mRNA_Ecto-sp6_S_contig100.750.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.750.1
Unique NamemRNA_Ecto-sp6_S_contig100.750.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: A0A6H5K5X7_9PHAE (MRG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5X7_9PHAE)

HSP 1 Score: 533 bits (1374), Expect = 2.040e-183
Identity = 289/299 (96.66%), Postives = 295/299 (98.66%), Query Frame = 3
Query:   57 MTKTAKDKKGASSNKNKFKADDKVYAMDSGDLYEAKVIKFKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXXKARVDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQQAARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYEDEEPEEPQTA 953
            MTK AKDKKGA+SNKNKFKADDKVYAMD+GDLYEAKVIK KPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXX +ARVDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRE+TAA+VMAQYM+SKANRGTPQQ ARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYEDEEPEEPQTA
Sbjct:    1 MTKIAKDKKGAASNKNKFKADDKVYAMDNGDLYEAKVIKLKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXKRARVDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPREVTAADVMAQYMDSKANRGTPQQTARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYEDEEPEEPQTA 299          
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: A0A836CM09_9STRA (Putative chromatin binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM09_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.530e-69
Identity = 146/303 (48.18%), Postives = 201/303 (66.34%), Query Frame = 3
Query:   57 MTKTAKDKKGASSNKNKFKADDKVYAMDSGDLYEAKVIKFKPSGE-QFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKD--KKKKAKVNAAKRKE------------DQXXXXXXXXXXXXXXKARVDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQQAARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEY 920
            M +TA +K+G      K+  +++V+  D G LY+A+++K K + + +  YF+HY+GWNSRWDKW  E +LM  GPE+ E+Q++LKD  K+++    AA RK               XXXXXXXXXX    K R+D K  TEDDS + ++K+ +PFTLK+QLV DWE+VTQEPR L+ LPR  TAA+V+  ++ESK    T  Q AR +EL+DG+R+YFD+ALPLILLY  ER  +   V    G++ SE+YGAEHLLR+F +LP LLAQ+ L   EV Q+Q  L +FL++MQKN    F  +Y
Sbjct:    1 MGRTAAEKRGP-----KYSQEEQVFVQDDGLLYKARIMKLKQTDDGKHHYFVHYLGWNSRWDKWSEEQELMPDGPESEELQKRLKDEIKQRQGAPKAAVRKSISGGGXXXXXXXXXXXXXXXXXXXAARKKPRIDTKAATEDDSELAQIKLPIPFTLKRQLVQDWENVTQEPRCLLPLPRARTAAHVLDAFIESKRGACTAAQLARFRELVDGLRLYFDRALPLILLYAHEREHHAAVVAHNKGRAASELYGAEHLLRLFTKLPALLAQTNLNSNEVGQLQAKLGEFLKYMQKNAGELFHGDY 298          
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: A0A4D9CY10_9STRA (MRG domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY10_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.120e-56
Identity = 127/304 (41.78%), Postives = 172/304 (56.58%), Query Frame = 3
Query:  108 FKADDKVYAMDSGDLYEAKVIKFKPS--GEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXXKARV---DVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQ--QAARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKS--------------------PSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYEDEEPE 938
