prot_Ecto-sp6_S_contig97.18714.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig97.18714.1
Unique Nameprot_Ecto-sp6_S_contig97.18714.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length385
Homology
BLAST of mRNA_Ecto-sp6_S_contig97.18714.1 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 1.370e-115
Identity = 217/438 (49.54%), Postives = 275/438 (62.79%), Query Frame = 0
Query:    4 IVVLRIVCMCLTTAYGLVSLSHITATWMLRKDFSFAAVHASPLVSVVPGRLVGEFVAVWAVSRTVLFPGLRSLLVLQIVNIPLTAFCFVGAYIARGLRVLMMYTPSRRQRWGRHLKKEGATVKVLLAAYAIVQVAAWIAVQHVGLARVGSFMVIVAMIESLITLGASLVLFGKLRRTNDIFEVSLEIRKVGACALLTTVMITMLGFVPAGILDVYMILFYTVRFHVVVWITNIEPAREIL-RYSAAPRSRRTV--LLPFLPKLTKGESTVAVDTTEDHV-SISQRSIKTTVKLDETLQQILLSTPLLQAFKEYCLRALCGEDVV---------------------------------------------------------------------AVSLDGAAKQVGMMLKDKLFDRFRETDQFKQITAKSALKAPGDVK 368
            I VLR+  +CLT  Y LV+LSHI+ATW+LRKDF FA    SP++    G L G      AVSRTV+FPGLRSL +L+I +IPLTA C V AYI RGLRV++MYTPSRRQRWGR+LKKE A VKVLL AY IV+VAAWI V+HVGLARV SFMV V  I++++TL ASL LFG+LRRT D+F+VSLEI++ GACALLT+VMI  LG +PAG+L+ Y++LFYTVRFHV++W+TNI+PARE L R  A P +R  +  L P++P    G  TVA+D+ E  V + S    K+TVKLD+ +++IL    LL+AF+E+C +ALC E ++                                                                     A  LD AAK+VG MLK+ L+D+FR+TDQFKQIT        GD K
Sbjct:    6 ITVLRVGYVCLTNVYCLVTLSHISATWVLRKDFYFAV--RSPVLMTASG-LAGVLAGSTAVSRTVMFPGLRSLFILRIFSIPLTALCLVVAYILRGLRVIVMYTPSRRQRWGRYLKKEAAMVKVLLTAYVIVEVAAWIVVRHVGLARVASFMVTVVKIDTVVTLSASLALFGQLRRTQDVFKVSLEIQRAGACALLTSVMIMFLGSIPAGVLEFYLVLFYTVRFHVILWLTNIQPARERLGRRDATPNTRGIMAKLFPYVPWRKHG-GTVAIDSAECMVLAASTHCSKSTVKLDDAMEEILRCPVLLEAFEEFCRKALCSESILFLKAAWAFNDSVYASTANEDTNFALFMDIFDKYIKDGSPFEINIESKTKSFIMKRTDKEAFKQLRLDDAARGLDAAAKEVGKMLKENLYDKFRQTDQFKQITGVLFSTKAGDDK 439          
BLAST of mRNA_Ecto-sp6_S_contig97.18714.1 vs. uniprot
Match: D8LLA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA8_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 2.570e-79
Identity = 177/384 (46.09%), Postives = 180/384 (46.88%), Query Frame = 0
Query:    1 TGIIVVLRIVCMCLTTAYGLVSLSHITATWMLRKDFSFAAVHASPLVSVVPGRLVGEFVAVWAVSRTVLFPGLRSLLVLQIVNIPLTAFCFVGAYIARGLRVLMMYTPSRRQRWGRHLKKEGATVKVLLAAYAIVQVAAWIAVQHVGLARVGSFMVIVAMIESLITLGASLVLFGKLRRTNDIFEVSLEIRKVGACALLTTVMITMLGFVPAGILDVYMILFYTVRFHVVVWITNIEPAREILRYSAAPRSRRTVLLPFLPKLTKGESTVAVDTTEDHVSISQRSIKTTVKLDETLQQILLSTPLLQAFKEYCLRALCGEDVVAVSLDGAAKQVGMMLKDKLFDRFRETDQFKQITAKSALKAPGDVKPESYGNAVNVNDRHPS 384
            TGIIVVLRIVCMCLT AYGLVSL HITATWMLRKD  FA                                                                                                              RVGSFMVIVAMIESLITLGASLVLFGKLRRTNDIFEVSLEIRKVGACALLTT                                                                                        VK+DETLQQILLSTPLLQAF+EYCLRALCGEDVVA SLDGAAK+VGMMLKDKLFDRFRETDQFKQITAKSALKAPGDV PESYGNAVNVNDRHPS
Sbjct:    4 TGIIVVLRIVCMCLTIAYGLVSLGHITATWMLRKDLYFAV-------------------------------------------------------------------------------------------------------------RVGSFMVIVAMIESLITLGASLVLFGKLRRTNDIFEVSLEIRKVGACALLTT----------------------------------------------------------------------------------------VKVDETLQQILLSTPLLQAFEEYCLRALCGEDVVAASLDGAAKEVGMMLKDKLFDRFRETDQFKQITAKSALKAPGDVIPESYGNAVNVNDRHPS 190          
BLAST of mRNA_Ecto-sp6_S_contig97.18714.1 vs. uniprot
Match: A0A6H5K976_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K976_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.480e-40
Identity = 137/434 (31.57%), Postives = 201/434 (46.31%), Query Frame = 0
Query:   44 SPLVSVVPGRLVGEFVAVWAVSRTVLFPGLR----SLLVLQIVNIPLTAFCFVGAYIARGLRVLMMYTPSRRQRWGRHLKKEGATVKVLLAAYAIVQVAA----------------------------------WIAVQHVGLA--------RVGSFMVIVAMIESLITLGASLVLFGKLRRTNDIFEVSLEIRKVGACALLTT--VMITMLGFVPAGILDVYMILFYTVRFHVVVWITNIEPAREILRYSAA-PRSRRTV--LLPFLPKLTKGESTVAVDT-TEDHVSISQRSIK-TTVKLDETLQQILLSTPLLQAFKEYCLRALCGEDVVAVS---------------------------------------------------------------------LDGAAKQVGMMLKDKLFDRFRETDQFKQI 355
            SPL+  V G L G  V+VWA + T            L    I+ +PL    FVGAYI RG+R+L+MY P  R RWGR+  KE   VKV++  + ++Q+ +                                  W+      L         RV   M+ V  ++ L+T+GASL+L GKL RT D+F++S+EIR VG  ALL    +M  ++  VPA +L+ Y+ILF T RF   VWITNI+P R++L+  A  P +   +  L P++P  T+  + VA+D   E  V     S K T+VKLD+ L++IL   PLL+AF E+C +ALC E ++ ++                                                                     LD A K++G ML++ L+++FR T+QFK+I
Sbjct:   52 SPLLGTVSG-LAG--VSVWAFATTGAVINSEVVNAQLAFAPIITVPLVLVAFVGAYIIRGIRLLVMYNPHMRHRWGRYFNKETFMVKVVIVLFVVLQLVSSLAXXXXXXXXXXXTGDDNTMLGETFHEALQAMRWLTTLFTELLIRIKFAAYRVAGAMIAVIAVDMLLTIGASLMLVGKLARTKDMFDMSVEIRSVGGFALLALGELMGIVIPMVPATVLNFYLILFLTTRFGTAVWITNIQPVRKVLQRRADHPINAGGIASLFPYVPWTTRSGA-VAIDVMNESKVFTKPSSSKFTSVKLDDKLEEILRFPPLLEAFGEFCRKALCSESLMFLTAGKDFHESLDASDADYDTIFARFNEIVDQYIRDGSSFEVNIESKTKAQILSRTSMSSFKELPLDDAVCILDLAVKEIGKMLQENLYNKFRSTEQFKEI 481          
BLAST of mRNA_Ecto-sp6_S_contig97.18714.1 vs. uniprot
Match: A0A6H5KBN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBN3_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 6.540e-22
Identity = 63/148 (42.57%), Postives = 89/148 (60.14%), Query Frame = 0
Query:    2 GIIVVLRIVCMCLTTAYGLVSLSHITATWMLRKDFSFAAVHASPLVSVVPGRLVGEFVAVWAVSRTVLFPG-LRSLLVLQIVNIPLTAFCFVGAYIARGLRVLMMYTPSRRQRWGRHLKKEGATVKVLLAAYAIVQVAAWIAVQHVGL 148
            G I+ L +V M +   + L +LSHI+A W LRKDF F+    SPL++   G LVG  +  +AV+R ++ P  L    +  I+ +PL    F+G Y+ RG+R+L+MY P+ R  WGR    E A VK+LL A+ IV+V AW AV   GL
Sbjct:   23 GHIIALDVVLMSMLVGFTLTALSHISAAWRLRKDFFFSV--RSPLLATTSG-LVGVVLGAFAVARLIVIPDKLVVHSISLIIFVPLMELGFLGPYVMRGIRLLVMYNPATRTHWGRFFTSELAVVKILLVAFGIVEVIAWSAVLLFGL 167          
BLAST of mRNA_Ecto-sp6_S_contig97.18714.1 vs. uniprot
Match: D7FYZ5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ5_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 7.600e-22
Identity = 106/345 (30.72%), Postives = 168/345 (48.70%), Query Frame = 0
Query:   15 TTAYGLVSLSHITATWMLRKDFSFAAVHASPLVSVVPGRLVGEFVAVWAVSRTVLFPGLRSLLVLQIVNIPLTAFCFVGAYIARGLRVLMMYTPSRRQRWGRHLKKEGATVKVLLAAYAIVQVAAWIAV-----------QH-----VGLARVGSFMVIVAMIESLITLG--------ASLVLF--GKLRRTNDIFEVSLEI---RKVGACALLTTVMITMLGFVPAG------ILDVYMILFYTVRFHVVVWITNIEPAREILRYSAAPRSRRTVLLPFLPKLTKGESTVAVDTTED-HVSISQRSIKTTVKLDETLQQILLSTPLLQAFKEYCLRALCGEDVV 323
            T  + LVSLS+  A   LRK+F  A    SP+++V+ G +         +  T+ +    S    +I+ +PL    F   YI RG+R+L+M+TP  RQRWG  L++    + ++LA + ++QV  W  V           QH      G++ V + +V V    +  T G         S++    G L R      + L I   R V  C  L   M+  +G   AG      ++ ++M++F  VRFH  +WITNI+P RE+LR S+  +       P++P        VAV   E  HV+ + R + T ++L   L+ I+ + PLL+AF  +C +ALCGE ++
Sbjct:   81 TVVFSLVSLSYCAAMGQLRKEFFIAL--RSPMLAVMSGAIGILISGPEIIGMTLTYD--MSAGPEKILCVPLM-LSFTATYILRGVRLLIMFTPRSRQRWGSFLRERNF-IPIVLAIFLVLQVVVWSFVPTYGVPIKCWIQHNCVKSQGISFVWNMLVCVPRAGTTRTNGHPSFNCRWCSVLREAPGALPRATLFTCLHLSILNFRSVWCCECLDAAMV--MGMKAAGEFYTPTLMRMHMVVFMVVRFHTALWITNIKPVREVLRQSSDRKDYHVPWFPYVPWRRSASGKVAVGMNETMHVTCTSRPLST-IQLGR-LETIINTPPLLEAFDSFCQKALCGESIL 415          
BLAST of mRNA_Ecto-sp6_S_contig97.18714.1 vs. uniprot
Match: A0A6H5K6R2_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R2_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 4.030e-5
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0
Query:  241 EILRYSAAPRSRRT---------VLLPFLPKLTKGESTVAVDTTEDHVS---ISQRSIKTTVKLDETLQQILLSTPLLQAFKEYCLRALCGEDVV 323
            + +R S  PR RR           LLP++P   +  S VAVD      +   +S  +I  +VKLD+ L+QIL  TPLL+AF+E+C +ALC E ++
Sbjct:   10 QSIRASVLPRRRRNNYNNGGIIASLLPYIP-WREDASIVAVDAVGRRFTSRGVSLGNINRSVKLDDALEQILCFTPLLEAFEEFCQKALCIESLM 103          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig97.18714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LLA9_ECTSI1.370e-11549.54RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLA8_ECTSI2.570e-7946.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K976_9PHAE1.480e-4031.57RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KBN3_9PHAE6.540e-2242.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYZ5_ECTSI7.600e-2230.72RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K6R2_9PHAE4.030e-538.95RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..236
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 237..384
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..65
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 196..218
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig97contigEcto-sp6_S_contig97:391665..398280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig97.18714.1mRNA_Ecto-sp6_S_contig97.18714.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig97 391665..398280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig97.18714.1 ID=prot_Ecto-sp6_S_contig97.18714.1|Name=mRNA_Ecto-sp6_S_contig97.18714.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=385bp
TGIIVVLRIVCMCLTTAYGLVSLSHITATWMLRKDFSFAAVHASPLVSVV
PGRLVGEFVAVWAVSRTVLFPGLRSLLVLQIVNIPLTAFCFVGAYIARGL
RVLMMYTPSRRQRWGRHLKKEGATVKVLLAAYAIVQVAAWIAVQHVGLAR
VGSFMVIVAMIESLITLGASLVLFGKLRRTNDIFEVSLEIRKVGACALLT
TVMITMLGFVPAGILDVYMILFYTVRFHVVVWITNIEPAREILRYSAAPR
SRRTVLLPFLPKLTKGESTVAVDTTEDHVSISQRSIKTTVKLDETLQQIL
LSTPLLQAFKEYCLRALCGEDVVAVSLDGAAKQVGMMLKDKLFDRFRETD
QFKQITAKSALKAPGDVKPESYGNAVNVNDRHPS*
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