prot_Ecto-sp6_S_contig92.18388.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig92.18388.1
Unique Nameprot_Ecto-sp6_S_contig92.18388.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length391
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18388.1 vs. uniprot
Match: D8LPN2_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPN2_ECTSI)

HSP 1 Score: 640 bits (1650), Expect = 1.560e-229
Identity = 384/390 (98.46%), Postives = 388/390 (99.49%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGEANAASGTPASRRRRGQDKRQSQDRDEEALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQPQSTACVSKVAARTVRLGREVTGQEAEEAIKRDQGRKGQADPMGSLFRSGAQPMRGSLPLERRGTSYQPEAATANLHGAAGLCVDEATSHSNRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTRNNRDKFARRHSDSAAGLSGGRADEATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAGQSLPDERTRAYNNQYNAPAARQNRTR 390
            MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGEANAASGTPASRRRRGQDKR+SQDRDEEALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQPQSTACVSKVAARTVRLGREVTGQEAEEAIKRDQGRKGQADPMGSLFRSGAQPMRGSLPLERRGTSYQPEAATANL GAAGLCVDEATSHSNRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTR++RD+FARRHSDSAAGLSGGRADEATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAGQSLPDERTRAYNNQYNAPAARQNR R
Sbjct:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGEANAASGTPASRRRRGQDKRRSQDRDEEALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQPQSTACVSKVAARTVRLGREVTGQEAEEAIKRDQGRKGQADPMGSLFRSGAQPMRGSLPLERRGTSYQPEAATANLPGAAGLCVDEATSHSNRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTRSDRDRFARRHSDSAAGLSGGRADEATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAGQSLPDERTRAYNNQYNAPAARQNRIR 390          
BLAST of mRNA_Ecto-sp6_S_contig92.18388.1 vs. uniprot
Match: A0A836CIP7_9STRA (Cir_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP7_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.100e-32
Identity = 99/220 (45.00%), Postives = 128/220 (58.18%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGEANAASGTPASRRRRGQDKRQSQDRDEEALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQPQSTACVSKVAARTVRLGREVTGQEAEEAIKRDQGRKGQADPMGSLFR 220
            MSGRLIILPKKSWH  +R+N+E+V RDERLAAE    A E+A+   QE  VETL +KR   E    + +A  G    R+ +    R+  D    A GG  QGWG   QHVNLF + E  +G     N +H REK++QEL RQ+R G AP ALG  +A   + +  PWY++    + A  S  AA  V  GRE+ G+ A+ A+ RD  RK   DPM +L R
Sbjct:    1 MSGRLIILPKKSWHVWRRDNLERVKRDERLAAEAQEEADEKAQRADQEIRVETLKRKR---EQQHQQPSAKVGDGRGRKSQKSTARKGGD----AGGGVDQGWGTGAQHVNLFPEPEARSGG----NVEHLREKEQQELLRQRREGAAPVALGGDAA--GELQLAPWYSKPASAAAAQASTAAATVVVRGRELEGEAAKRALGRDDRRKALLDPMAALIR 207          
BLAST of mRNA_Ecto-sp6_S_contig92.18388.1 vs. uniprot
Match: A0A2R5LJQ0_9ACAR (Putative leukocyte receptor cluster member 1 (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LJQ0_9ACAR)

HSP 1 Score: 67.0 bits (162), Expect = 8.190e-9
Identity = 53/164 (32.32%), Postives = 81/164 (49.39%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGEANAASGTPASRRRRGQDKRQSQDRDEEALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQ 170
            ILPKKSWH   + NIE+V RDE LAAEE    + R +    E  +  L ++       +G +        S  +  +D+R+ ++                  HVN F D E     + G+N+DH+REKKE++   +++ GL  T LG+GS+E     S  WY++
Sbjct:    4 ILPKKSWHVRTKRNIERVRRDEALAAEEEKEQQRRVQLAESEARINLLREQAKLRSGGQGHSAVDGAKRESLSQEDEDERKQKE------------------HVNFFDDVESAQRSLHGKNADHEREKKEEQETYEKKIGLL-TYLGQGSSEASGSSS--WYSE 146          
BLAST of mRNA_Ecto-sp6_S_contig92.18388.1 vs. uniprot
Match: A0A293M4V0_ORNER (Cir_N domain-containing protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M4V0_ORNER)

HSP 1 Score: 64.3 bits (155), Expect = 6.540e-8
Identity = 55/164 (33.54%), Postives = 79/164 (48.17%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGEANAASGTPASRRRRGQDKRQSQDRDEEALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQ 170
            ILPKKSWH   + NIE+V RDE LAAEE    + R +    E  +  L ++     +      A    P+           +QD DE+              HVN FS+ E     +  +N+DH+REKKE++ + +++ GL  T LG+GS E     S  WY+Q
Sbjct:    3 ILPKKSWHVRTKRNIERVRRDEALAAEEEKEQQRRIQLAESEARINLLREQAKLRASRHHSVVADVKQPSL---------SNQDADEQKQ----------RDHVNFFSEVEGAQRSLHSKNADHEREKKEEQDEYEKKIGLL-TYLGQGSTEASGSSS--WYSQ 144          
BLAST of mRNA_Ecto-sp6_S_contig92.18388.1 vs. uniprot
Match: A0A4D9D443_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D443_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 8.160e-8
Identity = 64/182 (35.16%), Postives = 91/182 (50.00%), Query Frame = 0
Query:    2 SGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETL-TKKRSASETIEGEANAASGTPASRRRRGQDKR----QSQDRDEEAL----GGKGQGWGATLQ-HVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQP 173
            SGRLIILPKK+WH   ++N E+VLRDERL  EE A   E+ R++ ++  +E L  +KR   E  + + +    T AS    G         S+  D E L       G   GA  Q HV+LF        K  G N D+ RE+  QEL++++  G+AP    +       K ++ WY Q +P
Sbjct:   22 SGRLIILPKKTWHVWNQDNRERVLRDERLHREEEAKQAEKQRDVARQDRLEMLRARKRQRDEGEDADVSHFEATSASEMGGGGVGALALGASRGLDNEGLCIPAAKSGYVEGANHQGHVHLFGQVAEHLAKQAG-NKDYVRERAAQELRKKRAEGVAPWGFDDV------KPARQWYEQGEP 196          
BLAST of mRNA_Ecto-sp6_S_contig92.18388.1 vs. uniprot
Match: UPI0014258B8D (leukocyte receptor cluster member 1 homolog n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258B8D)

HSP 1 Score: 58.5 bits (140), Expect = 8.180e-6
Identity = 61/187 (32.62%), Postives = 89/187 (47.59%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKK--RSASETIEGEANAASGTPASRRRRGQDKRQSQDRDEEALGG-----KGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQPQSTACVSKVAART 186
            ILPKKSWH  K+ENIE+V RDE  AAEE    + R     QE     L +K  ++ +E +                    K+Q Q  D+ AL       KG        H+N F D + E  KI G N+DH+ EK+ +++  +++ GL  T LG+ SAE +  +  PWY + + +      K+   T
Sbjct:    3 ILPKKSWHVLKKENIERVRRDEAKAAEEEKQKQARIALAEQEARTARLRQKARKNYNEAV--------------------KQQGQQGDDLALVAIDDQPKG--------HINFFKDIQ-EGKKIGGVNADHEAEKQAEKINYEKKIGLL-TYLGQSSAEAQTVK--PWYQESKRKLAKANDKLTTET 157          
BLAST of mRNA_Ecto-sp6_S_contig92.18388.1 vs. uniprot
Match: A0A7S3XLM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLM5_HETAK)

HSP 1 Score: 52.4 bits (124), Expect = 7.820e-5
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQE 48
            MSGRLIIL  KSWH   ++NIEKV +DERLAAEE    +E+ R + QE
Sbjct:    1 MSGRLIILRHKSWHVWNQDNIEKVKKDERLAAEEEEKNKEKQRLVDQE 48          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LPN2_ECTSI1.560e-22998.46Cir_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CIP7_9STRA1.100e-3245.00Cir_N domain-containing protein n=1 Tax=Tribonema ... [more]
A0A2R5LJQ0_9ACAR8.190e-932.32Putative leukocyte receptor cluster member 1 (Frag... [more]
A0A293M4V0_ORNER6.540e-833.54Cir_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A4D9D443_9STRA8.160e-835.16Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
UPI0014258B8D8.180e-632.62leukocyte receptor cluster member 1 homolog n=1 Ta... [more]
A0A7S3XLM5_HETAK7.820e-560.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 272..292
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainSMARTSM01083Cir_N_3coord: 12..48
e-value: 1.9E-5
score: 34.1
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainPFAMPF10197Cir_Ncoord: 12..48
e-value: 7.8E-9
score: 35.6
IPR039875Leukocyte receptor cluster member 1-likePANTHERPTHR22093LEUKOCYTE RECEPTOR CLUSTER LRC MEMBER 1coord: 4..388

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:118420..121930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18388.1mRNA_Ecto-sp6_S_contig92.18388.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig92 118115..122445 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig92.18388.1 ID=prot_Ecto-sp6_S_contig92.18388.1|Name=mRNA_Ecto-sp6_S_contig92.18388.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=391bp
MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGI
VETLTKKRSASETIEGEANAASGTPASRRRRGQDKRQSQDRDEEALGGKG
QGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPT
ALGEGSAELKDKESQPWYTQLQPQSTACVSKVAARTVRLGREVTGQEAEE
AIKRDQGRKGQADPMGSLFRSGAQPMRGSLPLERRGTSYQPEAATANLHG
AAGLCVDEATSHSNRGKHAGKAKKVKKDKKGKRDKKKHAKEKRHSTETRT
RNNRDKFARRHSDSAAGLSGGRADEATDAQREQKLKDLRSRRLAREGGER
ERQIRLLAEREMAGQSLPDERTRAYNNQYNAPAARQNRTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019339CIR_N_dom
IPR039875LENG1-like