            FK  + V A DSG LYEAK+ K +    G    YF+HY GW S+WD+WV   DL+     +L++Q QL+   K+     A++++ +               +R    D++   E +S   +VK+AMPFTLKKQLV DWE VT+ P  LV LPR  +AA V++ ++  K  +GT    Q AR +E++ G+R YFDKALPLILLYR ER QY       P  S                    PS++YGAEHLLR+FVRLP+LLA + L P E+TQVQ  L + L+F+QK H   F+  Y  +E E
Sbjct:   48 FKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQAAKRRPGPVAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSD-PQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLAHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAAPPSSACRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSYMKKEEE 350          
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: A0A7S2RY99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY99_9STRA)

HSP 1 Score: 195 bits (495), Expect = 6.500e-53
Identity = 111/266 (41.73%), Postives = 159/266 (59.77%), Query Frame = 3
Query:  126 VYAMDSGDLYEAKVIKFKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXXKARVDVKKDTEDDS-GVTEVKVAMPFTLKKQLVTDWEHVTQ-EPRRLVKLPRELTAANVMAQYMESKANRGTPQQAARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQE 917
            V  +D G LY AKV +    G+   YF+HY GW+ +WD+WV  S L+  GP A +M ++L  ++++ +  AA+ K +               KAR+D ++D E  + G  E+K+ +PFTLKK+LV DWE +TQ  P ++V LPR      ++ +Y+ESK  R + Q   R  EL  G+R YFD ALP+ LLYRQER QY   VQ  P  + SE+YGAEHLLR+F +LPQ+L ++ L   E  Q+Q  L +F ++MQ+     F QE
Sbjct:   42 VRTLDQGRLYPAKVRRVGQDGQ---YFIHYQGWSKKWDRWVHCSLLLKEGPAADKMSKKLMAEEQQRQETAARLKRE---ARADEKSSQEKKKARIDHQRDVEAPAQGTFELKLPLPFTLKKKLVEDWERITQTSPGQVVPLPRTPCVKGIIDEYLESKKERSSSQNHQRLTELFGGLRTYFDAALPITLLYRQERAQYYQYVQDHPDATMSEVYGAEHLLRLFTKLPQILGRARLASVEAAQLQTNLGEFFKYMQRQATDLFTQE 301          
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: A0A6A4QKN9_LUPAL (Putative chromatin remodeling & transcriptional activation CHROMO-DOMAIN family n=4 Tax=Lupinus TaxID=3869 RepID=A0A6A4QKN9_LUPAL)

HSP 1 Score: 184 bits (466), Expect = 1.250e-48
Identity = 118/298 (39.60%), Postives = 167/298 (56.04%), Query Frame = 3
Query:   93 SNKNKFKADDKVYAMDSGDLYEAKVIKFKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXXKARVDVKKDTED-------------DSGVTE--------VKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQQAARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYE 923
            SN   + + +KV A     +YEAKV K +    ++ YF+HY+GW+  WD+WV E  LM    E ++ QQ L DKK+ A+ N    +  Q              K  VD K D ED             D GV +        VK+ +P TLKKQLV DW  VTQ+ + LV LPR  T   ++ +Y+E K  + T   A    E + G+R YFD+ALP++LLY +ER QY  T+  + G SPS IYGAEHLLR+FV+LP+LLA   +    + ++Q++L DFL+F+QK+ + FF+  Y+
Sbjct:   23 SNSKLYSSGEKVLAYHGPRIYEAKVQKAEIRKNEWRYFVHYLGWSKNWDEWVGEDRLMKPTEENVKKQQAL-DKKQNAEKNVRTGRSSQPKA-----------KTSVDAKVDKEDIKNIVSKGKKRRHDLGVEKGSVTVEKLVKIQIPATLKKQLVDDWTFVTQQDK-LVTLPRSPTIDEILTKYLEYKTKKDTTV-ADSIGESLKGIRRYFDRALPMMLLYTKERKQYIETI--VDGVSPSTIYGAEHLLRLFVKLPELLAYMTIEEETLNRLQQILLDFLKFLQKSQSTFFLSTYD 304          
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: K7MM16_SOYBN (MRG domain-containing protein n=20 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=K7MM16_SOYBN)

HSP 1 Score: 183 bits (465), Expect = 1.770e-48
Identity = 113/289 (39.10%), Postives = 164/289 (56.75%), Query Frame = 3
Query:   93 SNKNKFKADDKVYAMDSGDLYEAKVIKFKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXXKARVDVKKD--------TEDDSGVTE--VKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRG--TPQQAARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYE 923
            SN   +   +KV A     +YEAKV K +    ++ YF+HY+GW+  WD+WV E  LM    E + ++QQ  DKK+    N    +  Q                + +V K          E  SG  E  VK+ +P TLKKQLV DW+ VTQ+ + LVKLPR  T   +M +Y+E K+ +    P       E++ G+R YFDKALP++LLY++ER QY+ ++  +   SPS IYGAEHLLR+FV+LP+LLA   +    + ++Q+ L DFL+F+QKN + FF+  Y+
Sbjct:   24 SNSGVYSEGEKVLAYHGPRIYEAKVQKTEIRKSEWKYFVHYLGWSKNWDEWVGEERLMKHTEENV-LKQQALDKKQNVDKNVKSGRSSQGKAKISTDAKMDKEDVKNNVSKGKKRKHDAGVEKGSGTVEKLVKIQIPATLKKQLVDDWDSVTQQDK-LVKLPRSPTVDEIMTKYLEYKSKKDGVAPDSIG---EILKGIRCYFDKALPMMLLYKKERKQYNDSI--VDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKLLDFLKFLQKNQSTFFLSAYD 305          
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: A0A1U8AX29_NELNU (protein MRG1 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AX29_NELNU)

HSP 1 Score: 183 bits (465), Expect = 1.870e-48
Identity = 114/290 (39.31%), Postives = 171/290 (58.97%), Query Frame = 3
Query:   87 ASSNKNKFKADDKVYAMDSGDLYEAKVIKFKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXXKARVDVK--KDTEDDSGVTE---------VKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQQAARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYE 923
            ++S+ + F   +KV A     +YEAKV+K +   +++ Y++HY+GW+  WD+WV    LM    E +  QQ L +K++ A  N    +  Q                R  V   K  + DSGV E         VKV +P TLKKQLV DWE VTQ  + LVKLPR  +  +++ +Y++ K+ +     A    E++ G+R YFDKALP++LLY++ER QY   V  +   SPS +YGAEHLLR+FV+LP+LLA +++    +T++Q+ L DFL+F+QKN +AFF+  Y+
Sbjct:   24 SASDSSLFSEGEKVLAYHGPRIYEAKVLKVELGKKEWKYYVHYLGWSKNWDEWVGVDRLMKFTEENVRKQQTL-EKRQGADKNPKSGRSTQIKPKNSTDAKVDKEDVRNHVSRGKKRKSDSGVEEKDTESVEKLVKVQIPSTLKKQLVDDWEFVTQLGK-LVKLPRSPSVDDILKKYLDYKSKKDG-MIAESIGEILKGLRCYFDKALPVLLLYKKERQQYHEAV--VDNTSPSTVYGAEHLLRLFVKLPELLAYASIEEETMTRLQQKLLDFLKFLQKNQSAFFLSTYD 308          
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: A0A1U8FZ70_CAPAN (protein MRG1 n=12 Tax=Solanaceae TaxID=4070 RepID=A0A1U8FZ70_CAPAN)

HSP 1 Score: 183 bits (464), Expect = 2.250e-48
Identity = 107/276 (38.77%), Postives = 160/276 (57.97%), Query Frame = 3
Query:  120 DKVYAMDSGDLYEAKVIKFKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXXKARVDVKKDTEDDSGVTE--------VKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQQAARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYE 923
            +KV A     +YEAKV K +    ++ YF+HY+GWN  WD+WV    LM    + +  QQ L  K+   K   + R + +              K+ V   K  + DSG  +        VK+ +P TLKKQLV DWE +TQ+  +LVKLPR  T  +++A+Y+E ++ +        A E+++G+R+YFDKALP+ILLY++ER QY   V      SPS +YGAEHL+R+FV+LP+LLA + +    + ++Q+   DFL+F+QKN   FF+  Y+
Sbjct:   31 EKVLAYHGPRIYEAKVQKAELRKNEWRYFVHYLGWNKNWDEWVGADRLMKHTEDNVLKQQALDKKQGMEKSTRSGRSQAKPKSSADVKLDKEETKSNVPKGKKRKADSGTEKGNVSAEKLVKIQIPSTLKKQLVDDWEFITQQ-NKLVKLPRSPTVDDILAKYLEYRSKKDGMMTDPVA-EILNGIRLYFDKALPVILLYKKERQQYHEAVSA--NVSPSSVYGAEHLMRLFVKLPELLAYAKIEEETLNRMQQKFLDFLKFLQKNQGTFFLSAYD 302          
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: K3W9B5_GLOUD (MRG domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9B5_GLOUD)

HSP 1 Score: 182 bits (463), Expect = 3.550e-48
Identity = 117/305 (38.36%), Postives = 161/305 (52.79%), Query Frame = 3
Query:  108 FKADDKVYAMDSGDLYEAKVIKFK-------------PSGEQFT-YFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLK-DKKKKAKVNAAKRKEDQXXXXXXXXXXXXXXKARVDVKKDTE-----DDSGVT-------EVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQQAARAQE------LMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYE 923
             K DD V A     +Y+AKV+K                 G   T Y++HY GW+ +WD+WV    ++   P    +Q+Q K D KKK K    K+K                 K + + + DTE     DD  +        ++ + MPF+LKKQLV DW H+TQEP RLV LPR+ T + ++  Y+E K ++      A  +E      +M+G++ YFD+AL  ILLYR ER QY    QK      SEIYGAEHL+R+FVRLP LL  + L P E+  +Q  L DFL+++QKN A +F  EYE
Sbjct:    3 IKVDDIVMAYHGVMIYDAKVLKIDHGSGVQDESSKGAAKGTTMTQYYVHYQGWHKKWDEWVAHDRVLEDTPANRALQKQAKEDAKKKPKSAVPKKKISTSGIDPSAAKKSPFKKLKRNTENDTEEMPSPDDESILSGGGNAKQISIQMPFSLKKQLVEDWRHITQEPYRLVSLPRKPTVSQIINNYLEFKKSKLKEGDEADEKEYKNLEGIMEGIQSYFDRALGSILLYRMERKQYHEIKQKNGDVPVSEIYGAEHLIRLFVRLPILLGGANLPPRELASIQSRLNDFLKYIQKNAATWFSPEYE 307          
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Match: A0A833UGK4_JUGRE (MRG domain-containing protein n=13 Tax=Fagales TaxID=3502 RepID=A0A833UGK4_JUGRE)

HSP 1 Score: 183 bits (465), Expect = 3.820e-48
Identity = 112/287 (39.02%), Postives = 167/287 (58.19%), Query Frame = 3
Query:   93 SNKNKFKADDKVYAMDSGDLYEAKVIKFKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVN--AAKRKEDQXXXXXXXXXXXXXXKARVDVKKDTEDDSGVTE--------VKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQQAARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYE 923
            SN + +   +KV A     +YEAKV K +   +++ YF+HY+GWN  WD+WV    LM    E + M+QQ  DKK+    N  + +  + +              K  V   K  + DSG  +        V++ +P TL+KQLV DWE VTQ+ + LVKLPR  T  +++ +Y+E ++ +          E++ G+R YFDKALP++LLY++ER QY   V  +   SPS IYGAEHLLR+FV+LP+LLA   +    +T++Q+ L DFL+F+QKNH+ FF+  Y+
Sbjct:   53 SNSSVYSEGEKVLAYHGPRIYEAKVQKAERRKKEWRYFVHYLGWNKNWDEWVGVDRLMKHTEENV-MKQQALDKKQGVDKNPKSGRSAQTKPKSSADAKLDKEDLKNNVSKGKKRKSDSGAEKDNVSLEKLVRIQIPSTLRKQLVDDWEFVTQQDK-LVKLPRSPTVDDILTKYLEYRSKKDG-MMTDSIGEILKGIRCYFDKALPVMLLYKKERKQYHEAV--VDNVSPSTIYGAEHLLRLFVKLPELLAYVNIEEETLTRLQQKLLDFLKFLQKNHSTFFLSAYD 334          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5X7_9PHAE2.040e-18396.66MRG domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CM09_9STRA1.530e-6948.18Putative chromatin binding protein n=1 Tax=Tribone... [more]
A0A4D9CY10_9STRA3.120e-5641.78MRG domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2RY99_9STRA6.500e-5341.73Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6A4QKN9_LUPAL1.250e-4839.60Putative chromatin remodeling & transcriptional ac... [more]
K7MM16_SOYBN1.770e-4839.10MRG domain-containing protein n=20 Tax=indigoferoi... [more]
A0A1U8AX29_NELNU1.870e-4839.31protein MRG1 n=1 Tax=Nelumbo nucifera TaxID=4432 R... [more]
A0A1U8FZ70_CAPAN2.250e-4838.77protein MRG1 n=12 Tax=Solanaceae TaxID=4070 RepID=... [more]
K3W9B5_GLOUD3.550e-4838.36MRG domain-containing protein n=1 Tax=Globisporang... [more]
A0A833UGK4_JUGRE3.820e-4839.02MRG domain-containing protein n=13 Tax=Fagales Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:486128..492106 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score548.9
Seed ortholog evalue1.5e-153
Seed eggNOG ortholog2880.D7FRM2
Model size2259
KEGG koko:K11339
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.histone H2A acetylation
EggNOG OGsKOG3001@1,KOG3001@2759
Ec32 ortholog descriptionMRG and Chromo domain protein
Ec32 orthologEc-12_002520.1
Cds size900
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.750.1prot_Ecto-sp6_S_contig100.750.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 486184..490803 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348726.0825288-UTR-Ecto-sp6_S_contig100:486127..4861831682348726.0825288-UTR-Ecto-sp6_S_contig100:486127..486183Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 486128..486183 +
1682348726.1611705-UTR-Ecto-sp6_S_contig100:490803..4921061682348726.1611705-UTR-Ecto-sp6_S_contig100:490803..492106Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 490804..492106 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348726.0949218-CDS-Ecto-sp6_S_contig100:486183..4862911682348726.0949218-CDS-Ecto-sp6_S_contig100:486183..486291Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 486184..486291 +
1682348726.1049876-CDS-Ecto-sp6_S_contig100:487787..4879521682348726.1049876-CDS-Ecto-sp6_S_contig100:487787..487952Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 487788..487952 +
1682348726.1151695-CDS-Ecto-sp6_S_contig100:488327..4884291682348726.1151695-CDS-Ecto-sp6_S_contig100:488327..488429Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 488328..488429 +
1682348726.12462-CDS-Ecto-sp6_S_contig100:489082..4893221682348726.12462-CDS-Ecto-sp6_S_contig100:489082..489322Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 489083..489322 +
1682348726.133849-CDS-Ecto-sp6_S_contig100:489843..4899641682348726.133849-CDS-Ecto-sp6_S_contig100:489843..489964Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 489844..489964 +
1682348726.1430976-CDS-Ecto-sp6_S_contig100:490282..4904251682348726.1430976-CDS-Ecto-sp6_S_contig100:490282..490425Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 490283..490425 +
1682348726.1519465-CDS-Ecto-sp6_S_contig100:490782..4908031682348726.1519465-CDS-Ecto-sp6_S_contig100:490782..490803Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 490783..490803 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.750.1

>prot_Ecto-sp6_S_contig100.750.1 ID=prot_Ecto-sp6_S_contig100.750.1|Name=mRNA_Ecto-sp6_S_contig100.750.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=300bp
MTKTAKDKKGASSNKNKFKADDKVYAMDSGDLYEAKVIKFKPSGEQFTYF
LHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKED
QKVKEQIKKEDQKIKKARVDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDW
EHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQQAARAQELMDGVR
IYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQ
LLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYEDEEPEEPQTA*
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mRNA from alignment at Ecto-sp6_S_contig100:486128..492106+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.750.1 ID=mRNA_Ecto-sp6_S_contig100.750.1|Name=mRNA_Ecto-sp6_S_contig100.750.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5979bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:486128..492106+ (Ectocarpus species6 EcLAC_371)
GGGTAGCAAGGCGGCTGAGCACAGAGAGAGAGCGCAGGAAACGCGGAGAA ATCACCATGACGAAAACCGCCAAAGACAAGAAAGGTGCCTCGTCCAACAA AAACAAATTCAAGGCAGATGACAAGGTCTATGCTATGGACAGCGGTGATC TGTACGAAGCCAAGGTCAGTTTCAAACTCACAATTTGAATTATAGCTTGG CGGTGGGTCGGGGGTGTAGTGGACTGAAAGGTTGGAGAGACCCGCACTCT GAAGATAGTTGCCGGCATGCGATCGAGCCGATGCCGGCTGTCACGTGATC GGTGTGATGGTTACTGAAAGAGAGAGCATCTTCCTCAGGTAGTTTCACGG GAAACTGTACTAGCTCTGCTGTCTGCATTCAGCAGTTTCACTTAATAATG TGGCCTCTGTTCCTGCCCTCCCTGTAGCGCGAGTAGATGGCGAACTATGC GTTTGGGAGATGTGGGAGTGGCGATGCGTTGTTGTTCTTTTGTCTTGGTG TTCTTTGTGTGTGTTATTTGCTACGCTTGTTTACAATTTTGCACAGGCTT GTTACAAGTGGTAAGCGTCGATAATAAGCGACGCGGCGCTGAATTTAATG CAAGTTGTCCGGACATGTGCAACACCCAGCTGTTACGTTCGTACGTTTTC GACGGGAATGCGGAGGACTTGTCGCGTGATTACTACATGCATACTATTTG GGTGGCAACGAAAGACACTGGACGAAAGGCCTAGCGCTGTGACGTACGTC CATTGATGGAGTATGGAACTCGTCTGCCAACATTGGCTCGTCGTCTATGG CGGCTTTGGTTTTAAAAAGCTCGTCTTCCAAATCAGAGGTCAGCGATAGA GGACCTTCGGATTCGATCGAGTTGTCCTCATCGCGGACGTTTTGGTCGCT CGGGGTCTTGGTGGTTCGTGTTCATGTTGTAGTCGGCACTGTGGTGCGAC AGTGTGGGGCCAGGTTTTGTGGTCAAATGGAACATTCAGAACCGTTCCGG TCTCCGCTCAATACATTCTAGTATCCGTACTGGTCCAACTGCTGGTGCGT CAAACAAATACGGAAAGGTGTAGATTGGCGCCCAGCATTGATGAGACGAA AACACCCCCAACGCACATGTGCTGTACGGATTAGGCAAGCGATGGCTCTT GGTGTCCGAACTCTTCCGCGGGTACATAGTATCTCCCTGTAGATGTCGGC CATTTTGTCGTTTCCGTTGTTTGGGTCTTGCCCAGTGAAGCAATTTGATT CAGATGTTCGCATGCACCAGCCGGGCGCACCAACGCAAACGGAATTTTTG TGCTTGGAGTTGCACTGCAGCTGCAGCCCGCCAGGCCTCTCGCAGACCGC GAGCAAGAGGCATAAAGGTTCCAAGCGCGTTGACGCCCGTGGTCCTGACT GCGCTCCCTCGGTGCTACGCAATGCTTGGGTGTTGCGCGGGAAGATCGTT GTCACCCGGGCGTTTCTCTCTCGGTTACTATTCGGCCTTTTTTATCGCCA TGCTGGCGTTCAGAAATAGTACCGAGGGGAACAATAATGTTGACGTCCAG AATAAACGGAACGAGGAACACACGCACACACCATCCGTTGCGCCAAATGA ACCCGCTCAGTGCAAGTAGACCTCGTTCCTCTCGTGTCATGCCCCTGTGT CCTTTGCCAGGTTATCAAGTTCAAGCCGTCCGGAGAGCAGTTCACGTACT TCTTGCACTACATGGGGTGGAACAGCCGATGGGACAAGTGGGTTGTCGAG TCGGACCTCATGGCGGCGGGGCCTGAGGCTTTGGAAATGCAGCAACAGCT CAAGGACAAGAAGAAGAAGGCGAAGGTCAGCCAGCTCTCCACGTGGTTGT TGCGATCAAGATCGGTTTCTACTACTGTTAAGGAGTAGTAGGACCTTGTG TTCGGGCTTGTGCTGTTGAACGCGACGTTATAAACCTTCCTTCATGAGCT GGGTCCGAGCTCGAACAGAAACTGTCATGAAGTTCCCAATTGAGCGGTTG GTCCGTCAGCGTGACAAACACCCGGTATCCGTGGAAATAATGAACTTCTG CCCCGGGAATGGCCTGGGCGAAGGGATTCGGTCGGTGTGACCTCGGCGGG TCATGACCGTTCACAATGTTTTTATCCCGCTGCTCCTCTTGTTGAAGCAA CGTGGCGTGTGATTTTTTTCCTTCCTCGTTCGGTCACCGCTGGGGTCCAG GTGAACGCGGCCAAGCGCAAGGAAGACCAGAAGGTCAAGGAGCAGATCAA GAAGGAAGACCAAAAGATCAAGAAGGCTCGCGTAGATGTCAAGAAGGATA CGGTGAGAGGGAGCTTACATTTAGGGATGATTTCCACGTTCGATCAAACG CTCGATCGAACGCCTTTTTTCAGTCAAGGATGCGGGCACACGTAGCGTTC CGGCTGAAAGCAAACATCAGCAAACGTGTGGAGGTTTAAGTATTTGCTGC ATAAGCGGGGCAACAAAATCAACAAACCTACGAATGCCGACTACCTGAAT CGTGGTCCTCGCCTTGACGCTACCTGACGATACCTCTGCGAAATGAACTC AATGCGCACTGCTCGTGTACCACAAAATTCGCTGCTCTCCTCCGGTGCTA CCAGATCCAGACAAAACGTACAGCAGTTGTTTAAGTATTTGCAGCTCTCC TCCGGTGCTACCAGATCCAGACAAAACGTACAGCAGTTGTTTAAGTATTT GCAGCTGTACAGACCTAGACAACAAGAATACTTATGGAGTAGAGGAGGAT ATTGGTTGCTAATGCTTTGCTAGCCGCTGCTGTTCTGCTGTGCAGTACTC CAGATGGCAGACGAACAAAGCCGGGTTGTTGAGGTCGTTGCGTGCGCTTT GTGAATCTTAAATCTTCACGGTCTCTGTAGTGGATCATACATGAGGATGA CGGCATATGTGTTCTCGACGACGAAACCTTGCTCTCCCCGCGGGGACGAC AACAGGAAGACGACAGCGGGGTGACAGAGGTTAAGGTGGCAATGCCCTTC ACGCTCAAGAAGCAGCTCGTCACCGACTGGGAGCACGTCACCCAGGAGCC GCGGCGTCTGGTCAAGCTGCCGCGCGAGCTGACCGCCGCAAACGTGATGG CGCAGTACATGGAGAGCAAAGCCAACCGAGGGACGCCGCAGCAGGCTGCT CGCGCCCAGGAGCTCATGGACGGCGTGCGGATCTACTTCGACAAGGTGAG GGCTAGGTCAGACCAGATCCGGTTCGGGTGAGGGGGGGATCAGATGGGGG TGTTTGTTGCGTGGAGCAGGTTGCCCGTGCGACAACGTGAAGCATCGCGT CTTGGCTGGTTGGCGTTTCGTGCTTGAGTTGCCGTCCGGAGGAGGCTTTT CGCTCCGGGACATGAAGCGCCGGCCAGCGCGACGACCACGCGGCATTATT TCTATTTCGTTTTGGTGCGGTGGCCATCTAGAAGTAGTTGAGGCCGGCGG ATGCTCTCCGGCGCTGTTCGCTTAAGCCACCGTCGGTGGTGCCGACGAGC GTGCCCGCCACGCATGAGGCATGTGCGTATGCACGGCCCATGTTTTTTCG ACCGTTTCCAAAATTTGTGCCACGTGTCGGTTTACGCTGTGGGAAGCGGA CACTGGGCGTTCTTCGAATGGCGCGGGTGGCTGTTTCTGTGCACACGCCA TAATTACCGTTCTGAAGCTTGCGGGTTCCCCAACGAACGTTTCCGTTGCC TTTTCGCTGGACGTAGGCCCTGCCTTTGATCTTGCTCTACCGGCAAGAGA GAACGCAGTACGACATCACGGTGCAGAAACTCCCCGGCAAGAGTCCGAGC GAGATTTACGGGGCAGAGCATCTCCTGAGAGTCTTTGGTGAGCCACCGCC CGTGCTCTCCATTGTGCAGCTCACGAGGCGTGTCGTATGCAACCTTCCAG GGCACGTTGCTCTGGCCCGTCGATTACTTCCGTGGTCGTGGTCGCCATGT CCATAGCGAGCGTGGATGCCGAAATATTTTCTCGTCGATTGTGCTTCCAG GGTTGAAAATTCCCGTGGCTTACACTCTGCGGCATTCCGGGGATGAGGTA CTGTTTTCTATTTCCAAACTCTCATACGCCCCTTGTTGTTTACGTGTGAT GGCGGCAACTTCGTCACCCCGGCCGCCCGCTGGCTACGACGCCACCGTGC TCCAGTGCGGTTGCCACAGCTGCTCGCACAGTCTGCTCTCACGCCGCCGG AGGTGACCCAGGTGCAGAAGTTGCTCGCGGACTTCCTTCGGTTCATGCAG AAGAACCACGCCGCCTTCTTCGTGCAGGAGTACGAGGACGAGGAACCGGT GGGTGTTGTTGAATTCTGCCGGATCCAAGCAGGAGTAGCAGCAGGGTTGG AAAAAGGGTGGATCGTTGGAGAGCTATGGTGCTAAGTTGTGTTTTCTGCA AGACGTAGCGCTTCGCTTCTCGAGTCGACTTCGGGTATAGCACAGGCAGG GTCGGCTTGTGCGCCTGGCTCTGTTGTGCCGGGTTAGCTCCTCCGGAAGA TTGGATTGCAAACTCCGCTGTTACCATGCCCTTGGCTGTCGCCTCTGGCG CAGCTTGCCCATAACAGAGGCTGCCAAACGATGTACACCCCAATAGTGCA ACATATTTTGCCTTGCCTCACATCCTCATTCCGCCCTGCTGCCCCGTGAC TCCAGGAAGAACCGCAAACCGCATAGCCACCACCGGTCCACGCGGCACTA CGCCCATCTTCACCCGCTAGTCGAGCTTGGCCGGACGAGGCTAGGTCGTG GAGCCCTCGCGCAGACCCGGCTCAAGCTTGACAGGATCGCCATTTCTCCA TAACAAGACCAACCCCTTGGTGGTGTATCGCGGGTTGACCAGTCTGCCGA GAGTGAAAGGTTGGGGGCTGGATTGCTCCTATGGTAAACGGGTTGCGATG CGTCCACAAGCGATTCGGTATTCTTCGTATATAGAGAAATTTTGGTGTGT TGGAGACTGAAAGTAGAGCGGGTGGTTCAATGTCTCTGGATTGTGCCGAC GGCAATGAGTTCTTCGGTTGAGGCAGTCACTGTGTTGTTTGACGCGCTTG CATCTTGTATGCGTGTCCGGATGCCGAGCGGCCGTCGTCGTTCGTGCAAT GATGGTCTGGCATTGGGTCCTGGGCACTACCTATTGAATTCGTATGAGAT TGCAAGTTCCGCAACCGGCCCCGAATATGTTTCTACTGTAATTTTTGTTT TGTCATCAAATAGTTTAGTTCGGTTAGTGTGCGAGTGGTTCGCACGGTGT CCTGAGTTAATGTTCGACTGGAGAGCTGTTTCCCGTGCATGGGGAAAGGG GGCGAAGTCACGTTTTCCGAGGGCTGCTGATTTCATTTTGGACTATCAGT ACGCTGACTTCTGCTGCGCCAGTGACCTCCGTGTCACAGCTGCATCTGGA TATCCATGTTAAAAAAATGTCGATTCTCTATGTGGTATGTCGTGAACGGG TTATCTTAGCCTGAGGTTCGAGGCCACCCGCCGCTTGTGCCCGAGGCCCG CTAGGCGGCAAAATCCGTCCAGGTGACGCTCGTTTGCTGTACGGAATGTC TTTCCAGAGGTGCGGAGTACAGAGATCAAACGGCAGCATTACGCCCTCAC GGCCTCGAACCGATCCTCGCGCAAAAAATTCTAGCGGTGCGTGCAAGTAT TGAGTGAAGGTTGCGCTGCCCAAGGGTAGAGAAGTTGAGTGTGTGTGGAT GGCTTAATTGTGAAAGCACAAAGAACCGCGTGGGAGTGGCCAGGTGGACG ACCACTGAGCAAAACATTGCTGAGACTAACTGCTGTAGCCTCGAATTTTT TCTAGAGGTACTTGCACTCAACCATGGGGCTTTGGGATTGATTAGAATCT GAAATTTGTGAGATCCTGGCGTCTCGCAGTATCCCGACGAGTCAGCACTC CTACAACAGAGGAACAACCAGGAGGAGTCGACATCACGCTCACGTCACCC GTGTGCCACAGGGGATAGCAGCATTCATT
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:486128..492106+

>mRNA_Ecto-sp6_S_contig100.750.1 ID=mRNA_Ecto-sp6_S_contig100.750.1|Name=mRNA_Ecto-sp6_S_contig100.750.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:486128..492106+ (Ectocarpus species6 EcLAC_371)
ATGACGAAAACCGCCAAAGACAAGAAAGGTGCCTCGTCCAACAAAAACAA
ATTCAAGGCAGATGACAAGGTCTATGCTATGGACAGCGGTGATCTGTACG
AAGCCAAGGTTATCAAGTTCAAGCCGTCCGGAGAGCAGTTCACGTACTTC
TTGCACTACATGGGGTGGAACAGCCGATGGGACAAGTGGGTTGTCGAGTC
GGACCTCATGGCGGCGGGGCCTGAGGCTTTGGAAATGCAGCAACAGCTCA
AGGACAAGAAGAAGAAGGCGAAGGTGAACGCGGCCAAGCGCAAGGAAGAC
CAGAAGGTCAAGGAGCAGATCAAGAAGGAAGACCAAAAGATCAAGAAGGC
TCGCGTAGATGTCAAGAAGGATACGGAAGACGACAGCGGGGTGACAGAGG
TTAAGGTGGCAATGCCCTTCACGCTCAAGAAGCAGCTCGTCACCGACTGG
GAGCACGTCACCCAGGAGCCGCGGCGTCTGGTCAAGCTGCCGCGCGAGCT
GACCGCCGCAAACGTGATGGCGCAGTACATGGAGAGCAAAGCCAACCGAG
GGACGCCGCAGCAGGCTGCTCGCGCCCAGGAGCTCATGGACGGCGTGCGG
ATCTACTTCGACAAGGCCCTGCCTTTGATCTTGCTCTACCGGCAAGAGAG
AACGCAGTACGACATCACGGTGCAGAAACTCCCCGGCAAGAGTCCGAGCG
AGATTTACGGGGCAGAGCATCTCCTGAGAGTCTTTGTGCGGTTGCCACAG
CTGCTCGCACAGTCTGCTCTCACGCCGCCGGAGGTGACCCAGGTGCAGAA
GTTGCTCGCGGACTTCCTTCGGTTCATGCAGAAGAACCACGCCGCCTTCT
TCGTGCAGGAGTACGAGGACGAGGAACCGGAAGAACCGCAAACCGCATAG
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