prot_Ecto-sp6_S_contig9.18200.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig9.18200.1
Unique Name	prot_Ecto-sp6_S_contig9.18200.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	677

Homology

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BLAST of mRNA_Ecto-sp6_S_contig9.18200.1 vs. uniprot
Match: A0A6H5KJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ42_9PHAE)

HSP 1 Score: 730 bits (1885), Expect = 4.880e-256
Identity = 523/687 (76.13%), Postives = 531/687 (77.29%), Query Frame = 0

Query:    1 MEDPSEEVALASTASPSPIPPPPGRDPSPNTPRQCFRMESLATLTAPLDAESTARAARTRSSRLPPNRTYASTSANRVGHGDIIEEEKLPIPDKRQLESWARYGFVDTELLLQAAVQPQGGRKAAALSEGLAIVEEEQGGDVSRSLVRMGAAAEEAGDGLQEVLGERKENDHHPPASRSPTTT-----------HESTPATADGERRRPEGGAEGDISLAVGSSTPLTDTMTPSSQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEANQGSRAGSSRRAAQTKAEIERHKRNRAERLRAYGCQRTLYPRIVPGGGVEGGSDNHSTPARETEEMETEEWVNTLRVSAAIRGESLMAACSQSFAEHKTNTLLGDKKSEARASRTADVSVMEGPDGLLHCAVLRGDHALAARAAQFLVDKRGSNVNSRDEWGRTPLHTAAGKGMVAMARFFIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTRIEVGARYDIKDKRGHLAGEYFWESVDSETRDEIVAILVACGWPHPPXXXRNNSRLRGRGSXXXXSSGRHGGQRGRSTSAPPSRTASPRNDRGGAXXXXNGRAKRHSDGGEAGMKRLASDMMMLMKRR 676
            MED SEEVALASTASPSP+PPPPGRDPS  TPRQCFR ESLATLTAPLDAESTARAARTR SRLPPNR YAST+ N +GHGD  EEEKLPIPDKRQLESWARYGFVD ELLL AA QPQGGR                     RS                                                 HESTPATADGERRRPEGGAE DISLAVGSSTPLTDTMTPSSQE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXX                    XXX             QEANQGSRAGSSRRAAQTKAEIERHKRNRAERLRAYGCQR+LYPRIVPG  VEGG DN+STPARETEEMETEEWVNTLRVSAAIRGESLMAACSQSFAEH TNTLLGDK+SEARASRTADVSVMEGPDGLLHCAVLRGDHALAARAAQFLVDKRGSNVNSRDEWGRTPLHTAAGKGMVAMARFFIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTRIEVGARYDIKDKRGHLAGEYFWESV+ ETRDEIVAIL ACGWPHPP   RN SRLRGRG     S GRHGGQR RS SAPPSRTASPRNDRGGA    +GRAK HSDGGEAGMKRLASDMMMLMKRR
Sbjct:    1 MEDLSEEVALASTASPSPMPPPPGRDPSATTPRQCFRAESLATLTAPLDAESTARAARTRCSRLPPNRAYASTTVNSLGHGDN-EEEKLPIPDKRQLESWARYGFVDAELLLLAADQPQGGRXXXXXXXXXXXXXXXXXXXXGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHESTPATADGERRRPEGGAERDISLAVGSSTPLTDTMTPSSQERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPAGGLDSMAASLXXXXXXXXXXXXXXXXXXXXTKEVELAELTQQEEREADVAXXXTVAQ---------QEANQGSRAGSSRRAAQTKAEIERHKRNRAERLRAYGCQRSLYPRIVPGRVVEGGLDNYSTPARETEEMETEEWVNTLRVSAAIRGESLMAACSQSFAEHTTNTLLGDKQSEARASRTADVSVMEGPDGLLHCAVLRGDHALAARAAQFLVDKRGSNVNSRDEWGRTPLHTAAGKGMVAMARFFIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTRIEVGARYDIKDKRGHLAGEYFWESVEPETRDEIVAILAACGWPHPPPPPRNISRLRGRG-LGRGSCGRHGGQRERSPSAPPSRTASPRNDRGGAGGGGHGRAKTHSDGGEAGMKRLASDMMMLMKRR 676

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BLAST of mRNA_Ecto-sp6_S_contig9.18200.1 vs. uniprot
Match: D8LH02_ECTSI (Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH02_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 2.080e-140
Identity = 264/278 (94.96%), Postives = 264/278 (94.96%), Query Frame = 0

Query:  399 METEEWVNTLRVSAAIRGESLMAACSQSFAEHKTNTLLGDKKSEARASRTADVSVMEGPDGLLHCAVLRGDHALAARAAQFLVDKRGSNVNSRDEWGRTPLHTAAGKGMVAMARFFIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTRIEVGARYDIKDKRGHLAGEYFWESVDSETRDEIVAILVACGWPHPPXXXRNNSRLRGRGSXXXXSSGRHGGQRGRSTSAPPSRTASPRNDRGGAXXXXNGRAKRHSDGGEAGMKRLASDMMMLMKRR 676
            METEEWVNTLRVSAAIRGESLMAACSQSFAEHKTNTLLGDKKSEARASRTADVSVMEGPDGLLHCAVLRGDHALAARAAQFLVDKRGSNVNSRDEWGRTPLHTAAGKGMVAMARFFIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTRIEVGARYDIKDKRGHLAGEYFW SVD ETRDEIVAILVACGWPHPPXXX     LR    XX  SSGRHGGQRGRSTSAPPSRTASPRNDRGGA XXXNGRAKRHSDGGEAGMKRLASDMMMLMKRR
Sbjct:    1 METEEWVNTLRVSAAIRGESLMAACSQSFAEHKTNTLLGDKKSEARASRTADVSVMEGPDGLLHCAVLRGDHALAARAAQFLVDKRGSNVNSRDEWGRTPLHTAAGKGMVAMARFFIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTRIEVGARYDIKDKRGHLAGEYFWGSVDPETRDEIVAILVACGWPHPPXXXXXXXXLRXX-XXXRGSSGRHGGQRGRSTSAPPSRTASPRNDRGGAGXXXNGRAKRHSDGGEAGMKRLASDMMMLMKRR 277

