prot_Ecto-sp6_S_contig9.18234.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18234.1
Unique Nameprot_Ecto-sp6_S_contig9.18234.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length374
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18234.1 vs. uniprot
Match: D7FVF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVF6_ECTSI)

HSP 1 Score: 683 bits (1763), Expect = 2.580e-247
Identity = 358/373 (95.98%), Postives = 361/373 (96.78%), Query Frame = 0
Query:    1 MQRGCSAGPGRSESTRSSTAAEAPSARQGGSNRYGAAEDEEVPAWKRQLSFRGQPYRYAHHQNGVMGHFQIRVVAASEISEPDWSRVTSNLNINAIAGNGSGTGSALPYVAVSLGKYTVRSSAREAQPDSLGTLRASWPRGMLLVEVMKGDIRPGELPRLAVQVFNQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSGGAHLIDTWVELEPKGRVHVHVEYEPKGIQPEKNDVVFLESFARWGDSLVIPPGVPMVVLDSKPPFLLVAFDTFTGREGRLRLHRNTVSVVERLSWLDVSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIVMVTPLQASLLVAFSALKVALKGVLMGTHAVYQEAVVNN 373
            MQRGCSAGP RSESTRSSTAAEAPSARQGGSNRYGAAEDEEVPAWKRQLSFRGQPYRYAHHQNGVMGHFQIRVVAASEISEPDWSRVTSNLNINAI        SALPYVAVSLGK TVRSSAREAQPDSLGTLRASWPRGML VEVMKGDIRPGELPRLAVQV+NQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSGGAHLIDTWVELEPKGRVHVHVEYEPKGIQPEKNDVVFLESFARWGDSLVIPPGVPMVVLDSKPPFLLVAFDTFTGREGRLRLHRNTVS+VERLSWLDVSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIV+V PLQASLLVAFSALKVALKGVLMGTHAVYQEAVVNN
Sbjct:    1 MQRGCSAGPNRSESTRSSTAAEAPSARQGGSNRYGAAEDEEVPAWKRQLSFRGQPYRYAHHQNGVMGHFQIRVVAASEISEPDWSRVTSNLNINAIXXXXXXXXSALPYVAVSLGKCTVRSSAREAQPDSLGTLRASWPRGMLSVEVMKGDIRPGELPRLAVQVYNQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSGGAHLIDTWVELEPKGRVHVHVEYEPKGIQPEKNDVVFLESFARWGDSLVIPPGVPMVVLDSKPPFLLVAFDTFTGREGRLRLHRNTVSLVERLSWLDVSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIVIVAPLQASLLVAFSALKVALKGVLMGTHAVYQEAVVNN 373          
BLAST of mRNA_Ecto-sp6_S_contig9.18234.1 vs. uniprot
Match: A0A7S1UJC0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJC0_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.810e-39
Identity = 109/375 (29.07%), Postives = 175/375 (46.67%), Query Frame = 0
Query:   38 EDEEVPAWKRQLSFRGQPYRYAHHQNGVMGHFQIRVVAASEISEPDWSRV---TSNLNINAIAGNGSGTGSALPYVAVSLGKYTVRSSAREAQPDSLGTLRAS----WPRGMLLVEVMKGDIRPGELPRLAVQVFNQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSGGAHLIDTWVELEP---------KGR----------------------VHVHVEYEPKGIQPEKNDVVFLESFARWGDSLVIPPGVPMVVLDSKPPFLLVAFDT-FTGREGRLRLHRNTVSVVERLSWLDVSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIVMVTPLQASLLVAFSALKVALKGVLMGTHAVYQEAVVNN 373
            ED+  P W   +S+RG  YRY  HQ  VMG    RVV A  +   DWS +    S  N+N             PYV +S+G            P   G +R +    W     ++ V+K  +R G    L VQ F+ +++V  VL + ++       + LG G++++S+LL G A ++D WV L+          KG                       VH+ VEYEP+G+ P++ D+V+LE FAR   + +IPPG PM V++    + LV F + ++  + +L++HRN + VVERL+ +D        P D L  T  G +  R + P +  +  ++ P+  +  V    +++A++    G  A     V N+
Sbjct:   16 EDQPAPRWVSNMSYRGNAYRYLDHQQNVMGTVHARVVEAKNLRRLDWSYLQPLASAQNVN-------------PYVKLSMG-----GDEEIRMPICTGVVRGNCNPTWVSEKFILPVLKSAVRSGIAVTLDVQAFHSENVVARVLPNMITG-----NNSLGLGQVELSALLLGEAQVLDVWVPLQTGAHSKVKGGKGEESKDEPRPGAPLQPVVDEFAPAVHIVVEYEPEGLHPQRGDIVYLEPFARSPVNQIIPPGEPMAVIEMSGSYALVGFQSGYSEFKCQLKIHRNAIFVVERLTLVDGIWKSALAPTDYLFGTRVGRFVRRTTGPYVSYVNTLLAPVYFASNVGIGTVRLAVRSAAAGVAATGSTVVGND 367          
BLAST of mRNA_Ecto-sp6_S_contig9.18234.1 vs. uniprot
Match: W7TJW2_9STRA (C2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJW2_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.040e-35
Identity = 107/330 (32.42%), Postives = 158/330 (47.88%), Query Frame = 0
Query:   41 EVPAWKRQLSFRGQPYRYAHHQNGVMGHFQIRVVAASEISEPDWSRVTSNLNINAIAGNGSGTGSALPYVAVSLGKYTVRSSA--REAQPDSLGTLRASWPRGMLLVEVMKGDIRPGELPRLAVQVFNQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSG--GAHLIDTWVELEP-KGRVHVHVEYEPKGIQPEKNDVVFLESFARWGDSLVIPPGVPMVVLDSKPPFLLVAFDTFTGREGR---------LRLHRNTVSVVERLSWLDVSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIVMVTPLQASLLVAFSALKVALK 356
            + P W+ +++ R  PYRY  HQ G +G   IR++   ++                  G    + S  P V + +     RSS   R A P        SW     +  + KG ++ G    +  Q  +         +S  S + GS+G  LG+G LD+  LL+G  G+H++D WV L P  GR+HV VEYEP G+ PE +DVVF E+FAR   SLV+P   PMVV      +LLV F T T R+ R         LR+HR TV V+ER + LD +   +    D +       W  ++ +P  +   V+  P   SL V F+A ++A++
Sbjct:   13 DAPIWRPEMAVRQNPYRYLDHQKGTIGILDIRLIDGRDLDSTG-------------RGESGRSASVSPQVVIRVPAEEARSSVVPRNAHP--------SWQERFTM-NLKKGVLQEGAPVLVVFQALDA--------ASWRSPLGGSKGRDLGSGSLDILPLLNGSRGSHVMDEWVSLSPGPGRLHVVVEYEPVGMVPEMDDVVFFEAFARSPRSLVLPTNEPMVVRAVSGAYLLVGFRTPTARQARGPEAAPECRLRVHRQTVFVIERHTLLDAAWHSVIDAADMVQAVPPVRWAKKQLQPYAKYAQVLARPALTSLHVTFAAARLAMR 312          
BLAST of mRNA_Ecto-sp6_S_contig9.18234.1 vs. uniprot
Match: A0A1Z5J7T0_FISSO (C2 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7T0_FISSO)

HSP 1 Score: 90.1 bits (222), Expect = 3.780e-16
Identity = 88/336 (26.19%), Postives = 140/336 (41.67%), Query Frame = 0
Query:   45 WKRQLSFRGQPYRYAHHQNGVMGHFQIRVVAASEISEPDWSRVTSN----LNINAIAGNGSG-------TGSALPYVAVSLGKYTVRSSAREAQPDSLGTLRAS----------WPRGMLLVEVMKGDIRPGELPRLAVQVFNQDSI-VQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSGGAH-------LIDTWVEL-------------------------EPKGRVHVHVEYEPKGIQPEKNDVVFLESFARWGDSL-----VIPPGVPMVVLDSKPPFLLVAFD-TFTGREGR-LRLHRNTVSVVERLSWLDVSLAMLARPVDALLRTDTG 319
            W  ++SFR  PYR  HHQ G++G F++R++ AS +    WS +       L ++   GN S        T SA           + R  A  ++P        S          W        + KG +    +  L     N+DS  V++++   +S        LLG G LD++ L  G          +ID W+ +                         +  G V V V Y P G++P + D+V LE+FAR   S      ++PP  P+ V++ +  FLL  +  +  GR+   +RLHRN+V V+ER +  D +  +   P D ++ T  G
Sbjct:   26 WDGEVSFRDHPYRQLHHQRGIIGAFRVRLLEASNLKRSYWSPLAIGPVKLLGLSKAHGNVSSFCSFSLDTASAYDDNDSLAPSTSHRKPAPTSKPPPKRPTVVSPVIPENNNPVWDNFQFDFPLRKGFMAQDGMRLLLTVRVNEDSTPVETLMPGGLSD---GDARLLGMGSLDITDLCLGCTSEGDPVPGVIDAWIPISLPNKDRLLVSNEKNEDSNIIASSEQSTGMVRVLVSYGPSGLEPHEKDIVALEAFARRNPSTSSCRPLLPPLRPLTVVERRGAFLLCEYSLSDQGRKKAFVRLHRNSVFVIERQNLADAAHNLALLPFDVMMSTPMG 358          
BLAST of mRNA_Ecto-sp6_S_contig9.18234.1 vs. uniprot
Match: A0A1E7FW16_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW16_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.850e-13
Identity = 69/263 (26.24%), Postives = 115/263 (43.73%), Query Frame = 0
Query:  138 WPRGMLLVEVMKGDIRPGELPRLAVQVFNQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSGG---------AHLIDTWV------ELEPK----------------------------GRVHVHVEYEPKGIQPEKNDVVFLESFARWGDSL-----VIPPGVPMVVLDSKPPFLLVAF-----------------DTFTGREGRLRLHRNTVSVVERLSWLDVSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIV 335
            W      + + KG  + GE  R+ ++V    + +++++    S   G    LLG G LDV+ L  G            ++D WV      E E K                            GRV V + Y P G+ P++ND+V LE+FAR          +IPP +P+ V+D K P+LLV +                 +    R+  +R+HRN V V+ER + +D ++ ++ +P + +L T  G    R ++ ++ PLI+
Sbjct:  153 WADCQFELPLHKGAFQDGEPVRIFLRVEEDSTPLENMIPGIASA--GGVARLLGVGHLDVTKLCLGQHPITGLPVTEEVMDAWVPIKLPDEQEQKPFIALGAPDDELKKPSYPIKGDKANGMGGRVRVLITYHPHGMNPQRNDIVALEAFARQNLRTATCHSIIPPFLPLHVIDVKEPWLLVKYRLPFETDNNNMYNHGMNENDDDRKACMRIHRNAVFVIERKNLMDAAMNIVLQPAEFVLSTPLG----RSAQDIMGPLII 409          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVF6_ECTSI2.580e-24795.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1UJC0_9STRA3.810e-3929.07Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TJW2_9STRA2.040e-3532.42C2 domain-containing protein n=3 Tax=Monodopsidace... [more]
A0A1Z5J7T0_FISSO3.780e-1626.19C2 domain-containing protein n=2 Tax=Fistulifera s... [more]
A0A1E7FW16_9STRA3.850e-1326.24Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 64..229
e-value: 2.9E-8
score: 35.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 329..351
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 352..373
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..328
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 66..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2106727..2112236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18234.1mRNA_Ecto-sp6_S_contig9.18234.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2106727..2112886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18234.1 ID=prot_Ecto-sp6_S_contig9.18234.1|Name=mRNA_Ecto-sp6_S_contig9.18234.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=374bp
MQRGCSAGPGRSESTRSSTAAEAPSARQGGSNRYGAAEDEEVPAWKRQLS
FRGQPYRYAHHQNGVMGHFQIRVVAASEISEPDWSRVTSNLNINAIAGNG
SGTGSALPYVAVSLGKYTVRSSAREAQPDSLGTLRASWPRGMLLVEVMKG
DIRPGELPRLAVQVFNQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSL
LSGGAHLIDTWVELEPKGRVHVHVEYEPKGIQPEKNDVVFLESFARWGDS
LVIPPGVPMVVLDSKPPFLLVAFDTFTGREGRLRLHRNTVSVVERLSWLD
VSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIVMVTPLQASLLVAFSA
LKVALKGVLMGTHAVYQEAVVNN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf