prot_Ecto-sp6_S_contig91.18371.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig91.18371.1
Unique Nameprot_Ecto-sp6_S_contig91.18371.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length90
Homology
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: D7FV06_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV06_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 8.010e-44
Identity = 60/69 (86.96%), Postives = 67/69 (97.10%), Query Frame = 0
Query:    9 EDSWFECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRS 77
            EDS+FECNICL+GV+EPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTA NVIPLYGRG +++DPR+
Sbjct:   11 EDSYFECNICLDGVREPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTASNVIPLYGRGAESVDPRT 79          
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: A0A6H5JXT6_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXT6_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.140e-42
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    8 GEDSWFECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRS 77
            GEDS FECNICL+GV+EPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTA NV+P+YGRG + +DPR+
Sbjct:   17 GEDSCFECNICLDGVREPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTASNVVPIYGRGAEGVDPRT 86          
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: A0A835ZFB6_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB6_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.660e-38
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 0
Query:   10 DSWFECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRS 77
            DS FECNICL+ V EPVVTRCGHLFCWPCLYRWLNTN TECPVCKAGV+  NVIPLYGRG D +DPR+
Sbjct:   12 DSRFECNICLDHVNEPVVTRCGHLFCWPCLYRWLNTNHTECPVCKAGVSCDNVIPLYGRGQDPVDPRT 79          
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: A0A7R9YCR0_9STRA (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCR0_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.970e-35
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = 0
Query:   13 FECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRS 77
            FECNICL+ V++PVVT+CGHL+CWPCLYRWLNTN  +CPVCKAGVT  NVIPLY RG+D++DPR+
Sbjct:   13 FECNICLDVVRDPVVTQCGHLYCWPCLYRWLNTNHYQCPVCKAGVTRENVIPLYVRGSDHVDPRT 77          
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: A0A7S2V596_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V596_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.190e-33
Identity = 51/71 (71.83%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    7 VGEDSWFECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRS 77
            + EDS FECNICL+ V EPVVTRCGHLFCW CLYRWLN N+T+CPVCKAGV+  NVIP+Y RG +  DPR+
Sbjct:   97 IEEDSRFECNICLDLVHEPVVTRCGHLFCWSCLYRWLNVNRTDCPVCKAGVSQDNVIPIYTRGAEEQDPRT 167          
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: A0A6G0XF82_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XF82_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.860e-32
Identity = 49/75 (65.33%), Postives = 61/75 (81.33%), Query Frame = 0
Query:   13 FECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRSPGLVVAEGVP 87
            F+CNICL+ VKEPVVT CGHL+CWPCLYRW+  N  +CPVCKAGVT  N+IP+YGRG+ +IDPR   + + +GVP
Sbjct:   19 FDCNICLDHVKEPVVTLCGHLYCWPCLYRWI-LNHNQCPVCKAGVTQENIIPVYGRGSKSIDPRKQEVPLGDGVP 92          
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: W4HDP2_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDP2_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.960e-32
Identity = 49/75 (65.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:   13 FECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRSPGLVVAEGVP 87
            F+CNICL+ VKEPVVT CGHL+CWPCLYRW+ +N  +CPVCKAGVT  NVIP+YGRG++++DPR   + +  GVP
Sbjct:   23 FDCNICLDHVKEPVVTLCGHLYCWPCLYRWICSNS-QCPVCKAGVTQDNVIPVYGRGSNSVDPRKQSVPLDVGVP 96          
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: W7TVM5_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVM5_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.540e-30
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 0
Query:   10 DSWFECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRS 77
            DS F+CN+CL  V +PVVT CGHL+CWPCLYRWL+TN T CPVCKAGVT  NVIPLYGRG++ +DPR+
Sbjct:   98 DSRFDCNVCLSEVGDPVVTLCGHLYCWPCLYRWLSTNHT-CPVCKAGVTKENVIPLYGRGSEQVDPRT 164          
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: A0A067CVC2_SAPPC (RING-type E3 ubiquitin transferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVC2_SAPPC)

HSP 1 Score: 114 bits (285), Expect = 2.700e-30
Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 0
Query:   13 FECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRS 77
            F+CNICL+ VKEPVVT CGHL+CWPCL++W+  N  ECPVCKAGVT  NVIP+YGRG ++IDPR+
Sbjct:    8 FDCNICLDRVKEPVVTLCGHLYCWPCLFQWI-ANHNECPVCKAGVTKENVIPVYGRGANSIDPRT 71          
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Match: A0A1V9Z912_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z912_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.850e-30
Identity = 47/80 (58.75%), Postives = 64/80 (80.00%), Query Frame = 0
Query:    8 GEDSWFECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTAINVIPLYGRGTDNIDPRSPGLVVAEGVP 87
            G  S F+CNIC++ VKEPVVT CGHL+CWPCL++W+  N  +CPVCKAGVT+ NVIP+YGRG +++DPR+  +   +G+P
Sbjct:    3 GAASDFDCNICIDRVKEPVVTLCGHLYCWPCLFQWI-ANHNDCPVCKAGVTSENVIPVYGRGANSVDPRT--VKGTDGIP 79          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig91.18371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV06_ECTSI8.010e-4486.96RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A6H5JXT6_9PHAE1.140e-4284.29RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A835ZFB6_9STRA2.660e-3882.35RING-type E3 ubiquitin transferase n=1 Tax=Tribone... [more]
A0A7R9YCR0_9STRA5.970e-3575.38RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A7S2V596_9STRA7.190e-3371.83RING-type E3 ubiquitin transferase n=1 Tax=Fibroca... [more]
A0A6G0XF82_9STRA1.860e-3265.33RING-type E3 ubiquitin transferase n=1 Tax=Aphanom... [more]
W4HDP2_9STRA1.960e-3265.33RING-type E3 ubiquitin transferase n=2 Tax=Aphanom... [more]
W7TVM5_9STRA1.540e-3072.06RING-type E3 ubiquitin transferase n=1 Tax=Nannoch... [more]
A0A067CVC2_SAPPC2.700e-3070.77RING-type E3 ubiquitin transferase n=2 Tax=Saprole... [more]
A0A1V9Z912_9STRA2.850e-3058.75RING-type E3 ubiquitin transferase n=1 Tax=Achlya ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 15..53
e-value: 6.1E-10
score: 49.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 15..54
score: 13.67
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 6..67
e-value: 2.7E-20
score: 73.5
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 14..53
e-value: 7.3E-12
score: 44.9
NoneNo IPR availablePANTHERPTHR12313RNF5coord: 10..78
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 10..60
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 30..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig91contigEcto-sp6_S_contig91:400017..422115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig91.18371.1mRNA_Ecto-sp6_S_contig91.18371.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig91 399923..422149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig91.18371.1 ID=prot_Ecto-sp6_S_contig91.18371.1|Name=mRNA_Ecto-sp6_S_contig91.18371.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=90bp
MEGPTVVGEDSWFECNICLEGVKEPVVTRCGHLFCWPCLYRWLNTNQTEC
PVCKAGVTAINVIPLYGRGTDNIDPRSPGLVVAEGVPVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS