prot_Ecto-sp6_S_contig92.18381.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig92.18381.1
Unique Nameprot_Ecto-sp6_S_contig92.18381.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length613
Homology
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BLAST of mRNA_Ecto-sp6_S_contig92.18381.1 vs. uniprot
Match: A0A6H5L576_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE)

HSP 1 Score: 936 bits (2419), Expect = 0.000e+0
Identity = 529/655 (80.76%), Postives = 547/655 (83.51%), Query Frame = 0 
Query:    1 MSSAWTKGDRRARKQLEKSLSSDQDDHITRFALVRLLASKADPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGANLTLWRARGETTSGSTGSRAGGGQGKDTRDVVEIRLDVSSERTDLLHRAQHFLEEALMAPENLNDPAIRAQV-------------------------------------------AFCKEASGDCKEALALYASIISDSALSPGASAVIFRTSVLLAYVGRFDECVRYLEFIEGQPPKGCSMLLVQALLYTCFVSLGLEMKASRRLITLREAYNDEYTAGRMGGGFSRDEIPWDRLPGWFYMWRELGVKSLRAGDYYAGIQMFSQATLQREDPETMVCTAEMLWVLGEPKHALALCERAYAADPLHIGAQRRLTGWAPNKWKDRIVKEEERREAITEMRRLADLSDRKADAMLARRRRREKARFLRAWRRLHAKRKHRRRTNAEXXXXXXXXXMRDDTTISRSSGSDEFSQSXXXXXXXXXXXXXXXXXXXXXXXXPARSDRSSSFSSSLSANEQLERSVDEKSSASSAPVPEXXXVPSAAEAAEAGRSNFSACFRAETELAMRRKREADEHHREMPMDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEMHALARFQWHRKTHEAKITKVVYGS 612
            MS AWTKGD RA+KQLEKSLSSDQDDH+TRFALVRLLASKA+PAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGA L LWRARGETTS STGSRAGGGQGKDTR+VVEIRLDVSSERTDLLHRAQHFLEEALM+PENLNDPAIRAQV                                           AFCKEA GD KEAL LYASIISDSALSPGASAVIFRTSVLLAYVGR DECVRYLEFIEGQPPKGCSMLLVQALLYTC+VSLGLE+K SRRLITLREAYNDEYTAGRMG GFSRDEIPWDRLPGWFYMWRELGV+S+RAG+YYAGIQMFSQATLQR+DPETMVCTAEMLWVLGEPK ALALCERAYAADPLHIGAQRRL+GWAP KWK+RIVKEEERREAITEMRRLADLSD+KADAMLARRRRREKARFLRAWRRLH K KHRR T+ E       XX           GSD+FS S           XXXXXXXXXXXXX         F+SSLSA EQ+ERSVDEKSSASSAPVPE   VPSAAEAAEAGRSNFSACFRAETE AMRRKREA EHH EMPMDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEM ALARFQ HRKTHEAKITKVVYGS
Sbjct:    1 MSLAWTKGDWRAKKQLEKSLSSDQDDHVTRFALVRLLASKAEPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKEEERREAITEMRRLADLSDKKADAMLARRRRREKARFLRAWRRLHDKHKHRRSTSTEGEEAQTGXXXXXXXXXXXXXGSDKFSWSDSSSSRSGSSSXXXXXXXXXXXXXXXXXXXXXXFASSLSAKEQVERSVDEKSSASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRRKREATEHHGEMPMDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEMRALARFQCHRKTHEAKITKVVYGS 655
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L576_9PHAE0.000e+080.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..209
e-value: 1.7E-5
score: 26.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 237..428
e-value: 7.1E-6
score: 27.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 270..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:49059..54642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18381.1mRNA_Ecto-sp6_S_contig92.18381.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig92 49059..54642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig92.18381.1 ID=prot_Ecto-sp6_S_contig92.18381.1|Name=mRNA_Ecto-sp6_S_contig92.18381.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=613bp
MSSAWTKGDRRARKQLEKSLSSDQDDHITRFALVRLLASKADPAAAEELL
RGPGVEDRLLADPNTRVAMLSSLGGANLTLWRARGETTSGSTGSRAGGGQ
GKDTRDVVEIRLDVSSERTDLLHRAQHFLEEALMAPENLNDPAIRAQVAF
CKEASGDCKEALALYASIISDSALSPGASAVIFRTSVLLAYVGRFDECVR
YLEFIEGQPPKGCSMLLVQALLYTCFVSLGLEMKASRRLITLREAYNDEY
TAGRMGGGFSRDEIPWDRLPGWFYMWRELGVKSLRAGDYYAGIQMFSQAT
LQREDPETMVCTAEMLWVLGEPKHALALCERAYAADPLHIGAQRRLTGWA
PNKWKDRIVKEEERREAITEMRRLADLSDRKADAMLARRRRREKARFLRA
WRRLHAKRKHRRRTNAEDEEARGGRRMRDDTTISRSSGSDEFSQSDSSSS
RSGSSSSSGSARSSRSGGGPARSDRSSSFSSSLSANEQLERSVDEKSSAS
SAPVPEPFPVPSAAEAAEAGRSNFSACFRAETELAMRRKREADEHHREMP
MDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEMHALARFQWHRKT
HEAKITKVVYGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf