prot_Ecto-sp6_S_contig99.18826.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig99.18826.1
Unique Nameprot_Ecto-sp6_S_contig99.18826.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length208
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: D7FUM9_ECTSI (Ribosomal protein S23, component of cytosolic 80S ribosome and 40S small subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM9_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 1.120e-135
Identity = 204/207 (98.55%), Postives = 205/207 (99.03%), Query Frame = 0
Query:    1 MGVQQNKAPPNGSACFRTVRSVVGARALQWKGAAVSSSSGTNISEASNLQTFATGQQGLSSSMGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            MGVQQNKAPPNGSACFRTVRSVVGARALQW+GAAVSSS GTNISEASNLQTFATGQ GLSSSMGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS
Sbjct:    1 MGVQQNKAPPNGSACFRTVRSVVGARALQWRGAAVSSS-GTNISEASNLQTFATGQLGLSSSMGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 206          
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: A0A835Z8V8_9STRA (Putative ribosomal protein S23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V8_9STRA)

HSP 1 Score: 273 bits (697), Expect = 2.420e-91
Identity = 136/145 (93.79%), Postives = 144/145 (99.31%), Query Frame = 0
Query:   63 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            MGKGKP+GIRAGRKLRIHRRN+RWASKDYNK+HSVTAMKANPLGG+SMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+TDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGV++LALYK KKEKPRS
Sbjct:    1 MGKGKPSGIRAGRKLRIHRRNQRWASKDYNKAHSVTAMKANPLGGASMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSILALYKGKKEKPRS 145          
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: W7TKK2_9STRA (40s ribosomal protein s23 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKK2_9STRA)

HSP 1 Score: 256 bits (655), Expect = 6.030e-85
Identity = 127/145 (87.59%), Postives = 138/145 (95.17%), Query Frame = 0
Query:   63 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            MGKGKPAG  AGRKLR+HRRNE+WASK +NK+HSVT MKANPLGG++MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLNF DENDEVLI+GFGR GHAVGDIPGVRFKV+KV+GV LLAL+KDKKEKPRS
Sbjct:    1 MGKGKPAGSNAGRKLRVHRRNEKWASKRWNKAHSVTHMKANPLGGAAMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFVDENDEVLIAGFGRSGHAVGDIPGVRFKVIKVSGVGLLALFKDKKEKPRS 145          
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: M4BPE8_HYAAE (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BPE8_HYAAE)

HSP 1 Score: 253 bits (647), Expect = 9.950e-84
Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0
Query:   63 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            MGK KP+GIR  RKLR+HRR +RWA K YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRK  RVQLIKN KK+AAFVPRDGCLNF DENDEVLISGFGRRGHAVGDIPGVRFKVVKV+GV+LLALYK+KKEKPRS
Sbjct:    1 MGKHKPSGIRCARKLRVHRRTQRWAQKSYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKSCRVQLIKNSKKIAAFVPRDGCLNFVDENDEVLISGFGRRGHAVGDIPGVRFKVVKVSGVSLLALYKEKKEKPRS 145          
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: A0A4W5LQ08_9TELE (40S ribosomal protein S23 n=31 Tax=Eukaryota TaxID=2759 RepID=A0A4W5LQ08_9TELE)

HSP 1 Score: 253 bits (645), Expect = 4.360e-83
Identity = 125/140 (89.29%), Postives = 132/140 (94.29%), Query Frame = 0
Query:   68 PAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            PAGIR  RKLR+HRR +RW  K YNKSHS+TAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKC RVQLIKNGKK+AAFVPRDGCLN+ DENDEVLI+GFGRRGHAVGDIPGVRFKVVKVAGV+LLALYKDKKEKPRS
Sbjct:   29 PAGIRCARKLRVHRRTQRWNQKSYNKSHSITAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGCLNYVDENDEVLIAGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKDKKEKPRS 168          
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: B8C1Z7_THAPS (RS23, ribosomal protein 23 40S small ribosomal subunit n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8C1Z7_THAPS)

HSP 1 Score: 249 bits (635), Expect = 6.240e-82
Identity = 123/142 (86.62%), Postives = 133/142 (93.66%), Query Frame = 0
Query:   66 GKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            GKPAGIR GRKLRIHRRN+RW    Y K+HSVTAMKANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+ DENDEVL++GFGR GHAVGDIPGVRFK VKVAGV+LLALYK+KKEKPRS
Sbjct:    2 GKPAGIRTGRKLRIHRRNQRWHDLKYTKAHSVTAMKANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLVAGFGRSGHAVGDIPGVRFKCVKVAGVSLLALYKEKKEKPRS 143          
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: A0A7S2WV04_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV04_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.420e-81
Identity = 125/146 (85.62%), Postives = 138/146 (94.52%), Query Frame = 0
Query:   62 SMGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            +MGK KP+GIRAGRKLR+HRR +RWA+  Y KS+SVTA+KANP GG+ MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLNFTDENDEVLI+GFGRRGHAVGDIPGVRFKVVKVAGV+LLAL+K KKEKPR+
Sbjct:   12 TMGKHKPSGIRAGRKLRVHRRAQRWANLKYVKSNSVTALKANPFGGACMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLIAGFGRRGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRT 157          
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: A0A5A8EIQ0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EIQ0_CAFRO)

HSP 1 Score: 245 bits (625), Expect = 2.220e-80
Identity = 123/145 (84.83%), Postives = 133/145 (91.72%), Query Frame = 0
Query:   63 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            M +GKPAGI+A RKLR HRR +RWA K YNKSHS+TAMKANP GG+SMAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKK+AAFVPRDG LNF DENDEVLISGFGR GHAVGDIPGVRFKVVKVAGV+LLAL+K KKEKPRS
Sbjct:    1 MTRGKPAGIQAARKLRNHRREQRWAQKTYNKSHSITAMKANPFGGASMAKGIVLEKMGVEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGSLNFVDENDEVLISGFGRAGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRS 145          
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: A0A8E8U732_9STRA (40S ribosomal protein S23 n=3 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8U732_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.220e-80
Identity = 119/145 (82.07%), Postives = 135/145 (93.10%), Query Frame = 0
Query:   63 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            MGKG PAGIRA RKLR HRR++RWA KDY KSHS++ +KANP  G++MAKGIV+EK+GIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+ DENDEVL++GFGRRGHAVGDIPGVRFKVVKVAG +LLALYK+KKEKPR+
Sbjct:    1 MGKGLPAGIRAARKLRDHRRSQRWADKDYRKSHSLSTLKANPFAGATMAKGIVVEKLGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLVAGFGRRGHAVGDIPGVRFKVVKVAGASLLALYKEKKEKPRA 145          
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Match: A0A8E8PJI4_9STRA (40S ribosomal protein S23 n=2 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8PJI4_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.220e-80
Identity = 123/145 (84.83%), Postives = 131/145 (90.34%), Query Frame = 0
Query:   63 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 207
            M KG PAG+RA RKLR HRR +RWA K YNKSHSV AMKANPLGGSSMAKGIV+EKIGIEAKQPNSAIRKCVRVQLIKN KK+ AFVP DGCLNF DENDEVL+SGFGR GHAVGDIPGVRFKVVKVAGV+LLAL+K KKEKPR+
Sbjct:    1 MSKGLPAGMRAARKLRTHRRKQRWAQKHYNKSHSVAAMKANPLGGSSMAKGIVVEKIGIEAKQPNSAIRKCVRVQLIKNSKKITAFVPNDGCLNFVDENDEVLVSGFGRSGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRA 145          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUM9_ECTSI1.120e-13598.55Ribosomal protein S23, component of cytosolic 80S ... [more]
A0A835Z8V8_9STRA2.420e-9193.79Putative ribosomal protein S23 n=1 Tax=Tribonema m... [more]
W7TKK2_9STRA6.030e-8587.5940s ribosomal protein s23 n=2 Tax=Monodopsidaceae ... [more]
M4BPE8_HYAAE9.950e-8488.28Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
A0A4W5LQ08_9TELE4.360e-8389.2940S ribosomal protein S23 n=31 Tax=Eukaryota TaxID... [more]
B8C1Z7_THAPS6.240e-8286.62RS23, ribosomal protein 23 40S small ribosomal sub... [more]
A0A7S2WV04_9STRA1.420e-8185.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5A8EIQ0_CAFRO2.220e-8084.83Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A8E8U732_9STRA2.220e-8082.0740S ribosomal protein S23 n=3 Tax=Placidida sp. Ta... [more]
A0A8E8PJI4_9STRA2.220e-8084.8340S ribosomal protein S23 n=2 Tax=Placidida sp. Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 94..206
e-value: 1.0E-48
score: 163.7
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 66..207
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 124..131
NoneNo IPR availableGENE3D2.40.50.140coord: 89..207
e-value: 2.7E-62
score: 209.5
NoneNo IPR availablePANTHERPTHR11652:SF1440S RIBOSOMAL PROTEIN S23coord: 66..207
IPR005680Ribosomal protein S23, eukaryotic/archaealTIGRFAMTIGR00982TIGR00982coord: 70..206
e-value: 5.5E-53
score: 176.4
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 85..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:184260..191922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18826.1mRNA_Ecto-sp6_S_contig99.18826.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig99 184260..192625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18826.1 ID=prot_Ecto-sp6_S_contig99.18826.1|Name=mRNA_Ecto-sp6_S_contig99.18826.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=208bp
MGVQQNKAPPNGSACFRTVRSVVGARALQWKGAAVSSSSGTNISEASNLQ
TFATGQQGLSSSMGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAM
KANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVP
RDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKD
KKEKPRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006032Ribosomal_S12/S23
IPR005680Ribosomal_S23_euk/arc
IPR012340NA-bd_OB-fold