prot_Ecto-sp6_S_contig95.18602.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig95.18602.1
Unique Nameprot_Ecto-sp6_S_contig95.18602.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length178
Homology
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: A0A6H5JIE6_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE6_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 1.120e-80
Identity = 153/180 (85.00%), Postives = 155/180 (86.11%), Query Frame = 0
Query:    1 MGLGQRKSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPPAHPVTSSPAAASTAPPPDSRA---GGAEATGKAGAGVATTTGASGMDVTGGGEDEDDPDL 177
            MGLGQRKSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDEL+VEEEKGEEMVFE+DDDLPGQGQFYCTPCARHFTD QTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKET                   PDSR    GGAEATGKAGA VATTTGASGMDVTGGGEDEDDPDL
Sbjct:    1 MGLGQRKSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELMVEEEKGEEMVFEVDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETXXXXXXXXXXXXXXXXXXXPDSRVLAVGGAEATGKAGAEVATTTGASGMDVTGGGEDEDDPDL 180          
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: A0A836CC06_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC06_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.200e-37
Identity = 73/123 (59.35%), Postives = 85/123 (69.11%), Query Frame = 0
Query:    1 MGLGQRKSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPPAHP 123
            MG+GQ+KSKG   G KTKNK          R  D+DQ+QD L    E G+ + F  DDDLPG GQFYC PCARHFTD  T  TH +SKLHKRR+KDVAQ++YTQ EA+ GAG +KE Y PAHP
Sbjct:    1 MGIGQKKSKGTSKGSKTKNKQYKRALDTKRRPMDIDQVQDILEKVAETGKPLKFAYDDDLPGGGQFYCAPCARHFTDQGTLDTHTKSKLHKRRLKDVAQKKYTQKEADAGAGKSKEVYAPAHP 123          
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: A0A024UJ99_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJ99_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.140e-34
Identity = 70/121 (57.85%), Postives = 82/121 (67.77%), Query Frame = 0
Query:    7 KSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPPAHPVTSS 127
            K KG K  H TK+           R +D+DQIQD+L  EEE G +M FE+D+DLPG GQ+YCTPC RHF     +  HI SK+HKRRMKDVAQEQYTQ EAER AG + ETY PAHP  +S
Sbjct:   14 KKKGYKRAHATKS-----------RSRDIDQIQDDLKKEEETGVKMTFELDEDLPGLGQYYCTPCGRHFITANARDVHIASKVHKRRMKDVAQEQYTQKEAERAAGKSIETYTPAHPTAAS 123          
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: A0A662Y0F3_9STRA (C2H2-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0F3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.510e-33
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = 0
Query:   12 KGGHKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPPAHP 123
            K GH TKN           R +DVDQIQD+L VE+ KG+ + FE D+DLPG GQFYCTPC RHF D  T+  HI++K+HKRR+KDVAQ+QYTQ EA  GAG T ETY PAHP
Sbjct:   20 KRGHATKN-----------RSRDVDQIQDDLRVEKLKGKPLAFEEDEDLPGLGQFYCTPCGRHFIDAITRDVHIKTKVHKRRLKDVAQKQYTQKEAMLGAGKTVETYTPAHP 120          
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: A0A024G9F2_9STRA (C2H2-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9F2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.860e-33
Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 0
Query:    7 KSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPPAHPV 124
            K KG K  H TK            R +DVDQIQD+L +E ++ + + FEID+DLPG GQ+YCTPCARHF D  T+  H+R+K+HKRR+KDV QEQYTQ EA+ GAG T+E Y PAHP 
Sbjct:   14 KVKGYKKSHSTKR-----------RSRDVDQIQDDLKLESQQNKPLKFEIDEDLPGLGQYYCTPCARHFIDATTRDLHVRTKVHKRRLKDVRQEQYTQREADLGAGKTREEYVPAHPT 120          
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: W2FRC2_PHYPR (C2H2-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2FRC2_PHYPR)

HSP 1 Score: 122 bits (307), Expect = 8.880e-33
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 0
Query:    7 KSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPPAHP 123
            K K  K GH TKN           R +D+DQIQD+L VE+  G+ M FE D+DLPG GQFYCTPC RHF D +T+  H+++K+HKRR+KDVAQ+QYTQ EA +GAG   ETY PAHP
Sbjct:   16 KKKQYKRGHATKN-----------RARDIDQIQDDLRVEKLTGKSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMQGAGKGVETYKPAHP 121          
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: A0A329S597_9STRA (C2H2-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S597_9STRA)

HSP 1 Score: 122 bits (307), Expect = 8.880e-33
Identity = 67/117 (57.26%), Postives = 81/117 (69.23%), Query Frame = 0
Query:    7 KSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPPAHP 123
            K K  K GH TKN           R +D+DQIQD+L VE+  G+ M FE D+DLPG GQFYCTPC RHF D +T+  H+++K+HKRR+KDVAQ+QYTQ EA  GAG   ETY PAHP
Sbjct:   16 KKKQYKRGHATKN-----------RARDIDQIQDDLSVEKMTGKSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMEGAGKGIETYKPAHP 121          
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: A0A3R7IPL6_9STRA (C2H2-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IPL6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.470e-32
Identity = 66/117 (56.41%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    7 KSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPPAHP 123
            K K  K GH TKN           R +D+DQIQD+L VE   G++M FE D+DLPG GQFYCTPC RHF D  T+  H+++K+HKRR+KDVAQ+QYTQ EA  GAG + E Y PAHP
Sbjct:   16 KKKQYKRGHATKN-----------RSRDIDQIQDDLCVETISGKKMAFEEDEDLPGLGQFYCTPCGRHFIDATTRDVHVKTKVHKRRLKDVAQKQYTQNEAMMGAGKSVEKYTPAHP 121          
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: A0A4D9CVU1_9STRA (C2H2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVU1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 4.580e-32
Identity = 66/108 (61.11%), Postives = 72/108 (66.67%), Query Frame = 0
Query:   15 HKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPPAH 122
            H  K K          R +DVDQIQDEL  E E+GE +    DDDLPG GQFYC PCARHF D Q    H RSK+HKRR+KDVAQEQYTQ EAER  GMT+E  PPAH
Sbjct:   16 HSAKKKQYKKALCTARRPRDVDQIQDELRAEAERGEALPMPHDDDLPGAGQFYCRPCARHFGDQQCLDHHTRSKVHKRRLKDVAQEQYTQREAERAGGMTEEVLPPAH 123          
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Match: A0A1V9ZQ49_9STRA (C2H2-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ49_9STRA)

HSP 1 Score: 120 bits (302), Expect = 5.050e-32
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 0
Query:    7 KSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELVVEEEKGEEMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETYPP 120
            K KG K GH TK+           R +D+DQIQD+L  E+  G+ M F+ID+DLPG GQFYCTPC RHF D   ++ H++SK+HKRRMKDVAQEQY+Q EA+R AG T ETY P
Sbjct:   14 KKKGYKRGHATKS-----------RNRDIDQIQDDLKKEQLTGKSMTFQIDEDLPGLGQFYCTPCGRHFMDAVARAVHLKSKVHKRRMKDVAQEQYSQKEADRAAGKTIETYVP 116          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig95.18602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIE6_9PHAE1.120e-8085.00C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CC06_9STRA2.200e-3759.35C2H2-type domain-containing protein n=1 Tax=Tribon... [more]
A0A024UJ99_9STRA1.140e-3457.85C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
A0A662Y0F3_9STRA1.510e-3360.71C2H2-type domain-containing protein n=1 Tax=Nothop... [more]
A0A024G9F2_9STRA2.860e-3355.93C2H2-type domain-containing protein n=1 Tax=Albugo... [more]
W2FRC2_PHYPR8.880e-3357.26C2H2-type domain-containing protein n=9 Tax=Phytop... [more]
A0A329S597_9STRA8.880e-3357.26C2H2-type domain-containing protein n=1 Tax=Phytop... [more]
A0A3R7IPL6_9STRA3.470e-3256.41C2H2-type domain-containing protein n=3 Tax=Phytop... [more]
A0A4D9CVU1_9STRA4.580e-3261.11C2H2-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A1V9ZQ49_9STRA5.050e-3257.02C2H2-type domain-containing protein n=1 Tax=Thraus... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 65..91
e-value: 2.6E-7
score: 30.7
NoneNo IPR availableGENE3D3.30.160.60coord: 53..115
e-value: 6.8E-27
score: 95.1
NoneNo IPR availablePANTHERPTHR46095FAMILY NOT NAMEDcoord: 14..122
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 68..90
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 66..95
score: 8.767
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 54..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig95contigEcto-sp6_S_contig95:633117..635354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig95.18602.1mRNA_Ecto-sp6_S_contig95.18602.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig95 631847..636445 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig95.18602.1 ID=prot_Ecto-sp6_S_contig95.18602.1|Name=mRNA_Ecto-sp6_S_contig95.18602.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=178bp
MGLGQRKSKGGKGGHKTKNKEYKKGHATKNRRKDVDQIQDELVVEEEKGE
EMVFEIDDDLPGQGQFYCTPCARHFTDLQTKSTHIRSKLHKRRMKDVAQE
QYTQAEAERGAGMTKETYPPAHPVTSSPAAASTAPPPDSRAGGAEATGKA
GAGVATTTGASGMDVTGGGEDEDDPDL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022755Znf_C2H2_jaz
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf