prot_Ecto-sp6_S_contig9.18221.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18221.1
Unique Nameprot_Ecto-sp6_S_contig9.18221.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length108
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18221.1 vs. uniprot
Match: A0A6H5K4R6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 6.320e-9
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   32 KEPPAATQHEELVAYTNVFRVVDKTAPAENMRV 64
            K+PPAA QHEELVAYTNVFR VDKTAPAEN RV
Sbjct:  404 KDPPAAIQHEELVAYTNVFRAVDKTAPAENTRV 436          
BLAST of mRNA_Ecto-sp6_S_contig9.18221.1 vs. uniprot
Match: A0A6H5JUY1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY1_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 6.510e-9
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   32 KEPPAATQHEELVAYTNVFRVVDKTAPAENMRV 64
            K+PPAA QHEELVAYTNVFR VDKTAPAEN RV
Sbjct:  550 KDPPAAIQHEELVAYTNVFRAVDKTAPAENTRV 582          
BLAST of mRNA_Ecto-sp6_S_contig9.18221.1 vs. uniprot
Match: A0A6H5KGD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGD6_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 2.240e-8
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0
Query:   32 KEPPAATQHEELVAYTNVFRVVDKTAPAENMRV 64
            K+PP A QHEELVAYTNVFR VDKTAPAEN RV
Sbjct:  365 KDPPTAIQHEELVAYTNVFRAVDKTAPAENTRV 397          
BLAST of mRNA_Ecto-sp6_S_contig9.18221.1 vs. uniprot
Match: A0A6H5LFQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFQ8_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 4.050e-8
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0
Query:   32 KEPPAATQHEELVAYTNVFRVVDKTAPAENMRV 64
            K+PPAA QHEELVAYTNVFR VDK APAEN RV
Sbjct:  488 KDPPAAIQHEELVAYTNVFRAVDKIAPAENTRV 520          
BLAST of mRNA_Ecto-sp6_S_contig9.18221.1 vs. uniprot
Match: A0A6H5KTJ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ8_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.980e-7
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0
Query:   32 KEPPAATQHEELVAYTNVFRVVDKTAPAENMRV 64
            K+PPAA QH+ELVAYTN+ R VDKTAPAEN RV
Sbjct:  389 KDPPAAIQHKELVAYTNILRAVDKTAPAENTRV 421          
BLAST of mRNA_Ecto-sp6_S_contig9.18221.1 vs. uniprot
Match: A0A6H5JV83_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV83_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 3.840e-5
Identity = 24/26 (92.31%), Postives = 24/26 (92.31%), Query Frame = 0
Query:   39 QHEELVAYTNVFRVVDKTAPAENMRV 64
            QHEELVAYTNVFR VDKTAPAEN RV
Sbjct:  129 QHEELVAYTNVFRAVDKTAPAENTRV 154          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K4R6_9PHAE6.320e-987.88Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUY1_9PHAE6.510e-987.88Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KGD6_9PHAE2.240e-884.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LFQ8_9PHAE4.050e-884.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTJ8_9PHAE1.980e-778.79Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV83_9PHAE3.840e-592.31Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1985029..1987344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18221.1mRNA_Ecto-sp6_S_contig9.18221.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1985029..1987344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18221.1 ID=prot_Ecto-sp6_S_contig9.18221.1|Name=mRNA_Ecto-sp6_S_contig9.18221.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=108bp
MPRRASRMELFGEVVGLRHGSFAFWWTFVLGKEPPAATQHEELVAYTNVF
RVVDKTAPAENMRVCTWIPPLPGTTTTSVEPRTEGVAREMRNVHVGEVAD
AKPPEVE*
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