prot_Ecto-sp6_S_contig98.18783.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig98.18783.1
Unique Nameprot_Ecto-sp6_S_contig98.18783.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length123
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 4.410e-46
Identity = 91/115 (79.13%), Postives = 98/115 (85.22%), Query Frame = 0
Query:    1 MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFGFFHGVVFIPVMLSILPDRLVSNFAQ-KSIATVARRDST 114
            MAVGLVVDY+VHIVHYFLHQ+P I KD RIA ALGEIGPSV+VGA TTFLGIMPLAFAN   FRVFFKMF VIISFGFFHGVVFIPVMLSILPDRLVSN A  +  A++ R D +
Sbjct:  805 MAVGLVVDYMVHIVHYFLHQDPRIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGFFHGVVFIPVMLSILPDRLVSNSAHGEGTASITRHDGS 919          
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: A0A6H5JGQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ4_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.940e-44
Identity = 87/116 (75.00%), Postives = 95/116 (81.90%), Query Frame = 0
Query:    1 MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFGFFHGVVFIPVMLSILPDRLVSNFAQKSIAT-VARRDSTN 115
            MAVGLVVDY+VHIVHYFLHQ+P+I KD RIA ALGEIGPSV+ GA TTFLGIMPLAFAN   FRVFF MF VIISFGFFHGVVFIPV+LSILPDRLVSN   +   T + R   +N
Sbjct:  427 MAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMAGAATTFLGIMPLAFANNVIFRVFFNMFLVIISFGFFHGVVFIPVVLSILPDRLVSNSGHEEDTTSITRHTESN 542          
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.120e-44
Identity = 89/121 (73.55%), Postives = 101/121 (83.47%), Query Frame = 0
Query:    1 MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFGFFHGVVFIPVMLSILPDRLVSNFA-QKSIATVARRDSTNMVRML 120
            MAVGLVVDY+VHIVHYFLHQ+P+I KD RIA ALGEIGPSV+VGA TTFLGIMPLAFAN   FRVFFKMF VIISFGFFHGVVFIPV+LS+LPDRLVS  A ++  A+V R   +  + +L
Sbjct:  735 MAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGFFHGVVFIPVLLSMLPDRLVSQSAPEEDAASVERHTGSKKLVVL 855          
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.250e-43
Identity = 87/121 (71.90%), Postives = 101/121 (83.47%), Query Frame = 0
Query:    1 MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFGFFHGVVFIPVMLSILPDRLVSNFA-QKSIATVARRDSTNMVRML 120
            MAVGLVV+Y+VHIVHYFLHQ+P+I KD RIA ALGEIGPSV+VGA TTFLGIMPLAFAN   FRVFFKMF VIISFGFFHGVVFIPV+LS+LPDRLVS+   ++  A++ R   +  V +L
Sbjct:  833 MAVGLVVEYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGFFHGVVFIPVLLSMLPDRLVSHSGHEEGTASITRHTGSKKVVVL 953          
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 2.140e-41
Identity = 83/114 (72.81%), Postives = 96/114 (84.21%), Query Frame = 0
Query:    1 MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFGFFHGVVFIPVMLSILPDRLVSNFAQ-KSIATVARRDS 113
            MAVGLVVDY+VH+VHYFLHQ+P   KD RIA+ALGEIGPS+L+GA TTFLGIMPL FA+   FRVFFKMF VIISFGF+HGVVF+PVMLSILPD L+S+    K  A+V+R DS
Sbjct:  695 MAVGLVVDYMVHLVHYFLHQDPRTPKDTRIADALGEIGPSLLMGAGTTFLGIMPLVFAHNVIFRVFFKMFLVIISFGFYHGVVFVPVMLSILPDSLISSSPNDKRAASVSRDDS 808          
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: D7FY96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY96_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 8.410e-32
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0
Query:    2 AVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFG 77
            A+GLVVDYIVHIVH+FLHQ+P+I KD RIA ALGEIGPSV+VGA TTFLGI+PLAFAN   FRVFFKMF VIISFG
Sbjct:   85 ALGLVVDYIVHIVHFFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIIPLAFANTFIFRVFFKMFLVIISFG 160          
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: D7FY88_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY88_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 8.130e-31
Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 0
Query:    1 MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFG 77
            MAVGLVVDY+VHIVHYFLHQ+P+I KD RIA+ALGEIGPSV+VGA TTFLGIMPLAFAN   FRVFFKMF VIISFG
Sbjct:  756 MAVGLVVDYMVHIVHYFLHQDPSIPKDARIADALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 832          
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: A0A6H5L5K0_9PHAE (SSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K0_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.060e-30
Identity = 65/77 (84.42%), Postives = 69/77 (89.61%), Query Frame = 0
Query:    1 MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFG 77
            MAVGLVVDY+VHIVHYFLHQ+P+I KD RIA ALGEIGPSV+VGA TTFLGIMPLAFAN   FRVFFKMF VIISFG
Sbjct:  661 MAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 737          
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 3.130e-26
Identity = 58/77 (75.32%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    1 MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFG 77
            MAVGLVVDY+VHIVHYFLHQ+P+  KD RIA+ LGEIGPSV+VGA TTFLGI P+AFA    FRVFFKMF +II FG
Sbjct:  773 MAVGLVVDYMVHIVHYFLHQDPDRDKDVRIADGLGEIGPSVVVGAATTFLGITPMAFAANHVFRVFFKMFLIIIGFG 849          
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Match: A0A7S2WB03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB03_9STRA)

HSP 1 Score: 101 bits (251), Expect = 3.770e-23
Identity = 56/118 (47.46%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    1 MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFLGIMPLAFANMAAFRVFFKMFFVIISFGFFHGVVFIPVMLSILPDRLVSNFAQKSIATVARRDSTNMVR 118
            MAVGLVVDY  HI+HY+L Q  +    +R+ +AL EIGPSVL+G  TTFLG+MPLAFA    FR FF+MF  II +G  HG++F+P ++  LP   VS +     +   + D     R
Sbjct:  221 MAVGLVVDYTAHILHYYLQQPFHKEPMERLRDALVEIGPSVLLGCFTTFLGVMPLAFAQSVIFRTFFRMFLSIIVYGAAHGLIFLPAIIPSLPFGDVSEYVDPEKSVKRKTDQEEQGR 338          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY89_ECTSI4.410e-4679.13Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JGQ4_9PHAE1.940e-4475.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FY98_ECTSI3.120e-4473.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FY95_ECTSI1.250e-4371.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCK4_ECTSI2.140e-4172.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FY96_ECTSI8.410e-3281.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FY88_ECTSI8.130e-3184.42SSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L5K0_9PHAE1.060e-3084.42SSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LCK9_ECTSI3.130e-2675.32Similar to Patched domain-containing protein 3, pa... [more]
A0A7S2WB03_9STRA3.770e-2347.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1640.10coord: 1..104
e-value: 1.7E-11
score: 45.8
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 1..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..69
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 1..92
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 41..63
IPR003392Protein patched/dispatchedPFAMPF02460Patchedcoord: 1..92
e-value: 1.8E-19
score: 69.4
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 1..91
score: 14.127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig98contigEcto-sp6_S_contig98:447509..448118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig98.18783.1mRNA_Ecto-sp6_S_contig98.18783.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig98 447178..448322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig98.18783.1 ID=prot_Ecto-sp6_S_contig98.18783.1|Name=mRNA_Ecto-sp6_S_contig98.18783.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=123bp
MAVGLVVDYIVHIVHYFLHQNPNISKDDRIANALGEIGPSVLVGAMTTFL
GIMPLAFANMAAFRVFFKMFFVIISFGFFHGVVFIPVMLSILPDRLVSNF
AQKSIATVARRDSTNMVRMLCI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003392Ptc/Disp
IPR000731SSD