prot_Ecto-sp6_S_contig96.18641.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig96.18641.1
Unique Nameprot_Ecto-sp6_S_contig96.18641.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length224
Homology
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: D7FJP9_ECTSI (Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJP9_ECTSI)

HSP 1 Score: 439 bits (1128), Expect = 1.470e-155
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
Query:    1 MNGLGAPAVGGAGKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNGGVDTDSLTQRMESCCT 223
            MNGLGAPAVGGAGKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNGGVDT+SLTQRMESCCT
Sbjct:    1 MNGLGAPAVGGAGKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNGGVDTESLTQRMESCCT 223          
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: A0A835YM14_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM14_9STRA)

HSP 1 Score: 248 bits (633), Expect = 2.760e-80
Identity = 130/205 (63.41%), Postives = 157/205 (76.59%), Query Frame = 0
Query:   18 LLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNGGVDTDSLTQRMESCC 222
            LLIR+LMIG+SSVGKTSLVLRYDKRGFN +FTTTIGVDYSDR+L +D R VKLQIWDTAGQERFHSLTTSFFKRAEGF LV+DVS+R+SF++V+ WM DI EQGK  SDVV+ GNKCD++ R VA+ E E+LA    VPY E SAK+N+NV+  F  LAS VK RL+A +AA +   A ET+ L         T +  ++  +CC
Sbjct:   22 LLIRVLMIGESSVGKTSLVLRYDKRGFNAKFTTTIGVDYSDRMLTVDARAVKLQIWDTAGQERFHSLTTSFFKRAEGFALVFDVSDRRSFDAVARWMGDIREQGKADSDVVLVGNKCDVKERAVAKGEAEKLAKHFAVPYFEASAKDNVNVDVIFETLASSVKRRLDA-KAADEAKKASETVTLG--------TAAEPKKKSACC 217          
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: A0A836CM00_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM00_9STRA)

HSP 1 Score: 238 bits (608), Expect = 8.070e-77
Identity = 116/165 (70.30%), Postives = 138/165 (83.64%), Query Frame = 0
Query:   24 MIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQA 188
            MIG+SSVGKTSLVLRYDKRGFN +FTTTIGVDYSDR+L +DG+Q+KLQIWDTAGQERFHSLTTSFFKRAEGFVL +DVS+R SFESV+ WMKDI   GK  SDVV+ GNKCD++ R VA+EE + LAA+  VPY E SAKE++NV+  F  +A+ +K RL+A  A
Sbjct:    1 MIGESSVGKTSLVLRYDKRGFNSKFTTTIGVDYSDRMLTIDGKQIKLQIWDTAGQERFHSLTTSFFKRAEGFVLCFDVSDRASFESVARWMKDIEASGKPDSDVVLVGNKCDMKERAVAKEEAQALAAQFRVPYFEASAKEDVNVDAVFSTVANNIKRRLDAKAA 165          
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: A0A6V1KKE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KKE1_HETAK)

HSP 1 Score: 209 bits (533), Expect = 3.270e-65
Identity = 106/196 (54.08%), Postives = 141/196 (71.94%), Query Frame = 0
Query:   14 KPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNG 207
            K  P +IRILM+GDSSVGKTSLV+R+D +GF  ++ TTIGVDYSDRL+E+DG + KLQ+WDTAGQERF +LT+SFFKRA+GF L YD+S+R SF++V+ WMKDI EQ   G ++++ GNKCD+    REVA +EG  LA E G P++E SAK + NV++ F  +AS V   +      + GAG  + + L   R G
Sbjct:    8 KKQPPIIRILMVGDSSVGKTSLVMRFDDKGFLNKYATTIGVDYSDRLVEVDGDEYKLQVWDTAGQERFRALTSSFFKRADGFCLCYDISSRHSFDNVNRWMKDICEQAPSGFNLILVGNKCDVPEARREVAYQEGVDLAGEFGAPFLEASAKTDRNVDDVFMTVASAV---VAQKSGGSRGAGTRQNINLPSSRGG 200          
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: A0A7S2AY15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY15_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.840e-61
Identity = 100/179 (55.87%), Postives = 127/179 (70.95%), Query Frame = 0
Query:   19 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGA 195
            ++RILMIGDS VGKTSLVLRYD+  F+ +F TTIGVDY D++++++G+ VKLQIWDTAGQERF SLT++FF RA+G VL YDVS+R S+E + TWM +I +      DVVICG+KCD+    R+V  EEG+ LA + GVPY E SAK N NVE  F  LA+ +  R         GA A
Sbjct:   18 VVRILMIGDSGVGKTSLVLRYDEDAFSHKFVTTIGVDYRDKVVQVNGKSVKLQIWDTAGQERFRSLTSNFFSRADGMVLAYDVSDRTSYEHIKTWMSEIRKHAPEDVDVVICGSKCDIDATDRKVTEEEGQTLAEDEGVPYFEASAKANTNVEAMFMQLATTIVDRKNGVAGGAGGAAA 196          
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: A0A1E7F4E5_9STRA (Ras-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4E5_9STRA)

HSP 1 Score: 194 bits (493), Expect = 9.190e-59
Identity = 103/215 (47.91%), Postives = 141/215 (65.58%), Query Frame = 0
Query:   13 GKPTPL--------LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTR----LEASQAATDGAGAGETLRLNGGRNGGVDTDSL 214
            G+P PL        ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  EEG+QLA E GV + ETSA   +NVE+ F  L++ +K +     EA       +G G +    G  NGG  T  +
Sbjct:    8 GQPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGVPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDNDRVVTLEEGKQLAEEYGVEFFETSALTGINVEKMFYGLSTTIKRKRIDEFEAGGNGNSASGGGASTAEQGSVNGGGATQPV 222          
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: A0A7S2SVP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVP5_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.670e-57
Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 0
Query:   15 PTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDL--QGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRV 179
            P   ++R+LMIGDS+VGKTSLVLRYD+  F+ +F TTIGVDY D+++++ G  VKLQIWDTAGQERF +LT +FF RA+G VL YDVS R SFE V  W + IVE+      +++CG KCD   + REV++E+GE LA EL +P+ ETSAK N NV E F  LA+ V
Sbjct:    8 PKRKVVRLLMIGDSNVGKTSLVLRYDENRFSHKFVTTIGVDYRDKVVDIHGANVKLQIWDTAGQERFRALTANFFSRADGIVLAYDVSKRTSFEGVRRWHEQIVEKAAPEVQMLLCGTKCDCSPEEREVSQEDGESLAKELAIPFFETSAKGNRNVAEAFMTLATAV 174          
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: A0A448ZGV8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGV8_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.890e-57
Identity = 101/216 (46.76%), Postives = 141/216 (65.28%), Query Frame = 0
Query:   11 GAGKPTPL--------LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTR----LEASQAATDGAGAGETLRLNGGRNGGVDTDS 213
            G+G+P PL        ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  +EG+QLA E GV + ETSA    NVE+ F  L++ +K +     E S  +  G G  +     G  +  +D  S
Sbjct:   10 GSGQPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGVPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDNDRVVTYDEGKQLAEEYGVEFFETSALTGQNVEKMFYGLSTTIKRKRIDEFEGSGGSASGGGGADQNAAGGEGSQKIDLGS 225          
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: A0A6S9AIZ9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9AIZ9_9STRA)

HSP 1 Score: 189 bits (481), Expect = 5.450e-57
Identity = 102/213 (47.89%), Postives = 142/213 (66.67%), Query Frame = 0
Query:   19 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVK-TRLEASQAATDGAGA-------GETLRLNGGRNGGVDTDSLTQRMESCC 222
            ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  EEG+ LA E GV + E+SA    NVE  F +LA+ +K  R++  +AA  G+ A       G T+ L G   G  +T +    +  CC
Sbjct:   26 IVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGAPMRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDADRVVQTEEGKMLAEEYGVQFFESSALTGHNVEGMFTSLATTIKHRRIDEYEAAGGGSVANDASARGGHTVELGGAAAG--ETGAPKGALSGCC 236          
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Match: A0A1Z5K1V2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1V2_FISSO)

HSP 1 Score: 189 bits (479), Expect = 5.910e-57
Identity = 103/214 (48.13%), Postives = 140/214 (65.42%), Query Frame = 0
Query:   19 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTR-----LEASQA-ATDGAGA---GETLRLNGGRNGGVDTDSLTQRMESCC 222
            ++R+LM+GDS+ GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNKCDL   R V  EEG+QLA E GV + E+SA    NVE  F  LA+ +K +     LE   A +TDGA       T+ L     GG      + +   CC
Sbjct:    8 IVRLLMVGDSACGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGAPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKCDLDNDRVVTYEEGKQLADEYGVQFFESSALTGQNVESMFTALATTIKHKRIDDYLEGGGAPSTDGASTTTDNRTIHLAPTEGGG------SSKSPGCC 215          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJP9_ECTSI1.470e-15599.55Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YM14_9STRA2.760e-8063.41Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A836CM00_9STRA8.070e-7770.30Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1KKE1_HETAK3.270e-6554.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2AY15_9STRA2.840e-6155.87Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A1E7F4E5_9STRA9.190e-5947.91Ras-domain-containing protein n=1 Tax=Fragilariops... [more]
A0A7S2SVP5_9STRA1.670e-5756.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A448ZGV8_9STRA2.890e-5746.76Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6S9AIZ9_9STRA5.450e-5747.89Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1Z5K1V2_FISSO5.910e-5748.13Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 20..41
score: 39.13
coord: 61..83
score: 54.09
coord: 157..179
score: 40.86
coord: 123..136
score: 38.92
coord: 43..59
score: 29.26
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 20..182
e-value: 1.4E-75
score: 267.1
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 25..214
e-value: 5.7E-6
score: 35.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 21..182
e-value: 6.4E-35
score: 132.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 22..183
e-value: 1.3E-10
score: 16.6
NoneNo IPR availableGENE3D3.40.50.300coord: 18..198
e-value: 9.1E-60
score: 203.2
NoneNo IPR availablePANTHERPTHR24073:SF10coord: 13..181
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 13..181
NoneNo IPR availablePROSITEPS51419RABcoord: 14..222
score: 30.547
IPR001806Small GTPasePFAMPF00071Rascoord: 21..180
e-value: 1.9E-55
score: 186.9
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 20..175
e-value: 8.4E-27
score: 91.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig96contigEcto-sp6_S_contig96:379066..385050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig96.18641.1mRNA_Ecto-sp6_S_contig96.18641.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig96 378857..385053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig96.18641.1 ID=prot_Ecto-sp6_S_contig96.18641.1|Name=mRNA_Ecto-sp6_S_contig96.18641.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=224bp
MNGLGAPAVGGAGKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTT
TIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYD
VSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLA
AELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLR
LNGGRNGGVDTDSLTQRMESCCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase