prot_Ecto-sp6_S_contig9.18274.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18274.1
Unique Nameprot_Ecto-sp6_S_contig9.18274.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length317
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18274.1 vs. uniprot
Match: D7FVC1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVC1_ECTSI)

HSP 1 Score: 586 bits (1510), Expect = 1.120e-210
Identity = 309/316 (97.78%), Postives = 310/316 (98.10%), Query Frame = 0 
Query:    1 MPGTVMGMLAAFRPFTTQKALLSMLTLSAALSIAWSVLAYEAWDLLHGTLDVSASVALRVAFYGTDFFLAATTFTLYTILAKFWADLAFSARQGAGASRPLGGGDEYRPRGTPTLIWKITRGVQRVSSTVVFAAAALATVLQAVLVTLDSKYLNLWTAYVEGGVFILAAFVMVTAAYYAVVELRLVPIELPTRRRRVSRVVAMTGSVAVCLVLRAVVLVWVAGKPIFVNTDLEMLALLGYWILLVALPSSIVLAYNRVVPLSSYSGGRGGTGNVSLRWTAPDEEEEEPLIPPGIATGTRFDGSNTFAGSRLPTVHS 316
            MPGTVM MLAAFRPFTTQKALLSMLTLSAALSIAWSVLAYEAWDLLHGTLDVS SVALRVAFYGTDFFLAATTFTLYTILAKFWADLAFSARQGAGASRPLGGGDEYRPRGTPTLIWKITRGVQRVSSTVVFAAAALATV QAVLVTLDS YLNLWTAYVEGGVFILAAFVMVTAAYYAVVELRLVPIELPTRRRRV RVVAMTGSVAVCLVLRAVVLVW AGKPIFVNTDLEMLALLGYW+LLVALPSSIVLAYNRVVPLSSYSGGRGGTGNVSLRWTAPDEEEEEPLIPPGIATGTRFDGSNTFAGSRLPTVHS
Sbjct:    1 MPGTVMAMLAAFRPFTTQKALLSMLTLSAALSIAWSVLAYEAWDLLHGTLDVSVSVALRVAFYGTDFFLAATTFTLYTILAKFWADLAFSARQGAGASRPLGGGDEYRPRGTPTLIWKITRGVQRVSSTVVFAAAALATVFQAVLVTLDSMYLNLWTAYVEGGVFILAAFVMVTAAYYAVVELRLVPIELPTRRRRVFRVVAMTGSVAVCLVLRAVVLVWAAGKPIFVNTDLEMLALLGYWVLLVALPSSIVLAYNRVVPLSSYSGGRGGTGNVSLRWTAPDEEEEEPLIPPGIATGTRFDGSNTFAGSRLPTVHS 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVC1_ECTSI1.120e-21097.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..157
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 256..316
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 223..233
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..222
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..125
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 237..259
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2579461..2582185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18274.1mRNA_Ecto-sp6_S_contig9.18274.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2579461..2591732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18274.1 ID=prot_Ecto-sp6_S_contig9.18274.1|Name=mRNA_Ecto-sp6_S_contig9.18274.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=317bp
MPGTVMGMLAAFRPFTTQKALLSMLTLSAALSIAWSVLAYEAWDLLHGTL
DVSASVALRVAFYGTDFFLAATTFTLYTILAKFWADLAFSARQGAGASRP
LGGGDEYRPRGTPTLIWKITRGVQRVSSTVVFAAAALATVLQAVLVTLDS
KYLNLWTAYVEGGVFILAAFVMVTAAYYAVVELRLVPIELPTRRRRVSRV
VAMTGSVAVCLVLRAVVLVWVAGKPIFVNTDLEMLALLGYWILLVALPSS
IVLAYNRVVPLSSYSGGRGGTGNVSLRWTAPDEEEEEPLIPPGIATGTRF
DGSNTFAGSRLPTVHS*
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