prot_Ecto-sp6_S_contig94.18533.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig94.18533.1
Unique Name	prot_Ecto-sp6_S_contig94.18533.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	575

Homology

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BLAST of mRNA_Ecto-sp6_S_contig94.18533.1 vs. uniprot
Match: D7G2W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W5_ECTSI)

HSP 1 Score: 880 bits (2274), Expect = 0.000e+0
Identity = 536/576 (93.06%), Postives = 542/576 (94.10%), Query Frame = 0

Query:    1 MEAT-VEQQREARRQKVLARSQGGHRAPVVDLATEQKEIAPRGVTADLDDDVGAVLDDHPLPAPEDEGKSASRLAAERRRQRILSRSTERMAKVQGDRVIRSGDAAEGEESLDDMLEAAEVEFFGGKEEGTTGVAEVKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSRQRLGDAEGAGLKVAARSDGXXXXXXXXXXXXXXXASSRRPTGNKALEKQGFDLAAIQSLSRAAGTDNSGVGGAATPGRKRLLGGVRFWTGLEGVTKTALLLLLGAGVGGLLLPEARAAVAQAKFEAEHMQGFADSRSRLELFLAGDGGSEGRNAFDVGFDAGSTAADEFGDVXXXXXXXXXXXXXXXXXXXXXXXXEDAKVDVVAEGRGDEAVLAATMGEEEGGDVGHDGMLSEATDWFLNFVDLVVGWAHYLSAVSMPWGGGVGEISCVSAIYLAMFVRLVVAVAFSGVRVVLGLPAFPAANPTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGSKEGDYSGGGG-LKEL 574
            MEAT VEQQREARRQKVLARSQGGHRAPVVDLATEQKEIAPRGVTADLDDDVGAVLDDHPLPAPEDEGKSASRLAAERRRQRILSRSTERMAKVQGDRVIRSGDAA+GEESLDDMLEAAEVEFFGGKE+GTTGVAEVKPAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSRQRLGDAEGAGLK AARSDG XXXXXXXXXXXXXX SSRRPTGNKALEKQGFDLAAIQSLSRAAGTDNSGVGGAATPGRKRLLGGVRFWTGLEGVTKTALLLLLGAGVGGLLLPEARAAVAQAKFEAEHMQGFADSRSRLELFLAGDGGSEGRNA D GFDAGSTAADEFGDV                        EDAKVD VAEGRGDEAVLAATMGEEEGGDVGHDGMLSEATDWFLNFVD+VVGWAHYLSAVSMPWGGGVGEISCVSAIYLA+FVRLVVAVAFSGVRV+LGLPAFPAANPTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGS+EGDYSGGGG LKEL
Sbjct:    1 MEATAVEQQREARRQKVLARSQGGHRAPVVDLATEQKEIAPRGVTADLDDDVGAVLDDHPLPAPEDEGKSASRLAAERRRQRILSRSTERMAKVQGDRVIRSGDAAQGEESLDDMLEAAEVEFFGGKEKGTTGVAEVKPAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSRQRLGDAEGAGLKHAARSDGGXXXXXXXXXXXXXXXSSRRPTGNKALEKQGFDLAAIQSLSRAAGTDNSGVGGAATPGRKRLLGGVRFWTGLEGVTKTALLLLLGAGVGGLLLPEARAAVAQAKFEAEHMQGFADSRSRLELFLAGDGGSEGRNALDEGFDAGSTAADEFGDVGDAYSSSSGSFESAENTEDSE---EDAKVDGVAEGRGDEAVLAATMGEEEGGDVGHDGMLSEATDWFLNFVDMVVGWAHYLSAVSMPWGGGVGEISCVSAIYLAIFVRLVVAVAFSGVRVMLGLPAFPAANPTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGSEEGDYSGGGGDLKEL 573

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BLAST of mRNA_Ecto-sp6_S_contig94.18533.1 vs. uniprot
Match: A0A6H5JKL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL1_9PHAE)

HSP 1 Score: 529 bits (1363), Expect = 1.070e-183
Identity = 317/343 (92.42%), Postives = 323/343 (94.17%), Query Frame = 0

Query:  236 LSRAAGTDNSGVGGAATPGRKRLLGGVRFWTGLEGVTKTALLLLLGAGVGGLLLPEARAAVAQAKFEAEHMQGFADSRSRLELFLAGDGGSEGRNAFDVGFDAGSTAADEFGDVXXXXXXXXXXXXXXXXXXXXXXXXE-DAKVDVVAEGRGDEAVLAATMGEEEGGDVGHDGMLSEATDWFLNFVDLVVGWAHYLSAVSMPWGGGVGEISCVSAIYLAMFVRLVVAVAFSGVRVVLGLPAFPAANPTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGSKEGDYS---GGGGLKEL 574
            +SRAAGT NSGVGGAATPGRKRLLGGVRFWTGLEGVTKTALLLLLGAGVGGLLLPEARAAVAQAKFEA+HMQGFADSRSRLE FLAGDG SEGR A DVGFDAGSTAADEFGDV  XXXXXXXXXXXXXXXXXXXXXXE DAKVD VAE RGDEAVLAATMGEEE GD   DG+LSEATDWFLNFVDLVVGWAHYLSAVSMPW GGVGEISCVSAI+LA+FVRLVVAVAFSGVRVVLGLPAFPAA  TSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGS+EGDYS   GGGGLKEL
Sbjct:    1 MSRAAGTGNSGVGGAATPGRKRLLGGVRFWTGLEGVTKTALLLLLGAGVGGLLLPEARAAVAQAKFEADHMQGFADSRSRLEFFLAGDGVSEGRKALDVGFDAGSTAADEFGDVVDXXXXXXXXXXXXXXXXXXXXXXEEDAKVDDVAERRGDEAVLAATMGEEEAGD---DGLLSEATDWFLNFVDLVVGWAHYLSAVSMPWRGGVGEISCVSAIHLALFVRLVVAVAFSGVRVVLGLPAFPAAQSTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGSEEGDYSTGGGGGGLKEL 340

[Close]

BLAST of mRNA_Ecto-sp6_S_contig94.18533.1 vs. uniprot
Match: A0A6H5JKC7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC7_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.090e-74
Identity = 135/141 (95.74%), Postives = 138/141 (97.87%), Query Frame = 0

Query:    1 MEAT-VEQQREARRQKVLARSQGGHRAPVVDLATEQKEIAPRGVTADLDDDVGAVLDDHPLPAPEDEGKSASRLAAERRRQRILSRSTERMAKVQGDRVIRSGDAAEGEESLDDMLEAAEVEFFGGKEEGTTGVAEVKPAA 140
            MEAT VEQQREARRQKVLARSQGGHRAPVVDLATEQKEIAPRGVTADLDD+VGAV+DDHPLPAPED GKSASRLAAERRRQRILSRSTERMAKVQGDRVIRSGDAAEGEESLDDML+AAEVEFFG KEEGTTGVAEVKPAA
Sbjct:    1 MEATAVEQQREARRQKVLARSQGGHRAPVVDLATEQKEIAPRGVTADLDDEVGAVVDDHPLPAPEDAGKSASRLAAERRRQRILSRSTERMAKVQGDRVIRSGDAAEGEESLDDMLQAAEVEFFGEKEEGTTGVAEVKPAA 141

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig94.18533.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig94.18533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G2W5_ECTSI	0.000e+0	93.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JKL1_9PHAE	1.070e-183	92.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JKC7_9PHAE	1.090e-74	95.74	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 450..476
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 534..574
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 512..533
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 488..506
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 507..511
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 477..487
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..449
None	No IPR available	TMHMM	TMhelix		coord: 487..509
None	No IPR available	TMHMM	TMhelix		coord: 450..472
None	No IPR available	TMHMM	TMhelix		coord: 415..437

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig94	contig	Ecto-sp6_S_contig94:418826..425151 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig94.18533.1	mRNA_Ecto-sp6_S_contig94.18533.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig94 417980..425522 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig94.18533.1 ID=prot_Ecto-sp6_S_contig94.18533.1|Name=mRNA_Ecto-sp6_S_contig94.18533.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=575bp
MEATVEQQREARRQKVLARSQGGHRAPVVDLATEQKEIAPRGVTADLDDD
VGAVLDDHPLPAPEDEGKSASRLAAERRRQRILSRSTERMAKVQGDRVIR
SGDAAEGEESLDDMLEAAEVEFFGGKEEGTTGVAEVKPAAARRQAYFKSG
GGGGGPSRDEGGGGVGAAAAQRKPSSRQRLGDAEGAGLKVAARSDGGASR
QSPPSAGGGGRASSRRPTGNKALEKQGFDLAAIQSLSRAAGTDNSGVGGA
ATPGRKRLLGGVRFWTGLEGVTKTALLLLLGAGVGGLLLPEARAAVAQAK
FEAEHMQGFADSRSRLELFLAGDGGSEGRNAFDVGFDAGSTAADEFGDVG
DVVDADSSSSGSFESAENTEDSEEDAKVDVVAEGRGDEAVLAATMGEEEG
GDVGHDGMLSEATDWFLNFVDLVVGWAHYLSAVSMPWGGGVGEISCVSAI
YLAMFVRLVVAVAFSGVRVVLGLPAFPAANPTSKPGMVMGMVLATVPTLG
KVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGAL
GLFSPSFQGSKEGDYSGGGGLKEL*