mRNA_Ecto-sp6_S_contig10.600.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: D7FVK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK4_ECTSI) HSP 1 Score: 969 bits (2505), Expect = 0.000e+0 Identity = 513/517 (99.23%), Postives = 513/517 (99.23%), Query Frame = 1
Query: 1 MTPTLLRGLCAHGTKTSVEAARAWRREARVVASVTAKRRSAAVVPAARALCSAAPVAVGEEDTKVAFVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
MTPTLLRGLCAHGTKTSVEAARAWRREARV ASVTAKRRSAAVVPAARALCSA PVAVGEEDTKVAFVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTD AIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVK RVSDMLEGSDLSKFII
Sbjct: 1 MTPTLLRGLCAHGTKTSVEAARAWRREARVFASVTAKRRSAAVVPAARALCSATPVAVGEEDTKVAFVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 517
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: A0A7S3HU59_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HU59_9STRA) HSP 1 Score: 503 bits (1294), Expect = 5.220e-168 Identity = 271/455 (59.56%), Postives = 343/455 (75.38%), Query Frame = 1
Query: 214 LPPQDIG--TAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPL------NRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQE-QEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
+PP G +KP+++V+QL ++IVGQ DAKRAVAIALRNRWRR +L +DLR +VIPKNILMIGPTGCGKTEIARR+AK+SQAPFIKVEATKFTEVGFHG+DVD+II+DLVEV ITMTKKK + ++A + I+ CLVG + AS+ SF + LK G E+ I + L N N G+ F NS P D+ LK G +K++ + MK+ DARPL E+ E E+ L+ VT++A+ AVEE+GIVFIDEIDKI ++G+ R ADAS+EGVQRDLLP+IEGSS+ST+HGN++T FILFIASGAFHS KPSD+LAELQGRLPIRV L+GL+EDD+++ILTEP NLIRQQ+ ++K+E V L FT+ AIREIARV N+TVENIGARRLHTV+ER++E ISFDA+E + VV D + VK RVSD+L +D+ K+I+
Sbjct: 47 VPPLTSGLQNVLKPKEVVEQLNKYIVGQPDAKRAVAIALRNRWRRQQLSDDLRNEVIPKNILMIGPTGCGKTEIARRIAKLSQAPFIKVEATKFTEVGFHGKDVDQIIRDLVEVSITMTKKKLKEQVKDAAAAAAEEKILTCLVGVNADASTMNSFREQLKAGLCEDIMIDIDLPPKPEKNDNKAGGPIGIAFDTNSGTFAPN--DLFGKLKVGFNGAGKKRDIKRMKVSDARPLAEEAEAERLLEDFDVTKEAITAVEESGIVFIDEIDKIVSSGDYRGADASSEGVQRDLLPLIEGSSISTKHGNVNTDFILFIASGAFHSAKPSDLLAELQGRLPIRVNLQGLTEDDMFRILTEPVTNLIRQQIALIKSEDVTLTFTEPAIREIARVAFLTNRTVENIGARRLHTVIERVMEEISFDAAEKQGENVVVTD-EYVKTRVSDLLLSTDMRKYIL 498
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: W7TQM4_9STRA (Atp-dependent hsl protease atp-binding subunit hslu n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQM4_9STRA) HSP 1 Score: 505 bits (1301), Expect = 9.780e-168 Identity = 261/456 (57.24%), Postives = 353/456 (77.41%), Query Frame = 1
Query: 223 QDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEE--YNIKVPLNRNNTPDMPGVIFSD-----------NSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
+ + A++P+++V+ L+++IVGQ+DAKRAVAIALRNRWRR KL +DLR ++IPKNILMIGPTGCGKTEIARR+AK+S APFIKVEATKFTEVGFHG+DVD+II+DLVE+ + MTKK++ + + + ++ L G + ++E+F DLL+KG+L + +++VP +R PG +F S N+ + I + +A K +++++ +K+A PL+ ++E+EK +DM+ VTR+A+++VEE+GIVFIDEIDKICN + R ADASAEGVQRDLLP+IEG ++ST+HGNI+T +ILFI+SGAFH CKP+D+LAELQGRLPIRV+LKGL+E+D+Y+ILTEP NLI QQV ++ TE + L+FTD A+REIARV A VNKTVENIGARRLHTVLERIVE ISFDA++ EGTV++VD LV GRV+D+L SD+SK+I+
Sbjct: 140 EPVAAALRPRELVEYLDKYIVGQADAKRAVAIALRNRWRRHKLPDDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKSEAQKAVEEKVLQILTGPYAREDAKETFRDLLRKGSLNDRLIDVEVPADRG-----PGGLFDKAGAGPGGGAFAESNPNVSMADFIGKFSRAIMP-KRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDYRGADASAEGVQRDLLPLIEGCTISTKHGNINTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEEDMYRILTEPVTNLIAQQVALLSTENIALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEQISFDAADKPEGTVITVDKGLVHGRVNDLLVESDVSKYIL 589
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: A0A836CKY0_9STRA (ATP-dependent hsl protease ATP-binding subunit hslU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY0_9STRA) HSP 1 Score: 501 bits (1291), Expect = 3.110e-167 Identity = 268/450 (59.56%), Postives = 342/450 (76.00%), Query Frame = 1
Query: 229 IGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVG---EKSGASSRESFEDLLKKGALEEY--NIKVPLNRNNTPDMPGVIFSDNSRA----NMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
+G A++P+++V+QL+++IVGQ +AKRAVAIALRNRWRR +L E +R +VIPKNILMIGPTGCGKTEIARR+AK+SQAPFIKVEATKFTEVGFHG DVD+IIKDLVE+ ITM KK +M HR A + + ++D L+ + G SRESF LL++G LE+ ++ VP +R P + N+ + P+ S GGK R +++ M I A PL+ ++ +E+ +DM VT++A+ AVE+ GIVFIDEIDKICNA + R ADASAEGVQRDLLP+IEGS+++T+HGN++T FILFIASGAF CKPSD+LAELQGRLPIRV+LKGL+E+D+Y+ILTEP NLIRQQ ++ EGVDL F DAAIRE+ARV A VN+TVENIGARRLHTVLER+VE ISFDA++ ++V +LV RVSDML SDLSK+I+
Sbjct: 83 LGVALRPREVVEQLDKYIVGQPEAKRAVAIALRNRWRRHRLREAMRNEVIPKNILMIGPTGCGKTEIARRIAKLSQAPFIKVEATKFTEVGFHGGDVDQIIKDLVEISITMVKKARMENHRAAARLKAEDTVLDLLLKAPIDLEGNRSRESFRKLLRQGLLEDIAVDVDVPADRG----APSLQLDQNTMTFTVVSGPRAHP-------SAGGK-RTEQKSMPISKALPLLTELSLEEMVDMGDVTKEAITAVEQDGIVFIDEIDKICNASDYRGADASAEGVQRDLLPLIEGSAITTKHGNVNTDFILFIASGAFSQCKPSDLLAELQGRLPIRVELKGLTEEDMYRILTEPVTNLIRQQKALLAAEGVDLVFEDAAIREVARVAAKVNRTVENIGARRLHTVLERVVEEISFDAADTAPSATITVTAELVARRVSDMLIESDLSKYIL 520
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: A0A024T9I4_9STRA (ATP-dependent protease HslVU, ATPase subunit n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024T9I4_9STRA) HSP 1 Score: 497 bits (1279), Expect = 6.920e-166 Identity = 266/466 (57.08%), Postives = 351/466 (75.32%), Query Frame = 1
Query: 178 EEDTKVAFVNL---ELPPQD--IGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNS---RANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