[Close]

BLAST of mRNA_Ecto-sp6_S_contig9.18200.1 vs. uniprot
Match: D8LH03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH03_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 9.140e-127
Identity = 294/370 (79.46%), Postives = 295/370 (79.73%), Query Frame = 0

Query:    1 MEDPSEEVALASTASPSPIPPPPGRDPSPNTPRQCFRMESLATLTAPLDAESTARAARTRSSRLPPNRTYASTSANRVGHGDIIEEEKLPIPDKRQLESWARYGFVDTELLLQAAVQPQGGRKAAALSEGLAIVEEEQGGDVSRSLVRMGAAAEEAGDGLQEVLGERKENDHHPPASRSPTTTHESTPATADGERRRPEGGAEGDISLAVGSSTPLTDTMTPSSQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEANQGSRAGSSRRAAQTKAEIERHKRNRAERLRAYGCQR 370
            MED SEEVALASTASPSPIPPPPGRDPSPNTPRQCFRMESLATLTAPLDAESTARAARTRSSRLPPNRTYASTSA RVGHGDIIEEEKLPIPDKRQLESWARYGFVDTELLLQAAVQPQGGRKAAALSEGLAIVEEEQGGDVSRSLVRMGAAAEEAGDGLQEVLGERKENDH                         PEGGAEGDISLA+GSSTPLTDTMTPSSQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                               QEANQGSRAGSSRRAAQTKAEIERHKRNRAERLRAYGCQR
Sbjct:    1 MEDTSEEVALASTASPSPIPPPPGRDPSPNTPRQCFRMESLATLTAPLDAESTARAARTRSSRLPPNRTYASTSAIRVGHGDIIEEEKLPIPDKRQLESWARYGFVDTELLLQAAVQPQGGRKAAALSEGLAIVEEEQGGDVSRSLVRMGAAAEEAGDGLQEVLGERKENDHXXXXXXXXXXXXXXXXXXXXXXXXXPEGGAEGDISLAIGSSTPLTDTMTPSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------QEANQGSRAGSSRRAAQTKAEIERHKRNRAERLRAYGCQR 323

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig9.18200.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig9.18200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KJ42_9PHAE	4.880e-256	76.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LH02_ECTSI	2.080e-140	94.96	Ankyrin domain protein n=1 Tax=Ectocarpus siliculo...	[more]
D8LH03_ECTSI	9.140e-127	79.46	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 295..319
None	No IPR available	PANTHER	PTHR24180	FAMILY NOT NAMED	coord: 457..563
None	No IPR available	PANTHER	PTHR24180:SF15	26S PROTEASOME REGULATORY SUBUNIT P28-RELATED	coord: 457..563
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 527..560 e-value: 9.0 score: 15.2 coord: 494..523 e-value: 0.002 score: 27.4
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 494..526 score: 13.464
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 461..560 e-value: 1.5E-11 score: 44.7
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 461..561 score: 22.278
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 395..608 e-value: 5.5E-26 score: 93.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 459..573

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig9	contig	Ecto-sp6_S_contig9:1817272..1827298 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig9.18200.1	mRNA_Ecto-sp6_S_contig9.18200.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig9 1817272..1827298 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18200.1 ID=prot_Ecto-sp6_S_contig9.18200.1|Name=mRNA_Ecto-sp6_S_contig9.18200.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=677bp
MEDPSEEVALASTASPSPIPPPPGRDPSPNTPRQCFRMESLATLTAPLDA
ESTARAARTRSSRLPPNRTYASTSANRVGHGDIIEEEKLPIPDKRQLESW
ARYGFVDTELLLQAAVQPQGGRKAAALSEGLAIVEEEQGGDVSRSLVRMG
AAAEEAGDGLQEVLGERKENDHHPPASRSPTTTHESTPATADGERRRPEG
GAEGDISLAVGSSTPLTDTMTPSSQERRRDNTTASADAAAGISTVSNKGS
SSQTTAKTSRTPAGGLDSMAASLLASSAAAAAAASSAASQEAARGKEEEE
EQETKEDELAELKQQEEREAAVAAAATVAQQEANQGSRAGSSRRAAQTKA
EIERHKRNRAERLRAYGCQRTLYPRIVPGGGVEGGSDNHSTPARETEEME
TEEWVNTLRVSAAIRGESLMAACSQSFAEHKTNTLLGDKKSEARASRTAD
VSVMEGPDGLLHCAVLRGDHALAARAAQFLVDKRGSNVNSRDEWGRTPLH
TAAGKGMVAMARFFIRRGADVDALDQDDRTPLFFACASGNTTVARYLTRI
EVGARYDIKDKRGHLAGEYFWESVDSETRDEIVAILVACGWPHPPPPPRN
NSRLRGRGSGRGSSSGRHGGQRGRSTSAPPSRTASPRNDRGGAGGGGNGR
AKRHSDGGEAGMKRLASDMMMLMKRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf