prot_Ecto-sp6_S_contig9.18295.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18295.1
Unique Nameprot_Ecto-sp6_S_contig9.18295.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: D7FVA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA2_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 1.890e-74
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0
Query:    1 EFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLFYNPQE 110
            EFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGD+FDLRKYDEAVSLMTGKFSYLFYNPQE
Sbjct:    3 EFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDMFDLRKYDEAVSLMTGKFSYLFYNPQE 112          
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: A0A024UW39_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UW39_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.280e-24
Identity = 50/101 (49.50%), Postives = 70/101 (69.31%), Query Frame = 0
Query:    5 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLF 105
            PRVN A+L+QF+G+TV +VG + S+    S+A L+TSD   +TV    G+ ++S+YVEVIG +     L+EFK T FGD FDL+ YD+ V L+ GK+S LF
Sbjct:    8 PRVNKAILAQFVGHTVSLVGSIESWT--GSQAVLKTSDNGFVTVHPQPGADYSSKYVEVIGSVQPDGSLKEFKCTSFGDDFDLKNYDKLVQLIHGKYSTLF 106          
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: A0A485KWY3_9STRA (Aste57867_12966 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWY3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.520e-23
Identity = 49/101 (48.51%), Postives = 70/101 (69.31%), Query Frame = 0
Query:    5 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLF 105
            PRVN AV++Q++G TV +VG + S+    S A ++TSDGA +TV    G+ +TS++VEVIG +     LQE+K T FGD FDL+ YD+ V L+ GKF+ +F
Sbjct:    8 PRVNKAVMAQYIGRTVALVGSLESWT--GSMAVIKTSDGALVTVHPQPGADYTSKFVEVIGLVKPDGSLQEYKCTSFGDDFDLKNYDKLVHLIHGKFATMF 106          
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: A0A6G0XXL0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXL0_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.990e-22
Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 0
Query:    5 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLF 105
            PRVN A+++QF+G TV +VG + S+    S A ++TSDG  +TV    G+ ++S++VEVIG +     L+E+K T FGD FDL+ YD+ V L+ GKFS LF
Sbjct:    8 PRVNKAIMAQFVGRTVALVGSLESWT--GSMAVVKTSDGGLVTVHPQPGADYSSKFVEVIGLVQPDGSLKEYKCTSFGDDFDLKNYDKLVHLIHGKFSSLF 106          
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: A0A8K1C3J4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3J4_PYTOL)

HSP 1 Score: 86.3 bits (212), Expect = 1.190e-19
Identity = 45/101 (44.55%), Postives = 62/101 (61.39%), Query Frame = 0
Query:    5 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLF 105
            PRVN   +  F+G TV +VG V S+    +   L TSDG  + V    GS ++S++VEVIG + + + LQEFK+T FGD FDL  YD+ V +   KF +LF
Sbjct:   12 PRVNKKTMGSFVGRTVAIVGAVESHMP--TAVVLRTSDGGMVNVNPMPGSDYSSKFVEVIGRVVDNNTLQEFKTTLFGDNFDLETYDQFVQVAQSKFRHLF 110          
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: A0A484EA13_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA13_BRELC)

HSP 1 Score: 82.0 bits (201), Expect = 5.340e-18
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    4 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLF 105
            +PRVN   +  ++G+TV VVG V  +    +   L TSDG  + V    GS + S+ VEVIG + + + LQEFK+T FGD FDL  YD+ V L   K+ YLF
Sbjct:   10 SPRVNKTTMGGYVGHTVAVVGTVEKHSP--TAVVLRTSDGGIVNVTPQPGSDYGSKVVEVIGRVVDSETLQEFKTTLFGDNFDLDVYDQFVQLSHSKYKYLF 109          
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: H3H303_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H303_PHYRM)

HSP 1 Score: 80.1 bits (196), Expect = 3.300e-17
Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    4 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLF 105
            +PRVN   +  ++G+TV +VG V S+    +  +L TSDG  + V    G+ + S+ VEVIG + + + +QEFK+T FGD FDL  YD+ V L   K+ +LF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHTP--TAVKLRTSDGGIVNVTPQPGTDYGSKVVEVIGRVTDSESIQEFKTTLFGDNFDLDVYDQFVQLAQSKYKHLF 112          
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: A0A0P1B2V0_PLAHL (Metal-dependent amidohydrolase 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2V0_PLAHL)

HSP 1 Score: 85.5 bits (210), Expect = 3.960e-17
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    4 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLF 105
            +PRVN   +S+++G TV +VG V S++   +   L TSDG  + V    GS + S++VEVIG + + + +QEFK+T FGD FDL  YD  V L T K+ +LF
Sbjct:  548 SPRVNKKTMSEYIGTTVALVGAVESHRP--TAVVLRTSDGGIVNVTPQPGSDYGSRFVEVIGRVIDSETIQEFKTTLFGDNFDLDVYDNFVQLSTTKYKHLF 647          
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: A0A225WD33_9STRA (Uncharacterized protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A225WD33_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.330e-16
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    4 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLF 105
            +PRVN   +  ++G+TV +VG V S+    +   L TSDG  + V    GS + S+ VEVIG + + + +QEFK+T FGD FDL  YD+ V L   K+  LF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHSP--TAVVLRTSDGEIVNVTPQPGSDYGSKVVEVIGRVVDTETIQEFKTTLFGDNFDLDVYDQFVQLSQSKYKQLF 112          
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Match: D0N6F0_PHYIT (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0N6F0_PHYIT)

HSP 1 Score: 78.6 bits (192), Expect = 1.330e-16
Identity = 41/102 (40.20%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    4 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGKFSYLF 105
            +PRVN   +  ++G+TV +VG V S+    +   L TSDG  + V+   G+ + S+ VEVIG + + + ++EFK+T FGD FDL  YD+ V L   K+ +LF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHSP--TAVVLRTSDGEIVNVKTQPGTDYGSKVVEVIGRVEDSETIREFKTTLFGDNFDLDVYDQFVQLSQTKYKHLF 112          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVA2_ECTSI1.890e-7499.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A024UW39_9STRA4.280e-2449.50Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A485KWY3_9STRA2.520e-2348.51Aste57867_12966 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XXL0_9STRA1.990e-2247.52Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1C3J4_PYTOL1.190e-1944.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484EA13_BRELC5.340e-1844.12Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
H3H303_PHYRM3.300e-1741.18Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0P1B2V0_PLAHL3.960e-1744.12Metal-dependent amidohydrolase 3 n=1 Tax=Plasmopar... [more]
A0A225WD33_9STRA1.330e-1642.16Uncharacterized protein n=9 Tax=Peronosporaceae Ta... [more]
D0N6F0_PHYIT1.330e-1640.20Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 1..108
e-value: 6.4E-30
score: 105.3
NoneNo IPR availablePANTHERPTHR15114FAMILY NOT NAMEDcoord: 3..106
IPR013970Replication factor A protein 3PFAMPF08661Rep_fac-A_3coord: 3..98
e-value: 5.5E-18
score: 65.2
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 3..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2747571..2753179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18295.1mRNA_Ecto-sp6_S_contig9.18295.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2747571..2753179 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18295.1 ID=prot_Ecto-sp6_S_contig9.18295.1|Name=mRNA_Ecto-sp6_S_contig9.18295.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=111bp
EFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQM
TAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDVFDLRKYDEAVSLMTGK
FSYLFYNPQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013970Rfa2
IPR012340NA-bd_OB-fold