prot_Ecto-sp6_S_contig100.751.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig100.751.1
Unique Nameprot_Ecto-sp6_S_contig100.751.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length539
Homology
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BLAST of mRNA_Ecto-sp6_S_contig100.751.1 vs. uniprot
Match: D7FRM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRM1_ECTSI)

HSP 1 Score: 439 bits (1128), Expect = 8.530e-149
Identity = 295/481 (61.33%), Postives = 301/481 (62.58%), Query Frame = 0 
Query:   58 MSVSGSKPAFSPKPPPQXSPQGGLAKQGVSAQDALVGSNRIEPAVDIGKGSTATAAPMAKTKPLLRKTLPVPVLEVSIVREKRISGGPFKQDGVASAAVDAETTSVAATAREPAAGGGGADRIGFRQLLSTKKPEQQLLRSGSAPDPPTTTLRIASKMTTGVPTYQLAEVRPHLLPGRGKVECAPSELKVDFAGTTRGCWGESRDSIVPVGAVSRSQDGIAPTSGNTAAKPTAAKVLPLLSPEQDLTDKGVGKLKQRLAPLHRRKSDVDGRFRRRSRNLSSAQRKPASSGQAPSLARRRSTTPDASRPSTTSNTNTAREGVPSSRTSFSSETATDPGADQAQLKARLRVMEWKRRRAEELESQQEEQATQEHRKQVEAETEAARXXXXXXXXXXXRRILAERNNSADAVRASEAAERWAKASRERERRRAEIYAINAVMRAAFEKDFKAYSLEQEKRVTQAAAPDVPDLQPAVDNVTPPRQ 538
            MSVSGSKPAFSPKPPPQ SPQGGLAKQGVSAQDALVGSNRIEPAV+IGKGSTATAAPMAKTKPLLRK LPVPVLE                                                                                                        ++ C                                                    VLPLLSPEQ+LT KGVGKLKQRLAPLHRRKSDVDGRFRRRSRNLSSAQRKPASSGQ PSLARRRSTTPDASRPSTTSNTNTAREGVPSSRTSFSSETATDPGADQAQLKARLRVMEWKRRRAEELESQQEEQATQEH            XXXXXX     RRILAE NNSADAVRASEAAERWAKASRERERRRAEIYAINAVMRAAFEK+FKAYSLEQE RVTQA+APDVPDLQPAVDNVTPPRQ
Sbjct:    1 MSVSGSKPAFSPKPPPQPSPQGGLAKQGVSAQDALVGSNRIEPAVEIGKGSTATAAPMAKTKPLLRKPLPVPVLE--------------------------------------------------------------------------------------------------------RLNCP------------------------------------------------RRSVLPLLSPEQELTGKGVGKLKQRLAPLHRRKSDVDGRFRRRSRNLSSAQRKPASSGQEPSLARRRSTTPDASRPSTTSNTNTAREGVPSSRTSFSSETATDPGADQAQLKARLRVMEWKRRRAEELESQQEEQATQEHXXXXXXXXXXXXXXXXXXAEEAERRILAEHNNSADAVRASEAAERWAKASRERERRRAEIYAINAVMRAAFEKEFKAYSLEQENRVTQASAPDVPDLQPAVDNVTPPRQ 329
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRM1_ECTSI8.530e-14961.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 434..461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:494519..497865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.751.1mRNA_Ecto-sp6_S_contig100.751.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig100 494345..498503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig100.751.1 ID=prot_Ecto-sp6_S_contig100.751.1|Name=mRNA_Ecto-sp6_S_contig100.751.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=539bp
MTLISLRWSSASNRVPTRGAGRARAASQRSLSNSNVPARRQEKPRDISTS
RWRLSRSMSVSGSKPAFSPKPPPQPSPQGGLAKQGVSAQDALVGSNRIEP
AVDIGKGSTATAAPMAKTKPLLRKTLPVPVLEVSIVREKRISGGPFKQDG
VASAAVDAETTSVAATAREPAAGGGGADRIGFRQLLSTKKPEQQLLRSGS
APDPPTTTLRIASKMTTGVPTYQLAEVRPHLLPGRGKVECAPSELKVDFA
GTTRGCWGESRDSIVPVGAVSRSQDGIAPTSGNTAAKPTAAKVLPLLSPE
QDLTDKGVGKLKQRLAPLHRRKSDVDGRFRRRSRNLSSAQRKPASSGQAP
SLARRRSTTPDASRPSTTSNTNTAREGVPSSRTSFSSETATDPGADQAQL
KARLRVMEWKRRRAEELESQQEEQATQEHRKQVEAETEAARKLAAARAEE
AERRILAERNNSADAVRASEAAERWAKASRERERRRAEIYAINAVMRAAF
EKDFKAYSLEQEKRVTQAAAPDVPDLQPAVDNVTPPRQ*
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