prot_Ecto-sp6_S_contig95.18576.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig95.18576.1
Unique Nameprot_Ecto-sp6_S_contig95.18576.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length212
Homology
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5KR64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR64_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 5.070e-100
Identity = 156/212 (73.58%), Postives = 171/212 (80.66%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW +FTRPD  L LNKLQ++AHS TERMWNAL+RI+SYLN TKD+GI YVRGSGLDLDVFVDSSYA + +D RSTTGLAVTVGGT VCA+TKTQPVTAQST+EAE I   EGVKEA FVRGVLSFIAPETS A IRVREDN G L   + P S+         FHFIRELFK+GKIT +YV T EQHADML KVLGR KLEYHR+AL N PM
Sbjct:    1 MWLLFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGIAYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLPM 212          
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5KJD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD2_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 4.750e-98
Identity = 156/212 (73.58%), Postives = 171/212 (80.66%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW +FTRPD  L LNKLQ++AHS TERMWNAL+RI+SYLN TKD+GITYVRGSGLDL VFVDSSYA + +D RSTTGLAVTVGGT VCA+TKTQPVTAQST+EAEDI   EGVKE  FVRGVLSFIAPETS A IRVREDN G L   + P S+         FHFIRELFK+GKIT +YV T EQHADML KVLGR KLEYHR+AL N PM
Sbjct:  148 MWLLFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLYVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEDIAAGEGVKETLFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLPM 359          
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5JU54_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU54_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 3.180e-96
Identity = 155/212 (73.11%), Postives = 171/212 (80.66%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW +FTRPD  L LNKLQ++AHS TERMWNAL+RI+SYLN TKD+GITYVRGSGLDLDVFVDSSYA + +D RSTTGLAVTVGGT VCA+TKTQPVTAQST+EAE I   E VKEA FVRGVLSFIAPETS A IRVREDN G L   + P S+         FHFIRELFK+GKIT +YV T EQHADML +VLGR KLEYHR+AL N PM
Sbjct:  160 MWLLFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAGGEAVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTEVLGRGKLEYHRKALMNLPM 371          
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 9.750e-96
Identity = 155/212 (73.11%), Postives = 167/212 (78.77%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW   TRPD  L LNKLQ++A S T R+WNAL+RI+SYLN TKD GITYVRGSGLDL VFVD+SYA NE+D RSTTGLAVTVGGT VCA+TKTQPVTAQSTSEAE +   EGVKEA FVRGVLSFIAPETS AKI+V EDN G L     P S+         FHFIRELFKSGKIT EYVPTGEQHADML KVLGR K EYHR+AL N PM
Sbjct:  162 MWTKLTRPDIALPLNKLQKIAQSPTGRIWNALVRIMSYLNFTKDFGITYVRGSGLDLSVFVDASYADNEVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTSEAEYMAAGEGVKEALFVRGVLSFIAPETSGAKIKVLEDNKGALAMFENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKVLGREKSEYHRKALMNLPM 373          
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5KCN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN6_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 9.480e-95
Identity = 154/212 (72.64%), Postives = 169/212 (79.72%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW +F RPD  L LNKLQ++AHS TERMWNAL+RI+SYLN TKD+GITYVRGSGLDLDVFVDSSYA + +D RSTTGLAVTVGGT VCA+TKTQPVTAQST+EAE I   EGVKEA FVRGVLSFIAPETS A IRV EDN G L   + P S+         FHFIRELFK+GKIT +YV T EQHADML KVLGR KLEYHR+AL N  M
Sbjct:  202 MWLLFMRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVLEDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLSM 413          
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5L6D6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D6_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 1.310e-93
Identity = 157/212 (74.06%), Postives = 172/212 (81.13%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW +FTRPD  L LNKLQ++AHS TERMWNAL+RI+SYLN TKD+GITYVRGSGLDLDVFVDSSYA + +D RSTTGLAVTVGGT VCA+TKTQPVTAQST+EAE I   EGVKEA FVRGVLSFIAPETS A IRVREDN G L   + P S+         FHFIRELFK+GKIT +YV T EQHADML KVLGR KLEYHR+AL N PM
Sbjct:  595 MWLLFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLPM 806          
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5JVA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA8_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 3.150e-93
Identity = 152/212 (71.70%), Postives = 164/212 (77.36%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW   TRPD  L LNKLQ++ HS   RMWNAL+RI+SYLN TKD GITYV GSGLDL VFVD+SYA NE+D RSTTGLAVTVGGT VCA+TKTQPVTAQSTSEAE +   EGVKEA FV GVLSFIAPETS AKI+V EDN G L     P S+         FHFIRELFKSGKIT EYVPTGE HADML KVLGR KLE+HR+AL N PM
Sbjct:  136 MWTKLTRPDIALPLNKLQKIGHS-PGRMWNALVRIISYLNFTKDFGITYVLGSGLDLSVFVDASYADNEVDKRSTTGLAVTVGGTVVCASTKTQPVTAQSTSEAEYMAAGEGVKEALFVHGVLSFIAPETSEAKIKVLEDNKGALALIENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEHHADMLTKVLGREKLEFHRKALMNLPM 346          
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5JFV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV7_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 9.890e-93
Identity = 148/212 (69.81%), Postives = 164/212 (77.36%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW   TRPD TL LNKLQ +A+S T R+WNAL+RI+SYLN TKD GITYVRGSG D  VFVD+SYA NE+D RSTTGLAVTVGGT VCA+TK Q V+AQSTSEAE +   EGV+EA FVRGVLSFIAPETS AKI+V EDN G L     P S+         FH+IRELFKSGKIT EYVPTGEQHADML KVLGR K EYHR+AL N P+
Sbjct:   52 MWTKLTRPDITLPLNKLQEIAYSPTARIWNALVRIMSYLNFTKDFGITYVRGSGQDQSVFVDASYADNEVDRRSTTGLAVTVGGTVVCASTKAQRVSAQSTSEAEYMAAGEGVREALFVRGVLSFIAPETSEAKIKVLEDNKGALALIENPFSSARSKHIDVRFHYIRELFKSGKITAEYVPTGEQHADMLTKVLGREKFEYHRKALMNLPI 263          
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5K9E2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E2_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 8.150e-92
Identity = 157/212 (74.06%), Postives = 172/212 (81.13%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW +FTRPD  L LNKLQ++AHS TERMWNAL+RI+SYLN TKD+GITYVRGSGLDLDVFVDSSYA + +D RSTTGLAVTVGGT VCA+TKTQPVTAQST+EAE I   EGVKEA FVRGVLSFIAPETS A IRVREDN G L   + P S+         FHFIRELFK+GKIT +YV T EQHADML KVLGR KLEYHR+AL N PM
Sbjct:  848 MWLLFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLPM 1059          
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Match: A0A6H5K0Q0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q0_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 1.610e-91
Identity = 155/212 (73.11%), Postives = 169/212 (79.72%), Query Frame = 0
Query:    1 MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYVRGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQSTSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCR-PLSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLEYHRQALRNPPM 211
            MW +FTRPD  L LNKLQ++AHS TERMWNAL+RI+SYLN TKD+GITYVRGSGLDLDVFVDSSYA + +D RSTTGLAVTVGGT VCA  KTQPVTAQST+EAE +   EGVKEA FVRGVLSFIAPETS A IRVREDN G L   + P S+         FHFIRELFK GKIT +YV T EQHADML KVLGR KLEYHR+AL N PM
Sbjct:  616 MWLLFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCAFMKTQPVTAQSTTEAEYVAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKVGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLPM 827          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig95.18576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR64_9PHAE5.070e-10073.58Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJD2_9PHAE4.750e-9873.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU54_9PHAE3.180e-9673.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWY8_9PHAE9.750e-9673.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KCN6_9PHAE9.480e-9572.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L6D6_9PHAE1.310e-9374.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVA8_9PHAE3.150e-9371.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFV7_9PHAE9.890e-9369.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9E2_9PHAE8.150e-9274.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K0Q0_9PHAE1.610e-9173.11Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 4..145
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig95contigEcto-sp6_S_contig95:316254..316889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig95.18576.1mRNA_Ecto-sp6_S_contig95.18576.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig95 314560..316889 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig95.18576.1 ID=prot_Ecto-sp6_S_contig95.18576.1|Name=mRNA_Ecto-sp6_S_contig95.18576.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=212bp
MWAMFTRPDTTLSLNKLQRVAHSHTERMWNALLRIVSYLNATKDIGITYV
RGSGLDLDVFVDSSYAANEIDMRSTTGLAVTVGGTAVCAATKTQPVTAQS
TSEAEDITVREGVKEASFVRGVLSFIAPETSRAKIRVREDNAGLLPWCRP
LSARPGASTSTLFHFIRELFKSGKITPEYVPTGEQHADMLAKVLGRAKLE
YHRQALRNPPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like