prot_Ecto-sp6_S_contig94.18546.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig94.18546.1
Unique Nameprot_Ecto-sp6_S_contig94.18546.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length144
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: D7G2X6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2X6_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 2.510e-92
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query:    1 MPLSTALSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQLLTLVP 143
            MPLSTALSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQLLTLVP
Sbjct:    1 MPLSTALSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQLLTLVP 143          
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: A0A7S2V8D6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8D6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.700e-32
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0
Query:    1 MPLSTALSFVAVGACWGCTTPFIKDGTS----SKLEPDTQQQPTTNENN----RLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQ 137
            M + TA+ F+ VGA WGCTTPF++ GT     +K +P T+ +P  NE       + KLF PL  L   +AA+ + LNQ GS L+YYLLSSQD+S AVP+CN+L+LVFTA T   LG  V    ++  GI L + G+ +CV S  +
Sbjct:    1 MEMQTAVFFILVGAMWGCTTPFMRTGTEETEKNKDDPATETRPVQNERKVAAGGIAKLFEPLLRLLRPQAALAYGLNQGGSLLYYYLLSSQDISLAVPICNSLTLVFTALTEWVLGTAVRDTWKSALGISLVIFGVTICVLSNQK 145          
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: A0A225WLS3_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLS3_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.620e-29
Identity = 62/136 (45.59%), Postives = 87/136 (63.97%), Query Frame = 0
Query:    3 LSTALSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGKLFGPLRSLA-SVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQ 137
            +ST LSF+ VGA WGCT P IK G++  +         T ++N +G+    L  L  + +  +PF LNQSGS ++ YLL S D+S AVP+CN+L+ VFTA T+  LGEK  RP+ T +G+ L L+G+A+C  SK Q
Sbjct:    5 ISTLLSFLFVGALWGCTNPLIKRGSNDSVM-------YTRKSNSVGEFGKQLIGLVKNWQFVLPFALNQSGSVVYVYLLGSADISNAVPICNSLTFVFTAITSRLLGEKPQRPVSTYTGMFLILLGVAICFDSKQQ 133          
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: A0A448Z7G1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7G1_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.030e-28
Identity = 56/134 (41.79%), Postives = 89/134 (66.42%), Query Frame = 0
Query:    7 LSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGK-----LFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASK 135
            LS + VGA WGCT P ++ G+S   E  + ++P  +++          L   LRS A+V   +P++LNQSGS +FY LL++ D+S AVP+CNA++L+F+  T+  LGE + +PLRT +G  L ++G+A+CV+S+
Sbjct:    9 LSMLLVGALWGCTNPLLRKGSSDAEESSSAKRPDASDDGSXXDSSSSFLVSSLRSFANVGVWLPYVLNQSGSIVFYVLLANSDISMAVPICNAMALLFSFLTSSLLGEPIQKPLRTGAGAFLIMVGVAICVSSQ 142          
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: A0A3R7KFJ3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KFJ3_9STRA)

HSP 1 Score: 108 bits (271), Expect = 9.640e-28
Identity = 60/135 (44.44%), Postives = 84/135 (62.22%), Query Frame = 0
Query:    4 STALSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQL 138
            ST LSF+ VGA WGCT P IK G  S    D        +N+    +   +  + + +  +PF+LNQSGS ++ YLL S D+S AVP+CN+L+ VFTA T+  LGEK  RP+ T +G+VL L+G+A+C  SK  +
Sbjct:    6 STLLSFLFVGALWGCTNPLIKRGKRS----DDDAMYARKDNSVQEFVKQVVHLVKNWQFVLPFILNQSGSVVYVYLLGSADISNAVPICNSLTFVFTAITSRLLGEKPQRPISTYTGMVLILLGVAICFNSKQDM 136          
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: A0A8K1C6X8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6X8_PYTOL)

HSP 1 Score: 107 bits (268), Expect = 2.450e-27
Identity = 62/132 (46.97%), Postives = 84/132 (63.64%), Query Frame = 0
Query:    4 STALSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASK 135
            ST LSF+ VGA WGCT P IK G+   +   T++  +  E  R G     +  + + +  +PFLLNQSGS  + YLL S D+S AVP+CN+L+ VFTA T+  LGEK  RPL T +G+VL L+G+ +C  SK
Sbjct:    7 STLLSFLFVGALWGCTNPLIKTGSGDDVMY-TRRDNSAAEFARQG-----VHLVKNWRFVVPFLLNQSGSVAYVYLLGSTDISNAVPICNSLTFVFTAMTSRLLGEKPRRPLSTYTGMVLILLGVLLCYQSK 132          
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: D0MUD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MUD0_PHYIT)

HSP 1 Score: 107 bits (266), Expect = 4.910e-27
Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = 0
Query:    5 TALSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGKLFGPLRSLA-SVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQL 138
            T LSF+ VGA WGCT P IK G++  +         T ++N +G+       +  + +  +PF LNQSGS ++ YLL S D+S AVP+CN+L+ VFTA T+  LGEK  RP  T +G+VL L+G+A+C  SK  +
Sbjct:    7 TLLSFLFVGALWGCTNPLIKRGSNDDVM-------YTRKDNSIGEFTKQAVGIVKNWQFVLPFALNQSGSVVYVYLLGSADISNAVPICNSLTFVFTAITSRLLGEKPQRPASTYTGMVLILLGVAICFNSKQDM 134          
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: A0A7S2HGD9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGD9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 8.390e-27
Identity = 55/143 (38.46%), Postives = 86/143 (60.14%), Query Frame = 0
Query:    7 LSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTN-----------ENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQL 138
            +SFV VGA WGCT PF++ G++   +P+TQQ                + N    +   L  L  V   +P+LLNQ GS L+Y+LL++ D++ +VP+ NAL+L+F+A T+  LGE++D+PLR   G    L+G+ +C+ S  +L
Sbjct:   10 MSFVLVGAVWGCTNPFLRKGSADDDDPNTQQSNAEGCREDDQIKQKMKGNEQQSIINSLLRLTRVGVFLPYLLNQCGSLLYYHLLANSDLTLSVPISNALALLFSALTSFFLGERLDKPLRATLGATFVLVGVGICLLSSERL 152          
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: A0A7S4AM60_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AM60_9STRA)

HSP 1 Score: 107 bits (268), Expect = 8.840e-27
Identity = 54/131 (41.22%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    7 LSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQ 137
            LS + VGA WGCT P ++ G S+++E       +++ + +   L   L+S  +VK  +P++LNQSGS +FY LL++ D+S AVP+CNA +L+F+  T+  LGE + +P RT +G  L ++G+A+CV+S+ Q
Sbjct:   39 LSMLVVGALWGCTNPLLRKG-SAEVE-------SSSSSKKKNILASALKSFLNVKVWLPYVLNQSGSVVFYVLLANSDISMAVPICNATALLFSFVTSSLLGEPIQKPFRTAAGAFLIMVGVAICVSSQEQ 161          
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Match: A0A2D4C7R2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7R2_PYTIN)

HSP 1 Score: 106 bits (264), Expect = 1.200e-26
Identity = 61/137 (44.53%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    1 MPLSTALSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGK-LFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKA 136
            M  +T LSF+ V A WGCT P IK GTS            T  +N + + L   L  + + +  +PFLLNQSGS  F +LL+S ++S+AVP+CN+L+ VFTA T+  LGE   RPL T +G+ L L G+ VC  +KA
Sbjct:    1 MATTTLLSFLLVSALWGCTNPLIKRGTSQSPAGSRADAVYTRRDNSVKEWLAQALHWIRNWQFVVPFLLNQSGSVAFVHLLASAEISSAVPICNSLTFVFTAITSRVLGEVPRRPLWTYTGVALILAGVFVCFQAKA 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X6_ECTSI2.510e-92100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V8D6_9STRA1.700e-3246.21Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A225WLS3_9STRA5.620e-2945.59Putative membrane protein n=1 Tax=Phytophthora meg... [more]
A0A448Z7G1_9STRA1.030e-2841.79Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A3R7KFJ3_9STRA9.640e-2844.44Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A8K1C6X8_PYTOL2.450e-2746.97Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0MUD0_PHYIT4.910e-2743.70Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A7S2HGD9_9STRA8.390e-2738.46Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4AM60_9STRA8.840e-2741.22Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A2D4C7R2_PYTIN1.200e-2644.53Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018908Putative transmembrane family 234PFAMPF10639TMEM234coord: 9..132
e-value: 7.0E-28
score: 97.0
IPR018908Putative transmembrane family 234PANTHERPTHR28668FAMILY NOT NAMEDcoord: 4..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..142
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.555
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 63..134
NoneNo IPR availableTMHMMTMhelixcoord: 120..142
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig94contigEcto-sp6_S_contig94:572024..573210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig94.18546.1mRNA_Ecto-sp6_S_contig94.18546.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig94 571662..583578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig94.18546.1 ID=prot_Ecto-sp6_S_contig94.18546.1|Name=mRNA_Ecto-sp6_S_contig94.18546.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=144bp
MPLSTALSFVAVGACWGCTTPFIKDGTSSKLEPDTQQQPTTNENNRLGKL
FGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFT
AATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKAQLLTLVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018908TMEM234