prot_Ecto-sp6_S_contig94.18510.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig94.18510.1
Unique Name	prot_Ecto-sp6_S_contig94.18510.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	114

Homology

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: D7FWX1_ECTSI (RNA-binding protein SiahBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWX1_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 6.210e-71
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0

Query:    1 MQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS 113
            MQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFS+PNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS
Sbjct:  584 MQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS 696

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: UPI000440C6E5 (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440C6E5)

HSP 1 Score: 77.8 bits (190), Expect = 2.220e-14
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 0

Query:   16 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHK-QRGSDGAVWAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLD 112
            SR + L+NM+GPEDADD+D   EI EE    GTV ++ VH  Q        AVR+FV+F  P      +R++ GR+F GR V+A  +    F QGLL+
Sbjct:  562 SRVVLLLNMVGPEDADDDDLPGEIGEECSKNGTVERVIVHLVQPPPQNPEDAVRIFVLFKGPAGAWKTVRELDGRYFGGRTVRARYFPERAFGQGLLN 659

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: W4K7G3_HETIT (Uncharacterized protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4K7G3_HETIT)

HSP 1 Score: 72.8 bits (177), Expect = 1.280e-13
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 0

Query:   16 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHK-QRGSDGAVWAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLD 112
            SR + L NM+G EDA D+D +AEI +E    GTV ++ VH  Q     A  AVR+FVVF+ P      +R++ GRFF GR V+A  +   +F Q  LD
Sbjct:   81 SRVIVLQNMVGIEDAADDDLRAEIGDECSKNGTVERVVVHVVQPPPPSAEDAVRIFVVFAGPAGAWKTVRELDGRFFGGRSVRARYFSERLFGQFDLD 178

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: A0A8H5GIE8_9AGAR (Uncharacterized protein n=1 Tax=Tetrapyrgos nigripes TaxID=182062 RepID=A0A8H5GIE8_9AGAR)

HSP 1 Score: 74.7 bits (182), Expect = 2.640e-13
Identity = 40/98 (40.82%), Postives = 55/98 (56.12%), Query Frame = 0

Query:   16 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS 113
            S  + L NM+GPEDA+DED + EI +E    G V ++ VH  R       AVR+FV FS P      +R++ GRFF GR V+A  ++   F  G  D+
Sbjct:  501 SPVVLLTNMVGPEDAEDEDLREEIGDECSKNGVVERVVVHLLREVSDTADAVRIFVKFSGPAGAWKTVRELDGRFFGGRTVRARYFNERAFESGNWDA 598

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: K5WAE1_PHACS (Uncharacterized protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5WAE1_PHACS)

HSP 1 Score: 73.9 bits (180), Expect = 4.990e-13
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 0

Query:   16 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAV-WAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLD 112
            SR + L NM+GP+DADDED + EI +E    GTV ++ VH           AVR+FV+F+ P      +R++ GR+F GR V+A  +   +F Q  LD
Sbjct:  580 SRVVVLTNMVGPDDADDEDLREEIGDECSKNGTVERVIVHLVNPPPPTEDLAVRIFVLFAGPVGAWKTVRELDGRYFGGRTVRARYFSENLFQQYALD 677

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: UPI0004407497 (uncharacterized protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004407497)

HSP 1 Score: 72.4 bits (176), Expect = 1.690e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 0

Query:   16 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHK-QRGSDGAVWAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS 113
            SR + L NM+GPEDA+D++ + EI +E    GTV ++ VH  +   +    AVR+FV F+ P      +R++ GR+FAGR VQA  +    F Q  L++
Sbjct:  448 SRVVVLTNMVGPEDAEDDELREEIGDECSKNGTVNRVLVHLVEPPPENEEDAVRIFVAFNGPAAAWKTVRELDGRYFAGRMVQARYFPESQFKQFDLNA 546

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: UPI0004417D7E (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004417D7E)

HSP 1 Score: 72.4 bits (176), Expect = 1.740e-12
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 0

Query:   16 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHK-QRGSDGAVWAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS 113
            SR + L NM+GPEDADDED + EI +E    GTV ++ VH      +    AVR+FVVF+ P      +R++ GR+F GR V+A  +    F+    D+
Sbjct:  606 SRVVVLTNMVGPEDADDEDLRGEIGDECSKNGTVERVVVHLLSPPPENPEEAVRIFVVFAGPAGAWKTVRELDGRYFGGRTVRARYFPEKHFNTAWWDA 704

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: A0A067M593_9AGAM (Uncharacterized protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067M593_9AGAM)

HSP 1 Score: 72.0 bits (175), Expect = 2.040e-12
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 0

Query:   16 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHK-QRGSDGAVWAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLD 112
            SR + L NM+G EDADD++ + EI EE    G V ++ VH  Q        AVR+FV FS P      +R++ GR+F GR V+A  +D G F  G LD
Sbjct:  298 SRVVVLTNMVGVEDADDDELRDEIGEECAKHGVVDRVVVHLLQPPPFDEADAVRIFVQFSGPVGAWKTVRELDGRYFGGRTVRARYFDEGAFVTGSLD 395

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: A0A4Y7QL36_9AGAM (G-patch domain-containing protein (Fragment) n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7QL36_9AGAM)

HSP 1 Score: 72.0 bits (175), Expect = 2.300e-12
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 0

Query:   16 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVW-AVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLD 112
            S+ + L NM+GPEDADDED + EI +E    G V ++ VH        +   VR+FV+FS P      +R++ GR+F GR V+A  Y    F++  LD
Sbjct:  446 SKVVVLTNMVGPEDADDEDLRGEIGDECSKNGVVERVFVHVIHPPPSKIEDMVRIFVLFSGPVGAWKTVRELDGRYFGGRSVRARYYPEAEFARFNLD 543

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BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Match: A0A4S4L4Q3_9AGAM (Uncharacterized protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L4Q3_9AGAM)

HSP 1 Score: 70.9 bits (172), Expect = 5.950e-12
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 0

Query:   16 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLD 112
            SR + L NM+GPEDA+DED + EI +E    G V ++ VH          AVR+FV F  P      +R++ GR+F GR V+A  +    F +  LD
Sbjct:  534 SRVVVLTNMVGPEDAEDEDLREEIGDECAKNGIVERVIVHVVNAPQEDSDAVRIFVKFGGPAAAWKTVRELDGRYFGGRTVRARYFSESRFGRFDLD 630

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig94.18510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWX1_ECTSI	6.210e-71	99.12	RNA-binding protein SiahBP n=2 Tax=Ectocarpus TaxI...	[more]
UPI000440C6E5	2.220e-14	43.88	hypothetical protein n=1 Tax=Stereum hirsutum (str...	[more]
W4K7G3_HETIT	1.280e-13	43.88	Uncharacterized protein n=1 Tax=Heterobasidion irr...	[more]
A0A8H5GIE8_9AGAR	2.640e-13	40.82	Uncharacterized protein n=1 Tax=Tetrapyrgos nigrip...	[more]
K5WAE1_PHACS	4.990e-13	40.82	Uncharacterized protein n=1 Tax=Phanerochaete carn...	[more]
UPI0004407497	1.690e-12	39.39	uncharacterized protein n=1 Tax=Fomitiporia medite...	[more]
UPI0004417D7E	1.740e-12	40.40	hypothetical protein n=1 Tax=Punctularia strigosoz...	[more]
A0A067M593_9AGAM	2.040e-12	42.86	Uncharacterized protein n=1 Tax=Botryobasidium bot...	[more]
A0A4Y7QL36_9AGAM	2.300e-12	39.80	G-patch domain-containing protein (Fragment) n=1 T...	[more]
A0A4S4L4Q3_9AGAM	5.950e-12	39.18	Uncharacterized protein n=1 Tax=Phellinidium pouza...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 19..99 e-value: 1.6E-6 score: 37.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 16..102 e-value: 2.5E-21 score: 77.5
IPR040052	Splicing factor 45	PANTHER	PTHR13288	SPLICING FACTOR 45 SPF45	coord: 16..112
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 30..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig94	contig	Ecto-sp6_S_contig94:156937..161481 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig94.18510.1	mRNA_Ecto-sp6_S_contig94.18510.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig94 84641..161546 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig94.18510.1 ID=prot_Ecto-sp6_S_contig94.18510.1|Name=mRNA_Ecto-sp6_S_contig94.18510.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=114bp
MQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVL
QLHVHKQRGSDGAVWAVRVFVVFSEPNETVTAIRKMHGRFFAGRQVQAAA
YDHGMFSQGLLDS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003954	RRM_dom_euk
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR040052	RBM17
IPR035979	RBD_domain_sf