E +T + VNL E P D +G +KP+++VDQL+++IVGQ DAK+AVA+ALRNRWRR +L +DLR +V PKNILMIGPTGCGKTEIARR+AK++QAPF+KVEATKFTEVGFHG+DVD+IIKDL+E I + KK +M R+ + + IID L G+ +GA SR++F LL+ G L+E I V + +N P+ G I D S +N V D+M+V+ +GGK +++Q M + DARP++E+ME+E +DM V ++A+ EE GIVFIDEIDKIC++G R ADAS EGVQRDLLP+IEGS++ST+HGN++T ILFI SGAFHS KPS++LAELQGRLPIRV+LK L+E DL++ILTEP NLI QQ ++ TE V+L F + AI+E+ARV +N TVENIGARRLHTVLE++VE ISF+AS+ EG V+++ ++V RV ML+ SDLSKFI+
Sbjct: 28 EVETPLPVVNLVVEETPMDDDELGRKLKPKEVVDQLDKYIVGQKDAKKAVAVALRNRWRRQQLPDDLRPEVSPKNILMIGPTGCGKTEIARRLAKLAQAPFVKVEATKFTEVGFHGRDVDQIIKDLLENSIQLVKKHRMERVRKDIAGVVEQRIIDALAGQHTGAQSRQTFLKLLRDGELDERMITVDVRSSNNPNSIGAISIDPSGKVNSNNSTVNDLMKVI---SGGKKMEKKQ-MTVADARPILEEMELENAIDMGDVVKEAISEAEENGIVFIDEIDKICSSGAYRGADASDEGVQRDLLPLIEGSTISTKHGNVNTDHILFIGSGAFHSVKPSNLLAELQGRLPIRVELKALTEQDLWRILTEPVANLIVQQKALLATENVNLNFEEDAIKEVARVAYEINHTVENIGARRLHTVLEKVVEDISFEASDYPEGHVLTITKEIVHDRVGAMLKKSDLSKFIL 489
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: A0A8K1C4S1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4S1_PYTOL) HSP 1 Score: 496 bits (1278), Expect = 3.100e-165 Identity = 265/465 (56.99%), Postives = 350/465 (75.27%), Query Frame = 1
Query: 178 EEDTKVA----FVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKV--PLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
EED VA ++E DIG +KP+++V+QL ++IVGQ DAKRAVAIALRNRWRR K+ EDLRG+V PKNILMIGPTGCGKTEIARR+AK+S+APF+KVEATKFTEVGFHG+DVD+II+DLVE I M KK++ R+ V+ ++ I+D L G SR SF+ LL+ G +E+ I V P+NRN + + + + + MP I ++ + G K + + + M + ++R + E+ME+EK +DM+ V R+A+ EE GIVFIDEIDKIC+ G+ RR AD S+EGVQRDLLP+IEG +ST+HGN++T ILF+ SGAFHS KPSD+LAELQGRLPIRV+LKGL+E DLY+ILTEP NL++QQVE++KTE V L+FTD AIREIARV A +N+T+ENIGARRLHTV+E++VE ISFD+SEME G+ V++ + V RV +++ +DLSKFI+
Sbjct: 67 EEDVPVASEEEVAHVEAEEDDIGRKLKPREVVEQLNKYIVGQPDAKRAVAIALRNRWRRLKISEDLRGEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKQRKERVRKEVQHLVENRILDALTGANVTERSRASFQRLLQLGEMEDRTISVDVPVNRNMSGNPISFVTGEKA---MP----IGEIFNKAYGEK-KTERKVMTVAESRAVFEEMEMEKAIDMSDVVREAISETEENGIVFIDEIDKICSNGDFRRQADPSSEGVQRDLLPLIEGCVISTKHGNVNTDHILFVGSGAFHSAKPSDLLAELQGRLPIRVELKGLTEQDLYRILTEPVTNLVKQQVELIKTEDVHLEFTDEAIREIARVAAEINQTIENIGARRLHTVMEKVVEEISFDSSEMEAGSTVTITKEFVAERVGKLMKKTDLSKFIL 523
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: A0A2D4BX63_PYTIN (ATP-dependent protease HslVU, ATPase subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX63_PYTIN) HSP 1 Score: 492 bits (1266), Expect = 2.310e-164 Identity = 262/445 (58.88%), Postives = 336/445 (75.51%), Query Frame = 1
Query: 226 DIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKV--PLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
D+G +KP+++VDQL ++IVGQ DAK+AVAIALRNRWRR K+ EDLR +V PKNILMIGPTGCGKTEIARR+AK+S+APF+KVEATKFTEVGFHG+DVD+II+DLVE I M KK++ R+ V+ +S I+D L G SR SF+ LL+ G +E+ I V P+ RNN + + D +P I ++ + G K + + + M + ++R + E+ME+EK +DM V R+A+ EE GIVFIDEIDKIC+ G+ RR AD S+EGVQRDLLP+IEG +ST+HGN++T ILFI SGAFHS KPSD+LAELQGRLPIRV+LKGL+E DLY+ILTEP NLI+QQ+E++KTE V L+FTD AIREIARV A +NKTVENIGARRLHTVLE++VE ISFD+ EM G V+V + V RV ++L+ +DLSKFI+
Sbjct: 24 DMGRKLKPREVVDQLNKYIVGQPDAKKAVAIALRNRWRRLKIPEDLRAEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKQRKERVRKEVQHLVESRILDALTGANGTERSRASFQRLLRLGEMEDRTITVDVPVARNNASNPISFVAGDKG---LP----IGEIFSKAYGEK-KTERKAMTVAESRAVFEEMEMEKAIDMTDVVREAISETEENGIVFIDEIDKICSNGDFRRQADPSSEGVQRDLLPLIEGCVISTKHGNVNTDHILFIGSGAFHSAKPSDLLAELQGRLPIRVELKGLTEQDLYRILTEPVTNLIKQQIELIKTEDVHLEFTDEAIREIARVAAEINKTVENIGARRLHTVLEKVVEDISFDSCEMAPGATVTVTKEFVTERVGNLLKKTDLSKFIL 460
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: A0A5D6XXH3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH3_9STRA) HSP 1 Score: 493 bits (1270), Expect = 2.690e-164 Identity = 263/446 (58.97%), Postives = 340/446 (76.23%), Query Frame = 1
Query: 226 DIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKV--PLNRN-NTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
++G +KP+++V+QL ++IVGQ+DAKRAVAIALRNRWRR K+ +DLR +V PKNILMIGPTGCGKTEIARR+AK+S+APF+KVEATKFTEVGFHG+DVD+II+DLVE ITM KK++ R+ V+ +S I+D L G SR SFE LL+ G +E+ I V P+ RN N +M G I S +P E + G+ + + + + + ++R + E++E+EK +DM V R+A+ EE GIVFIDEIDKIC+ G+ RR AD S+EGVQRDLLP+IEGS +ST+HGN+ T ILF+ASGAFHS KPSD+LAELQGRLPIRV+LKGL+E DLY+ILTEP NLI+QQVE++KTE V L+FTD AIREIARV A +N+TVENIGARRLHTVLE++VE ISFD+S+M G V++ D+V RV +L+ +DLSKFI+
Sbjct: 65 EMGRKLKPKEVVEQLNKYIVGQADAKRAVAIALRNRWRRQKISDDLRAEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGKDVDQIIRDLVENAITMVKKQRKERVRKEVQHLVESRILDALTGANVTERSRASFERLLRLGEMEDRTITVDVPVARNHNANNMNGPISFVTSEKALPIGEIFTKAY-----GEKKTERKVLTVAESRAVFEELEMEKAIDMTDVVREAITETEENGIVFIDEIDKICSNGDYRRQADPSSEGVQRDLLPLIEGSVISTKHGNVSTDHILFVASGAFHSAKPSDLLAELQGRLPIRVELKGLTEADLYRILTEPVTNLIKQQVELIKTEDVHLEFTDEAIREIARVSAEINQTVENIGARRLHTVLEKVVEDISFDSSDMAPGATVTITKDVVADRVGKLLKKTDLSKFIL 505
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: A0A8J2WET5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WET5_9STRA) HSP 1 Score: 488 bits (1256), Expect = 1.320e-162 Identity = 247/438 (56.39%), Postives = 331/438 (75.57%), Query Frame = 1
Query: 238 AMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
A+ P+++ D+L+ HIVGQ AKRAVAIALRNRWRR L E+LR +V+PKNILMIGPTGCGKTEIARR++K++ APF+KVEATKFTEVGFHG+DVD+II+DLVE I +T+K++ R ++ I+D L G + +++ SF ++L+KG L++ I V + + P GVI D S N + D + K R + + + I+DARP+IE+ E+EK L+ V R+AV+AVEE+GIVFIDEIDKI NA + R ADASAEGVQRDLLP+IEGS+++T++GN++T ++LFIASGAFH KPSD+LAELQGRLPIRV+L+ L+E+ LYKILTEPK+NLI QQ ++ TE V L+FT+ AIREIARV A N+T+ENIGARRLHT +ERI++ ISFDA + G +V++D + V+ +V DML SD+SK+I+
Sbjct: 42 ALTPRKICDELDTHIVGQDAAKRAVAIALRNRWRRQLLGEELRAEVVPKNILMIGPTGCGKTEIARRLSKLANAPFVKVEATKFTEVGFHGRDVDQIIRDLVEASIALTRKRKAEAFRAEAARAAETRILDTLTGLNAAQATQSSFREMLRKGVLDDRQIDVDVPHSQPPQQSGVIQLDQS--NPVSINDFLGRFSQMASSKGRSERKRLAIRDARPIIEEQELEKLLENIDVNREAVQAVEESGIVFIDEIDKIVNASDYRGADASAEGVQRDLLPLIEGSTIATKYGNVNTDYVLFIASGAFHQAKPSDLLAELQGRLPIRVELEALTEEQLYKILTEPKHNLIAQQRALLATENVMLEFTEEAIREIARVAALANRTIENIGARRLHTCIERIIDEISFDACDYPPGDLVTIDEEYVRSKVDDMLVASDVSKYIL 477
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Match: A0A024GVM8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GVM8_9STRA) HSP 1 Score: 489 bits (1258), Expect = 8.830e-162 Identity = 259/459 (56.43%), Postives = 342/459 (74.51%), Query Frame = 1
Query: 181 EDTKVAFVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEE--YNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDAAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKGRVSDMLEGSDLSKFII 1551
ED + L ++G +KP+++V L I+GQ AKRAVAIALRNRWRR K+ DLR ++ PKNILMIGPTGCGKTEIARR+AK+++APFIKVEATKFTEVGFHG+DVD+II+DLVE I + KK++ R+ V+ + I+D L+G S A+SR +FE+LLK G +EE I VP++R N M G S + V +I + KA T + + + + M + ++R + E+ME+E +DM V R+A+ EE GIVFIDEIDKIC+ G+ RSADAS+EGVQRDLLP++EGS +ST+HGN++T ILFI SGAFHS KPSD+LAELQGRLPIRV+LKGL+E DLY+ILTEP ++L+RQQ+E++KTE +DL FT+ AIREIARV +N T+ENIGARRLHT++E++VE ISFDAS++ G+ V+V DLV+ RV ML+ +DLSKFI+
Sbjct: 100 EDPSNEEMKLNALDNEVGRKLKPREVVSILNTCIIGQESAKRAVAIALRNRWRRMKVTPDLRPEISPKNILMIGPTGCGKTEIARRLAKLAEAPFIKVEATKFTEVGFHGRDVDQIIRDLVENAINLVKKQKQERVRQQVQQLVERRILDALIGPNSTANSRAAFENLLKTGEMEERMITIDVPVSRGN--GMGGTPISFMASQGPLPVGEI--IGKAYTTMEKKSETRNMTVAESRSVFEEMEMENAIDMTDVVREAIHETEENGIVFIDEIDKICSTGDFRSADASSEGVQRDLLPLLEGSVISTKHGNVNTDHILFIGSGAFHSSKPSDLLAELQGRLPIRVELKGLTESDLYRILTEPVSSLVRQQIELLKTEKIDLDFTEDAIREIARVATDINNTIENIGARRLHTIMEKVVEDISFDASDLSPGSKVTVTKDLVRERVGPMLKKADLSKFIL 554 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.600.1 >prot_Ecto-sp6_S_contig10.600.1 ID=prot_Ecto-sp6_S_contig10.600.1|Name=mRNA_Ecto-sp6_S_contig10.600.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=518bp MTPTLLRGLCAHGTKTSVEAARAWRREARVVASVTAKRRSAAVVPAARALback to top mRNA from alignment at Ecto-sp6_S_contig10:1893313..1904433- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.600.1 ID=mRNA_Ecto-sp6_S_contig10.600.1|Name=mRNA_Ecto-sp6_S_contig10.600.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=11121bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1893313..1904433- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1893313..1904433- >mRNA_Ecto-sp6_S_contig10.600.1 ID=mRNA_Ecto-sp6_S_contig10.600.1|Name=mRNA_Ecto-sp6_S_contig10.600.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1554bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1893313..1904433- (Ectocarpus species6 EcLAC_371)back to top |