTCCTGACGGAGACTACCAAACGCCTGCACGGTGAGCATGTTTTTTTAC
AGAAACACGACGATTAACAGCTGTGGTTCTTCTGGATGCTACTGACTGAG
GAAGGTCCATGCATTATCCAGTCCCCCCAAGAAGGGGCTGTCCCCTGCTT
TATCCTTGAATCGGGAGTTAGATCTCCCGCACCGCACCTTCCCCTTCCGA
ACTGGCCCGCACTGCCGTTAATACTTCTTACATTCAAATTCCATACATAC
CAGCTTCCATAGAGAACCAAGACCCTGAAAGCCGCCGAGAAGGTTGATTC
TCCCCCCGGCGACGAAACAAAGGGAGCAATAAATCAAAGAGAGAGGAGTG
CTGTCACGCCCTATATGGTATTTGTTTGCCTCTTCGGACCTTGGAACTAG
AGTGTGCTGATGTGGCGAGCGAGCGAGCCGCGCGTGGTCGTCGCCTCGAC
CAATCATTTCCGTAGCACGGCTAGCTGGACTGACCACGCAAAGAAAGTAA
GGTTTTAAAATAAAGAAGCTCAGGGAAGGGGCACTCACACTCTTGCCCTA
ACCTTAACCCTCACCCCAATATAGCCGATTGTATACTTTGTCCAGTATGT
TTTCTCACGTAGGGAAAAGCCTGCGTAGACCACTGAGCCAGCTCCATAGA
AATACCCCGGAGCGCATGGTGCCGGCCCTGTAAGCATCGCCTATTTTCAA
CAAAGCCCAAAGCTTTGTTCAAGCTGTAAACGAATGGGTCCTGTCATTCG
CACAGTTTTTCTGCCGTCGCACATGTATGTTTGCATATTTGTTTTCTCAG
TACTCCAACAGAGTCTCGATTTCTCGTGAAGGTGTTTCGCCCGATTGATC
CGGCACTGTATTGTCTGGTTCGTTTTACATTCTCAGCGATAACGCCCACG
ATGCCTAACAACAAGGACAGGTTTCGGACGCCAGGACGACGACAAGCGGC
AGAACCAGAACAACAACGGCAAGGACAAGAGGGGGAGGAATGGCGACGCG
AAGAAGGAGGGCAGAGTCAAGCCGAACGGCCTGGGGCTCTCCCGGAGCGG
GAAACACCTCCTGGTATCGGCTTATCTGGCCAGCCACAACTCCAGGGACA
CAGGTAACGGGAAGGGAGCAACCACAAAGGGTCAGGGCTTGTATTCGGTG
TTGGCAATGGCAAGGGCAAGATGTAATGGTTTTTTGATTGTGCGTGTGCC
AACGTTTTCGAGTTGGAATGCGGTCAGGCGTTGCGAGTTGGGGTGCGGGC
TGTCTTGTTTGAGGATTTTTTGTAGGGTAGTCGTGCAAGAGTTTCGAACC
GCAAGTGGGACCATGGCGATGGGTGGGGCTGGGTAGCCCCACCTCGGTTG
GCCACATCTCCGGATACCACGCTACCGTGCCGGGGGAGAGGGAGAGGGGG
GTACGCGGATTGGAGGACGTTTTGGCACCCCAAACCCTCGTGCACGTGGA
GCTCCTCACGCCCGCGAGTTCTGAGTTTTGCCTATCTACGTTTTTTTTTT
TTTTTTTTTTGGCATGGTTGCCTCCCCCCCCTTTTTTTTTCGCGTCGGCG
TGTCCCTCCCCGACCCACCTCTACCTCTCTCTCTCTTTGTCTGGCGTTGT
GCTCTTCGTTTGTGATGTTGTGCAGATCGCGACATGTTCACTGCCAAGAG
CACGAAGAGATCGAAGCGACAAAGGTCGACGAGATCAAGCGCCGGAAATG
CGGAAAACCTCGTGGAGGCCGGGGTGAGGATTGACCAAAGCCGCAATAGC
CGGGGCGGGTGTGTGTGTGTGGGGTACCCCGTCTCACGAAGTCGGGGCTG
TAGGTTTTAGGCCGGAGGATTGGGGTCTTGCCGAGATAGGTGTAGCGGGA
ATTCGTGTGTACGCTTCTCCTTAGGGTTGTGGTCCTGCTCCGGAATGGCG
ACCAAGTTTTTTCGCCAAAGGACAGTGCTCGCCCCGTCTTGCTTGATCGG
AGCTGTTTTTTTATGTGCAGAAAACGAGCCTCTTGCTATCGAATGCACGC
CAAATTTCAATGGAACGGACATGCTTCGTCGTTGATTGCTGTTGTTCTGC
GTTTTTGCTCGCGGATCGCTGAACACTTGAGGTATGCCATGATTTGTGGC
CGCCAGTGGCGTTGGCGGTCAACAACGGCGCAGTCTACCGCCGCCTCGCC
GTACCTCTGTCTTATCTTCTCCCCTGTTTCCGTTCGTCTGTCTGTCTGTC
TGTCTGTCTGTCTGTCTGTCGCTCTCTCTCTTCCCGCCCCATCCTCTGTC
GTCATGTCTACCTCACTATCTTTTCTATTGCCATGTTCTTTCTCTCTGCC
GTGGTGACCTTACGCTCTACAAAACTTTCTCCTGGCCCACCGCAACTGTG
CCCCCCCCCCCAACAGGTGCAGGACCTGCCGGAAGCGAGGGAGTTCCAGC
TAGAGAGGCTTTTGTCGATCATGTCCTCCATCGTGGCCGTTACCGAGGCG
GGAACCAAGGCCGCCAACAGCATGGGAAGCACGGAGCTCTTCGCGCAGGT
ACACCAGTCACAATCATGAGCAGACCGCTCTCTCATTTTAAGGACACAAA
TTTTGTGCTGATTTTCCGCAGCTCATCAGCCAAACGATTTCTGAAGGCTT
GAGAGATGGGGCAACCAATTGTTGTTTTCTTTCACGATGTTTGTAGGTGT
TAGTGTTTGTCCGCAGGACCTAGAACCGAGGGGGAGACCGTGGGATCATA
TCCAACATACCTCACAGGTCAAGTGTTAGACTAGTACCGACAGAAGAAGG
TACTGAGTAGAGAGCAGAGAGATCGGAGCGGTTTTCAACGTGAAGACGAC
GACAATAACAACAACAACCTCATCATACACAGTTAGGTCTGCGGAGGGGG
GATCTGCTTCGCGGGAAAATTATTTGTTGTCCTTAGCCGAGCAAAAATGC
CCCGGTCAAGGGTGTCCTTTCGGCGAGGATCGGCTGTGCTCGTGCACCAA
CGGATCCTGCTTTTCTGAGCCCGCGGCGTTCGCAGCAGCGCAGCGTCAAC
ACCCTCGCTTCTCGCTGTAGCCTTGTCCTCAACCTGGTCGGAGGAGTCGC
TACCAGCAGTAGCTTTGGAGCATTAGACATACCAGAAATGCGCCAAAAAT
CGACTGTCTCTATCCAAACGGAGCAAATTCGAGCCTTCCTAAGCTAAGAA
CTTATCAATGGAAATAGGTCTGCTTTGTGTTTGTCTTTGGCATTTTTTTT
TTCAGTGTTGGGGACACAATATCTACCGTAGGTGGCATGACGTAAGATAT
TACCCCCCCTGGGTCGGTATTCGAAGCTCGATTATTCGGCAGGAAGAGCA
GTGACGGTGCCGAAAACGGTGGGGTTGGAACCGTCTCGTCGGAAGCTTTC
CGAAAACGCATAATTTAATTTCGGCATCCTCTTCGCCGTGGAGAAGTCGA
GCTTTGAAAATCGGTCCAGGGGGTGTGATATCTTGTGCAACCCACGGTAT
TGAGTTGATACACGGTGGAATGTGCCACGTGTCCGTCGTCCGCTTGAAGG
GGCTTGTGATGTGCGTATCATCATGCTTCCGAGGATTAGAAGAGGTGAAA
TTCAGAGAGAGACGAGAACGAGAATTACAGAAAGGGTAGGTATATCAGAT
AGATGGATACATCTATATATATATACATAAAGAGAGAGAGAGAAAGAGAG
AGAGAGATCTGGCGCGAGCGGATACCAAAACCATCCTCATGGCATCCGGA
AACCGTTTACGCTGGGACAATTTTTTCGTTCTGGATTAATCGATACACGT
GAATGCGGCTTTATAATGTCACCGATAGCTTGATGACTGCGGGCGGCAAA
CCCGTCTATCGTTGTGCGCAGTGCACCGCGAGATGGTCTGTATCGAGAGC
TGTACACCACAGCAGCTCTACTTCGGCACGCTACGCTTGACTCACTTCCA
TATGTCTGACCGCATTCGTCGTGGACTTTCACAATGAACTTGAGAGAGGC
CGCGAAACCCGTGACGCTCGAGGCGCCCCCCCATCAACCGTTCCTTGGGT
CCATTACTGCCAGTATGGGAGGATGCCATTTTAGACGGTAAATATGCTGA
CATTTTCCGCCGATTGGACTACTGCAGTAGTGGAAGTGTTTGGTTCCTTC
GACCAGCACCGGCTGCAGGCACTTCCAGCGACCGGTGCACCAACTTTGTG
TTGCGCCTCATGGTTCATGATACACGGTTTCATTCAACTTTCCGCGCAGG
CACCGTCGCGAGATGGCTGCCGTATTACAGTAGAGTAACCTAGTTTGTGC
TGCCCTCGCCCTTCCCTGCTGTCCTCTTCTTTCGGAAACAAAGATCAAGT
CGTTGACGAAGCTTAACTTGATGAGAGACTGCGGACAGCGGAAGAGCTTT
GACCTGGACTGTCCGAGCTACAGGTATGCGCTCGCCTTGCTCTGGGTGTA
AGTTGATGCGTCCACAGGACCTCTGCTGCGCGTCTCGTCGTGGTCCAGCC
AGGCTAAGAAAGCAAAGCTCCCACGGCAACGGGTTGGTCACCCTTCTTGT
GCGCACTCAAGGCACACGCCCGGTGCAAAGGTCGGGGGCGCACGCTCATT
CTCAAGCACGCCAAACGTTACCCGTTCGTACGAGCAAGTCACCGCCGTCT
CTTACATGTCGCGGTGTGATGCTCTTGATCGGGCGCACCCCGACAATTCA
CGACCGCGCCGCCGAAAGGGATACGACTTGTACCGAATACCCAGTACCGT
AGGTTGCATGAGCTTCCACGCCTTCCCTTTTTGACTGTTTCTGAAATATC
GATAGCTCCTCGACGACAACGATGCCACAACAGTCGACGAACTGGCAGTT
CCGACCCCGCCGTTGCCGGCACCGTGATTGCTGATTTTGCTTACAGAGCA
CTCGAGCTCTTGACATAGGTTCAGGGCGTGTGGTGTCTTTCGCAAAATTG
CGGTAGACTAGTGCTGAACCGGCGTGAGCGGTGATGTGTACGGTGTGTCC
ATTTTTGTCCTCCTCCTTCTCTGTGCGTCGTCGTGTTTTCAAACCGTTGG
CGTCCTGCTGTCGAACGTCGACCCTTTTTTCCTGCCGCGTGCCTCCACAA
ACACCCGCGTGTTGCGTCGCGCCAGGTGCAACATTTCCAGAGAGCTGGCG
GAGGCCGTCGCGAAGGAAATCGGCCTCGACCTGTCGCAGTACCTCGTCAC
GGCGTAACCAAACCGGACCGCGAGTTCTAGTAAACTTCCGGCTCCAGTGC
CGACGTCACGAGGACAGATTGACGGCTTTGTGGGAGTACCGTCAGATTCC
TGGCTCCAGTGGTGTCGAAAAGTGGAATGCCGGTGGACGGTTTGCTGAGG
AGTATCAGGAGATTGACGGCCGGGAGATTCCTAGCTCCAGTACTACTGAA
GTGTCGGAAAGTGGAATGCCGGTTGACGGTTTGCGGAGGAGTACTAGGAG
ATCCCGGGCTCGAGTAGTGTTGACGCTGTATACGAAGGTGGAGATATTTT
GGCGAATCCGAGGAGCACTAGGGGACTCCTGGCTCCAGCGGTATCGTGGA
ATACCGATTGACGGTTTTTGATTGACGCTTAGCGGAGGATTACAAGAATA
TCCCGGGCTCGCAAGTAGCGTCGAAGTTAGGAACACCGATTGACGGATCG
CGGACGAGTGT
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:98612..107172-

>mRNA_Ecto-sp6_S_contig102.834.1 ID=mRNA_Ecto-sp6_S_contig102.834.1|Name=mRNA_Ecto-sp6_S_contig102.834.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1305bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:98612..107172- (Ectocarpus species6 EcLAC_371)
ATGGTCGACTCCCTCACGGGCTTTGCCGGCGAAGAAGCGCCACTAACGGC
TACCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGTGGCCAAGACC
CCCACTCCAACGCGAGCAACATCTCGGCCGCACACCTACCGTCACAATCC
ACACCTTTTGGAAGACATCACCACCACCATCATCATCAGCACCAGGAGCA
GGGGCAGCCCCGTCTTCCCCCCATCTGCCCAATCCTGATATCTCAGAACG
GGTTCTTCGCGTCGGAGATCATGGGGGGTCGGGGGGGCGGCGGCGACTGG
AGGGGCGCCGGGGGTAGGAACCGATCCCTGGTGATGAACGCGTACCCCGT
ACAAGTCCGATTCCCGCCGTACACGAAGGAACACCTTCCCAGCGTGCTCG
CGTCCACGGCTCACATGTTCGGGTTGGACCTGAACGTCAACCTGAGGGAC
GGCGGCGGCGGCGGCGGCGGCGGAAGCGCGGAAGGCGGAGGGGAATCGGG
GAGGAAAAGACGCGTGCGCGGCAATGATGAGGGCCGGAAACTGTTCCGAA
AGATGGCGACGGCCTTGGTGACGACCCTCCAGAACGAGACGAGGGACGCT
TGGGAGCTCGGGGCGGAGGCCGCGAGGATCTGGCCGGCCTACAAGCGGTC
CGCCGAAGACGGCTGCTACGACGCTCATCTCGCCGCCGCCTTGAAGCCTC
TCCTGACGGAGACTACCAAACGCCTGCACGGTTTCGGACGCCAGGACGAC
GACAAGCGGCAGAACCAGAACAACAACGGCAAGGACAAGAGGGGGAGGAA
TGGCGACGCGAAGAAGGAGGGCAGAGTCAAGCCGAACGGCCTGGGGCTCT
CCCGGAGCGGGAAACACCTCCTGGTATCGGCTTATCTGGCCAGCCACAAC
TCCAGGGACACAGATCGCGACATGTTCACTGCCAAGAGCACGAAGAGATC
GAAGCGACAAAGGTCGACGAGATCAAGCGCCGGAAATGCGGAAAACCTCG
TGGAGGCCGGGGTGCAGGACCTGCCGGAAGCGAGGGAGTTCCAGCTAGAG
AGGCTTTTGTCGATCATGTCCTCCATCGTGGCCGTTACCGAGGCGGGAAC
CAAGGCCGCCAACAGCATGGGAAGCACGGAGCTCTTCGCGCAGATCAAGT
CGTTGACGAAGCTTAACTTGATGAGAGACTGCGGACAGCGGAAGAGCTTT
GACCTGGACTGTCCGAGCTACAGGTGCAACATTTCCAGAGAGCTGGCGGA
GGCCGTCGCGAAGGAAATCGGCCTCGACCTGTCGCAGTACCTCGTCACGG
CGTAA
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