prot_Ecto-sp6_S_contig98.18764.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig98.18764.1
Unique Nameprot_Ecto-sp6_S_contig98.18764.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length260
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18764.1 vs. uniprot
Match: A0A6H5KHY4_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHY4_9PHAE)

HSP 1 Score: 451 bits (1159), Expect = 3.760e-159
Identity = 223/243 (91.77%), Postives = 229/243 (94.24%), Query Frame = 0
Query:    1 MFRIFDPYAMALSLLVGGVGFCTTFYFNTEMSEWGKDEIAYPMMAMIYVYARNARFFESDEESSAKILQGHGGGA------AAEGEDGKFQAPSPVGVPGLVTVKGPPLAVPKAGSLAVVFFFATWCDSCEQVLPAFLAVAGRYIDEGISFAGVTQEGEEELRYFVETYQRSLRPITLLADEQGVLTAGYQGEHRAKTIPHCYIVRGRSGDTGAGAGFGVVEWHGHPARLEAALGYLMDDDEA 237
            MFRIFDPYA+ALSLLVGGVGFCTTFYFNTE+SEWGKDEIAYPMMAMIYVYARNARFFESDEESSAKIL GHGGG       AAEGEDGKFQ PSPVGVPGLVTVKGPPLA PKAGSLAVVFFFATWCDSCEQVLPAFLAVA RYIDEGISFAGVTQEGEEELRYF+ETYQRSLRP+TLLADEQGVLTAGYQ E+RAK IPHCYIVRG SGDTGAGAGFGVVEWHGHPARLEAALGYLMD+DEA
Sbjct:    1 MFRIFDPYAVALSLLVGGVGFCTTFYFNTEISEWGKDEIAYPMMAMIYVYARNARFFESDEESSAKILGGHGGGXXXXXXKAAEGEDGKFQVPSPVGVPGLVTVKGPPLAAPKAGSLAVVFFFATWCDSCEQVLPAFLAVAARYIDEGISFAGVTQEGEEELRYFIETYQRSLRPVTLLADEQGVLTAGYQRENRAKAIPHCYIVRGVSGDTGAGAGFGVVEWHGHPARLEAALGYLMDNDEA 243          
BLAST of mRNA_Ecto-sp6_S_contig98.18764.1 vs. uniprot
Match: A0A7S2Y039_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y039_9STRA)

HSP 1 Score: 108 bits (271), Expect = 4.530e-25
Identity = 75/235 (31.91%), Postives = 118/235 (50.21%), Query Frame = 0
Query:    3 RIFDPYAMALSLLVGGVGFCTTF-YFNTEMSEWGKDEIAYPMMAMIYVYARNARFFESDEESSAKILQGHGGGAAAEGEDGKFQAPSPVGVPGLVTVKGPPLAVPKAGSLAVVF-FFATWCDSCEQVLPAFLAVAGRYIDEGISFAGVTQEGEEELRYFVETYQRSLRPITLLADEQGVLTAGYQGEHRAKTIPHCYIVRGRSGDTGAGAGFGVVEWHGHPARLEAALGYLMDDD 235
            R FD +A+  +L++  +GFC ++ Y   E   +   E   P+   +YVY RNARFF+ D + ++      G G+A +    +   P    + GL  ++G   + P  GS  +V  F+ATWC   ++ L         + D+G+    +++E    LR F+ +  RSL     LA E G LT  YQ     KT+PH Y++ GRSG          VEWHGHP +++A L  ++ +D
Sbjct:   31 RFFDAFALIQALVLAAIGFCLSWWYLGWEYLTYR--EFLLPIGCAVYVYMRNARFFQEDGDGTS------GKGSAKD----QISKPLAAELEGLTFLQG---SSPSMGSGPIVLLFWATWCGHSKKSLVPLNRTHASFKDQGVQVVAISREEVGVLREFLPSVGRSL--AYALASEDGRLTQKYQRAFGVKTVPHAYVI-GRSGR---------VEWHGHPTQIDAVLDEVISND 238          
BLAST of mRNA_Ecto-sp6_S_contig98.18764.1 vs. uniprot
Match: A0A7S0LWB5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LWB5_9CRYP)

HSP 1 Score: 64.3 bits (155), Expect = 6.270e-9
Identity = 45/136 (33.09%), Postives = 68/136 (50.00%), Query Frame = 0
Query:   95 LVTVKGPPLAVPKAGSLAVVFFFATWCDSCEQVLPAFLAVAGRYIDEGISFAGVTQEGEEELRYFVETY-QRSLRPITLLADEQGVLTAGYQGEHRAKTIPHCYIVRGRSGDTGAGAGFGVVEWHGHP-ARLEAAL 228
            L  V+G     PKAG++ VV F+ATWC  C + +P    +  RY D+G+   G++ E  +++R FVE   Q+   P+    D + V  + Y      + IP  ++V GR G          V W GHP A L+ A+
Sbjct:   64 LTYVQGDAAERPKAGTVTVVEFWATWCPPCVRSIPHLSELYTRYKDQGLDVVGISNESVDKVRPFVEKMGQKFNYPVA--CDPRSVNASNYP----VQGIPAAFLV-GRDG---------TVLWSGHPMAGLDQAV 183          
BLAST of mRNA_Ecto-sp6_S_contig98.18764.1 vs. uniprot
Match: A0A517MLY1_9BACT (Thiol-disulfide oxidoreductase ResA n=1 Tax=Roseimaritima multifibrata TaxID=1930274 RepID=A0A517MLY1_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 1.190e-6
Identity = 38/137 (27.74%), Postives = 60/137 (43.80%), Query Frame = 0
Query:  107 KAGSLAVVFFFATWCDSCEQVLPAFLAVAGRYIDEGISFAGVTQEGEEELRYFVE---------TYQRSLRPITLLADEQGVLTAGYQGEHRAKTIPHCYIVRGRSGDTGAGAGFGVVEWHGHPARLEAALGYLMDD 234
            ++G + +V F+ATWC  C   +P       +Y D+G+    V++E  E +  F+E         TY+      +L  D        Y        IP  +IV G+SG         ++EW GHP R+E  L  ++ D
Sbjct:   63 ESGKVYIVEFWATWCGPCIAAMPHLSETQQKYADQGVQLISVSREPLETVETFLEKPVRNEEDKTYRELTSTYSLTCDPDRSTFEDYFQAAGQTGIPCAFIV-GKSG---------LIEWIGHPMRMEEPLEQVLAD 189          
BLAST of mRNA_Ecto-sp6_S_contig98.18764.1 vs. uniprot
Match: A0A517SB39_9PLAN (Thiol-disulfide oxidoreductase ResA n=1 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517SB39_9PLAN)

HSP 1 Score: 58.5 bits (140), Expect = 2.760e-6
Identity = 43/142 (30.28%), Postives = 63/142 (44.37%), Query Frame = 0
Query:   98 VKGPPLAVPKAGSLAVVFFFATWCDSCEQVLPAFLAVAGRYIDEGISFAGVTQEGEEELRYFVETYQR------SLRPITLLADEQGVLTAGYQGEHRAKTIPHCYIVRGRSGDTGAGAGFGVVEWHGHPARLEAALGYLMD 233
            VKG  +   K G + VV F+ATWC  C   +P    +  +Y D+     GV+ E   ++  F++  Q+      +     L  D  G     Y      + IP  +IV GR G         VVEW GHPAR++  L  ++D
Sbjct:   60 VKGEKVDGFKPGQVYVVEFWATWCGPCLATMPHLAELQTKYGDKA-QMIGVSTEETSKVADFLKDEQKEGVTWDATITYRLAMDVDGKTNEAYMSAAGERGIPTAFIV-GREG---------VVEWIGHPARMDEPLAKVVD 190          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KHY4_9PHAE3.760e-15991.77Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2Y039_9STRA4.530e-2531.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0LWB5_9CRYP6.270e-933.09Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A517MLY1_9BACT1.190e-627.74Thiol-disulfide oxidoreductase ResA n=1 Tax=Roseim... [more]
A0A517SB39_9PLAN2.760e-630.28Thiol-disulfide oxidoreductase ResA n=1 Tax=Caulif... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 109..195
e-value: 9.9E-9
score: 35.2
NoneNo IPR availableGENE3D3.40.30.10coord: 97..207
e-value: 1.3E-11
score: 46.5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..57
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 84..203
score: 8.656
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 109..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig98contigEcto-sp6_S_contig98:240626..243968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig98.18764.1mRNA_Ecto-sp6_S_contig98.18764.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig98 240581..244806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig98.18764.1 ID=prot_Ecto-sp6_S_contig98.18764.1|Name=mRNA_Ecto-sp6_S_contig98.18764.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=260bp
MFRIFDPYAMALSLLVGGVGFCTTFYFNTEMSEWGKDEIAYPMMAMIYVY
ARNARFFESDEESSAKILQGHGGGAAAEGEDGKFQAPSPVGVPGLVTVKG
PPLAVPKAGSLAVVFFFATWCDSCEQVLPAFLAVAGRYIDEGISFAGVTQ
EGEEELRYFVETYQRSLRPITLLADEQGVLTAGYQGEHRAKTIPHCYIVR
GRSGDTGAGAGFGVVEWHGHPARLEAALGYLMDDDEAVVTAGEHAVTLCG
EEMEVGDRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf