prot_Ecto-sp6_S_contig9.18280.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18280.1
Unique Nameprot_Ecto-sp6_S_contig9.18280.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length171
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18280.1 vs. uniprot
Match: D7FVB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB7_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 1.370e-80
Identity = 137/142 (96.48%), Postives = 138/142 (97.18%), Query Frame = 0
Query:   29 MLHGGVTPRPASSSSHLQSVRVVGVAALRMAGGDGDAMSAAEETAKRLKEQAAALRESAAESEAEIRPASDKADEVTETPVPAVRPEDMPPKQKISSDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 170
            MLHGGVTPRPASSSSHL SVR VGV ALRMA GDGDAMSAAEETAKRLKEQAAALRESAAESEAEIRPASDKADEVTETPVPAVRPEDMPPKQKIS+DMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY
Sbjct:    1 MLHGGVTPRPASSSSHLHSVRAVGVGALRMADGDGDAMSAAEETAKRLKEQAAALRESAAESEAEIRPASDKADEVTETPVPAVRPEDMPPKQKISNDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 142          
BLAST of mRNA_Ecto-sp6_S_contig9.18280.1 vs. uniprot
Match: A0A7S2V2G0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.390e-14
Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   71 ETAKRLKEQAAALRESAAESEAEIRPASDKADEVTETPVPAVRPEDMPPKQKISSDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 170
            E A RLK + A   +  AE  A    A+    E  E  VP V+ ++  P + +S +M+ +LR+ELISQGADPNR++GNPIL+V  IIAVLVI GGQGIFY
Sbjct:   54 EEAARLKAEVAQFEKEKAEKMAAKAAAAPAKQE--EEVVPLVKNQEYKPTE-MSENMKNKLRRELISQGADPNRASGNPILIVGAIIAVLVIAGGQGIFY 150          
BLAST of mRNA_Ecto-sp6_S_contig9.18280.1 vs. uniprot
Match: A0A7S4D594_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D594_HETAK)

HSP 1 Score: 73.9 bits (180), Expect = 1.280e-13
Identity = 49/100 (49.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:   71 ETAKRLKEQAAALRESAAESEAEIRPASDKADEVTETPVPAVRPEDMPPKQKISSDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 170
            E AK+L EQAAALR  A   EAE + +   A         A+  E+  P+ +ISS M+++LR+EL +QGA+PN++A NPIL+++G+IAVLVI+ G GIFY
Sbjct:   52 EKAKKLAEQAAALRAEADAMEAEKKASMPAAXXXXXXXXXAM--EEELPRVEISSAMKEKLRRELEAQGANPNKAAANPILIISGVIAVLVILAGGGIFY 149          
BLAST of mRNA_Ecto-sp6_S_contig9.18280.1 vs. uniprot
Match: A0A836CMY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY3_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.500e-13
Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 0
Query:   73 AKRLKEQAAALRESAAESEAEIRPASDKADEVTETPVPAVRPEDMPPKQK-ISSDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 170
            A+RL +QAA LRE  A  E +    + KA+ V      A   E+   K+K +S  M+ +LR+ELISQGADPNRS+GN IL+VA +I VLV++GGQGIFY
Sbjct:   59 AQRLSDQAAKLREEIAAMEGDRPKPAPKAEPVQ---AKADAEEEAGFKEKELSEAMKAKLRKELISQGADPNRSSGNGILIVAAVIGVLVVLGGQGIFY 154          
BLAST of mRNA_Ecto-sp6_S_contig9.18280.1 vs. uniprot
Match: A0A0G4H860_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H860_VITBC)

HSP 1 Score: 64.3 bits (155), Expect = 6.410e-10
Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 0
Query:  120 KQKISSDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 170
            K +IS DM+KRL +EL  QGA+PN+S GNP L++  IIA LVI+GG+GIFY
Sbjct:  102 KPEISPDMKKRLLRELEGQGANPNKSRGNPYLIIFVIIAALVILGGKGIFY 152          
BLAST of mRNA_Ecto-sp6_S_contig9.18280.1 vs. uniprot
Match: W7TC08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TC08_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 6.660e-8
Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  116 DMPPKQKISSDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 170
            +MPP   +S +M+++L  E   QGAD N S GNPIL++A +I VLV++GG+G FY
Sbjct:   79 EMPPPTPLSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 133          
BLAST of mRNA_Ecto-sp6_S_contig9.18280.1 vs. uniprot
Match: A0A4D9CZL2_9STRA (Symplekin_C domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZL2_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.150e-5
Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 0
Query:  123 ISSDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 170
            +S +M+++L  E   QGAD N S GNPIL++A +I VLV++GG+G FY
Sbjct:  166 LSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 213          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FVB7_ECTSI1.370e-8096.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V2G0_9STRA2.390e-1451.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4D594_HETAK1.280e-1349.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CMY3_9STRA3.500e-1351.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4H860_VITBC6.410e-1062.75Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
W7TC08_9STRA6.660e-850.91Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CZL2_9STRA1.150e-552.08Symplekin_C domain-containing protein n=2 Tax=Nann... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..169
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.602
NoneNo IPR availableTMHMMTMhelixcoord: 147..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2616655..2619866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18280.1mRNA_Ecto-sp6_S_contig9.18280.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2615414..2619983 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18280.1 ID=prot_Ecto-sp6_S_contig9.18280.1|Name=mRNA_Ecto-sp6_S_contig9.18280.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=171bp
MLSMNALVASGLLAAFVGQTANAFVSPSMLHGGVTPRPASSSSHLQSVRV
VGVAALRMAGGDGDAMSAAEETAKRLKEQAAALRESAAESEAEIRPASDK
ADEVTETPVPAVRPEDMPPKQKISSDMQKRLRQELISQGADPNRSAGNPI
LVVAGIIAVLVIVGGQGIFY*
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